Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g27542 Brassica carinata HOM05D004896 ORTHO05D006447 1.4e-176 622.9 321 100.0
C04p47490 Brassica napus HOM05D004896 ORTHO05D006447 9.8e-170 600.1 325 96.9
A04p13700 Brassica napus HOM05D004896 ORTHO05D006447 2.9e-169 598.6 325 96.6
BolC4t26350H Brassica oleracea HOM05D004896 ORTHO05D006447 2.9e-169 598.6 325 96.6
BraA04t17030Z Brassica rapa HOM05D004896 ORTHO05D006447 2.9e-169 598.6 325 96.6
AL7G49080 Arabidopsis lyrata HOM05D004896 ORTHO05D006447 1.3e-158 563.1 330 89.7
AT5G40660 Arabidopsis thaliana HOM05D004896 ORTHO05D006447 1.1e-157 560.1 327 89.0
CARHR261290 Cardamine hirsuta HOM05D004896 ORTHO05D006447 1.6e-156 556.2 323 88.9
Thhalv10027828m.g Eutrema salsugineum HOM05D004896 ORTHO05D006447 1.1e-155 553.5 332 88.9
Sp7g01200 Schrenkiella parvula HOM05D004896 ORTHO05D006447 1.1e-155 553.5 329 89.7
Carub.0007s3482 Capsella rubella HOM05D004896 ORTHO05D006447 2.0e-154 549.3 325 88.3
Aa31LG9G960 Aethionema arabicum HOM05D004896 ORTHO05D006447 2.9e-145 518.8 326 83.1
THA.LOC104825307 Tarenaya hassleriana HOM05D004896 ORTHO05D006447 7.8e-135 484.2 325 77.8
Cpa.g.sc130.54 Carica papaya HOM05D004896 ORTHO05D006447 2.5e-125 452.6 324 72.8
Manes.15G155100 Manihot esculenta HOM05D004896 ORTHO05D006447 4.2e-120 435.3 331 70.4
Gohir.A05G342400 Gossypium hirsutum HOM05D004896 ORTHO05D006447 1.2e-119 433.7 332 69.6
Gorai.012G091200 Gossypium raimondii HOM05D004896 ORTHO05D006447 1.2e-119 433.7 332 69.6
PGR142G1575 Punica granatum HOM05D004896 ORTHO05D006447 1.6e-119 433.3 330 69.4
CsaV3_3G027540 Cucumis sativus L. HOM05D004896 ORTHO05D006447 2.7e-119 432.6 307 71.0
ClCG05G013000 Citrullus lanatus HOM05D004896 ORTHO05D006447 4.6e-119 431.8 333 68.5
Ciclev10015882m.g Citrus clementina HOM05D004896 ORTHO05D006447 1.8e-118 429.9 334 68.0
COL.COLO4_29242 Corchorus olitorius HOM05D004896 ORTHO05D006447 1.9e-117 426.4 332 68.4
Phvul.008G145713 Phaseolus vulgaris HOM05D004896 ORTHO05D006447 1.9e-117 426.4 307 72.3
Sed0025595 Sechium edule HOM05D004896 ORTHO05D006447 1.3e-116 423.7 323 68.1
GSVIVG01003974001 Vitis vinifera HOM05D004896 ORTHO05D006447 1.3e-116 423.7 302 71.9
QL02p073334 Quercus lobata HOM05D004896 ORTHO05D006447 2.1e-116 422.9 317 67.8
RcHm_v2.0_Chr2g0173821 Rosa chinensis HOM05D004896 ORTHO05D006447 2.8e-116 422.5 333 67.0
Eucgr.I01701 Eucalyptus grandis HOM05D004896 ORTHO05D006447 4.8e-116 421.8 270 77.4
Duzib264G0232 Durio zibethinus HOM05D004896 ORTHO05D006447 1.1e-115 420.6 334 68.0
Psat3g168560 Pisum sativum HOM05D004896 ORTHO05D006447 1.1e-115 420.6 301 72.4
Prupe.3G298100 Prunus persica HOM05D004896 ORTHO05D006447 1.1e-115 420.6 336 66.1
Thecc.04G026600 Theobroma cacao HOM05D004896 ORTHO05D006447 1.1e-115 420.6 336 67.6
MD09G1019000 Malus domestica HOM05D004896 ORTHO05D006447 1.8e-115 419.9 338 65.7
CANSAT64G0177 Cannabis sativa HOM05D004896 ORTHO05D006447 2.4e-115 419.5 338 66.0
Glyma.16G066000 Glycine max HOM05D004896 ORTHO05D006447 3.1e-115 419.1 295 72.2
FAN02G3298 Fragaria x ananassa HOM05D004896 ORTHO05D006447 6.9e-115 417.9 317 68.5
Ca_03861_v3 Cicer arietinum L. HOM05D004896 ORTHO05D006447 1.5e-114 416.8 284 73.6
TAR629G1306 Trochodendron aralioides HOM05D004896 ORTHO05D006447 1.5e-114 416.8 335 66.6
TWI56G0223 Tripterygium wilfordii HOM05D004896 ORTHO05D006447 3.4e-114 415.6 312 69.2
FvH4_6g52290 Fragaria vesca HOM05D004896 ORTHO05D006447 4.5e-114 415.2 335 65.7
arahy.Tifrunner.gnm1.ann1.10VWGS Arachis hypogaea HOM05D004896 ORTHO05D006447 5.8e-114 414.8 271 76.4
arahy.Tifrunner.gnm1.ann1.5ILH08 Arachis hypogaea HOM05D004896 ORTHO05D006447 5.8e-114 414.8 271 76.4
FAN05G4015 Fragaria x ananassa HOM05D004896 ORTHO05D006447 7.6e-114 414.5 335 65.4
FAN14G4168 Fragaria x ananassa HOM05D004896 ORTHO05D006447 7.6e-114 414.5 335 65.7
Cfa007299 Carpinus fangiana HOM05D004896 ORTHO05D006447 1.0e-113 414.1 297 70.0
FAN09G1675 Fragaria x ananassa HOM05D004896 ORTHO05D006447 1.0e-113 414.1 333 64.6
MBI19_g04325_MAGBIO Magnolia biondii HOM05D004896 ORTHO05D006447 1.0e-113 414.1 296 70.6
VMungo1080G0372 Vigna mungo HOM05D004896 ORTHO05D006447 1.7e-113 413.3 296 71.3
Nn5g27187 Nelumbo nucifera HOM05D004896 ORTHO05D006447 2.2e-113 412.9 328 67.7
Hma1.2p1_1484F.1_g286400 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 4.9e-113 411.8 300 71.0
Actinidia18427 Actinidia chinensis HOM05D004896 ORTHO05D006447 6.5e-113 411.4 341 66.0
Lj7A604T65 Lonicera japonica HOM05D004896 ORTHO05D006447 1.9e-112 409.8 312 68.6
CAN.G473.48 Capsicum annuum HOM05D004896 ORTHO05D006447 2.5e-112 409.5 331 66.8
Hma1.2p1_1407F.1_g281400 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 2.5e-112 409.5 303 70.0
Aqoxy1G02023 Aquilegia oxysepala HOM05D004896 ORTHO05D006447 7.1e-112 407.9 312 68.6
Gohir.D04G080440 Gossypium hirsutum HOM05D004896 ORTHO05D006447 7.1e-112 407.9 316 68.7
Nitab4.5_0002158g0160 Nicotiana tabacum HOM05D004896 ORTHO05D006447 7.1e-112 407.9 335 65.1
Lj1g0027814 Lotus japonicus HOM05D004896 ORTHO05D006447 9.3e-112 407.5 303 70.3
Solyc02g093690.3 Solanum lycopersicum HOM05D004896 ORTHO05D006447 9.3e-112 407.5 339 63.7
Migut.H00045 Erythranthe guttata HOM05D004896 ORTHO05D006447 1.6e-111 406.8 331 64.0
Sopen02g038330 Solanum pennellii HOM05D004896 ORTHO05D006447 1.6e-111 406.8 340 63.2
MSTRG.3120 Avicennia marina HOM05D004896 ORTHO05D006447 2.1e-111 406.4 337 64.1
CSS0017957 Camellia sinensis var. sinensis HOM05D004896 ORTHO05D006447 2.1e-111 406.4 307 67.8
Ca_01399_v3 Cicer arietinum L. HOM05D004896 ORTHO05D006447 2.7e-111 406.0 280 72.9
vmacro18309 Vaccinium macrocarpon HOM05D004896 ORTHO05D006447 2.7e-111 406.0 250 78.8
Hma1.2p1_0383F.1_g140290 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 4.6e-111 405.2 300 70.3
Rhsim08G0046600 Rhododendron simsii HOM05D004896 ORTHO05D006447 6.0e-111 404.8 290 72.1
Nitab4.5_0001031g0180 Nicotiana tabacum HOM05D004896 ORTHO05D006447 7.9e-111 404.4 335 64.5
ECA246G3787 Erigeron canadensis HOM05D004896 ORTHO05D006447 1.0e-110 404.1 283 70.7
PGSC0003DMG400012644 Solanum tuberosum HOM05D004896 ORTHO05D006447 1.8e-110 403.3 340 62.6
SGA_v2.0_scaffold135G34930 Striga asiatica HOM05D004896 ORTHO05D006447 3.0e-110 402.5 306 66.7
Medtr0018s0290 Medicago truncatula HOM05D004896 ORTHO05D006447 3.9e-110 402.1 324 66.4
Ah.12g059440 Amaranthus hybridus HOM05D004896 ORTHO05D006447 5.1e-110 401.7 327 63.9
Lalb_Chr14g0362991 Lupinus albus HOM05D004896 ORTHO05D006447 2.5e-109 399.4 274 71.9
TPR.G1112 Trifolium pratense HOM05D004896 ORTHO05D006447 3.3e-109 399.1 281 71.9
HanXRQChr17g0549471 Helianthus annuus HOM05D004896 ORTHO05D006447 5.7e-109 398.3 273 72.5
AUR62030697 Chenopodium quinoa HOM05D004896 ORTHO05D006447 1.3e-108 397.1 252 77.4
Haze_14796 Corylus avellana HOM05D004896 ORTHO05D006447 1.3e-108 397.1 284 70.1
DCAR_021752 Daucus carota HOM05D004896 ORTHO05D006447 1.6e-108 396.7 301 69.1
EL10Ac5g10496 Beta vulgaris HOM05D004896 ORTHO05D006447 4.8e-108 395.2 321 63.9
AUR62036338 Chenopodium quinoa HOM05D004896 ORTHO05D006447 6.3e-108 394.8 252 77.4
EL10Ac9g21007 Beta vulgaris HOM05D004896 ORTHO05D006447 1.1e-107 394.0 321 63.6
Potri.001G338200 Populus trichocarpa HOM05D004896 ORTHO05D006447 1.1e-107 394.0 330 63.9
Lsat_1_v5_gn_0_30781 Lactuca sativa HOM05D004896 ORTHO05D006447 1.8e-107 393.3 334 62.6
ATR0099G063 Amborella trichopoda HOM05D004896 ORTHO05D006447 3.1e-107 392.5 252 74.2
CiPaw.03G049000 Carya illinoinensis HOM05D004896 ORTHO05D006447 5.3e-107 391.7 314 65.9
Hund14985 Selenicereus undatus HOM05D004896 ORTHO05D006447 6.9e-107 391.3 330 63.6
Cc07_g00300 Coffea canephora HOM05D004896 ORTHO05D006447 1.2e-106 390.6 254 74.4
PSO541G0959 Papaver somniferum HOM05D004896 ORTHO05D006447 6.5e-105 384.8 304 64.1
Dinv33394 Davidia involucrata HOM05D004896 ORTHO05D006447 2.5e-104 382.9 296 66.2
CSS0036459 Camellia sinensis var. sinensis HOM05D004896 ORTHO05D006447 4.2e-104 382.1 359 57.9
FvH4_6g52310 Fragaria vesca HOM05D004896 ORTHO05D006447 7.2e-104 381.3 250 74.0
CiPaw.04G032200 Carya illinoinensis HOM05D004896 ORTHO05D006447 1.2e-103 380.6 294 67.7
PSO675G8471 Papaver somniferum HOM05D004896 ORTHO05D006447 1.6e-103 380.2 314 63.4
CDE07G0249 Ceratophyllum demersum HOM05D004896 ORTHO05D006447 2.7e-103 379.4 292 65.8
MELO3C014823.2 Cucumis melo HOM05D004896 ORTHO05D006447 1.0e-102 377.5 274 69.7
Zm00001eb329190 Zea mays HOM05D004896 ORTHO05D006447 1.4e-102 377.1 270 70.0
HPP92_020467 Vanilla planifolia HOM05D004896 ORTHO05D006447 3.0e-102 375.9 306 65.0
unitig_0.g536 Utricularia gibba HOM05D004896 ORTHO05D006447 3.9e-102 375.6 316 61.4
Os07g0644000 Oryza sativa ssp. japonica HOM05D004896 ORTHO05D006447 5.7e-101 371.7 256 71.5
Sabra16G0218900 Salix brachista HOM05D004896 ORTHO05D006447 4.1e-99 365.5 386 54.1
HPP92_026167 Vanilla planifolia HOM05D004896 ORTHO05D006447 2.6e-98 362.8 248 72.2
SHI03827 Sapria himalayana HOM05D004896 ORTHO05D006447 4.7e-95 352.1 273 65.2
Atru.chr6.2473 Acer truncatum HOM05D004896 ORTHO05D006447 1.5e-93 347.1 300 63.3
RcHm_v2.0_Chr2g0174241 Rosa chinensis HOM05D004896 ORTHO05D006447 7.4e-93 344.7 298 61.4
Sc03g0007130 Simmondsia chinensis HOM05D004896 ORTHO05D006447 2.2e-92 343.2 291 63.6
Peaxi162Scf00420g00251 Petunia axillaris HOM05D004896 ORTHO05D006447 2.0e-90 336.7 338 56.2
SEGI_10618 Sequoiadendron giganteum HOM05D004896 ORTHO05D006447 8.5e-89 331.3 301 57.5
FAN14G0298 Fragaria x ananassa HOM05D004896 ORTHO05D006447 4.7e-87 325.5 346 54.3
Oeu064389.1 Olea europaea HOM05D004896 ORTHO05D006447 2.9e-81 306.2 307 55.0
Sed0012039 Sechium edule HOM05D004896 ORTHO05D006447 9.7e-77 291.2 275 59.3
Atru.chr3.2666 Acer truncatum HOM05D004896 ORTHO05D006447 2.8e-76 289.7 234 64.1
SGA_v2.0_scaffold18G08247 Striga asiatica HOM05D004896 ORTHO05D006447 4.7e-71 272.3 315 51.4
SMO200G0187 Selaginella moellendorffii HOM05D004896 ORTHO05D006447 7.5e-61 238.4 238 51.7
Pp3c2_19250 Physcomitrium patens HOM05D004896 ORTHO05D006447 1.7e-60 237.3 254 47.6
Nitab4.5_0002158g0260 Nicotiana tabacum HOM05D002474 ORTHO05D007142 1.1e-56 224.6 207 61.4
MD17G1019600 Malus domestica HOM05D004896 ORTHO05D006447 4.3e-56 222.6 217 55.8
Mapoly0004s0068 Marchantia polymorpha HOM05D004896 ORTHO05D006447 7.3e-56 221.9 236 50.4
Hma1.2p1_1484F.1_g286430 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 9.5e-56 221.5 172 68.0
Actinidia16947 Actinidia chinensis HOM05D004896 ORTHO05D006447 4.7e-55 219.2 207 59.9
AagrBONN_evm.TU.Sc2ySwM_362.2811 Anthoceros agrestis HOM05D004896 ORTHO05D006447 1.2e-50 204.5 247 43.7
EL10Ac5g11826 Beta vulgaris HOM05D004896 ORTHO05D006447 2.0e-50 203.8 150 66.0
Atru.chr4.450 Acer truncatum HOM05D004896 ORTHO05D006447 1.3e-49 201.1 205 55.1
CBR_g4059 Chara braunii HOM05D004896 ORTHO05D006447 6.6e-49 198.7 247 43.3
Hma1.2p1_1484F.1_g286403 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 2.5e-48 196.8 127 76.4
Hma1.2p1_1484F.1_g286440 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 2.5e-48 196.8 127 76.4
AUR62030692 Chenopodium quinoa HOM05D004896 ORTHO05D006447 2.8e-47 193.4 109 84.4
Duzib147G0160 Durio zibethinus HOM05D004896 ORTHO05D006447 4.0e-46 189.5 125 76.0
Cc06_g20980 Coffea canephora HOM05D004896 ORTHO05D006447 8.3e-44 181.8 170 57.1
PRCOL_00001693 Prasinoderma coloniale HOM05D004896 ORTHO05D006447 7.8e-42 175.3 236 40.3
MCO13G572 Micromonas commoda HOM05D004896 ORTHO05D006447 8.1e-39 165.2 248 39.1
BcaC04g20647 Brassica carinata HOM05D004896 ORTHO05D006447 2.2e-36 157.1 90 90.0
C09p41080 Brassica napus HOM05D004896 ORTHO05D028223 2.2e-36 157.1 90 90.0
BolC9t56987H Brassica oleracea HOM05D004896 ORTHO05D028223 2.2e-36 157.1 90 90.0
MBI19_g02443_MAGBIO Magnolia biondii HOM05D004896 ORTHO05D006447 4.7e-31 139.4 91 72.5
Glyma.19G080702 Glycine max HOM05D004896 ORTHO05D006447 9.9e-29 131.7 100 65.0
Atru.chr11.190 Acer truncatum HOM05D004896 ORTHO05D006447 1.3e-28 131.3 116 60.3
Atru.chr7.121 Acer truncatum HOM05D005216 ORTHO05D006453 6.4e-28 129.0 102 67.6
BraA05t20477Z Brassica rapa HOM05D004896 ORTHO05D024046 7.1e-27 125.6 84 75.0
Atru.chr2.3725 Acer truncatum HOM05D004896 ORTHO05D006447 3.0e-25 120.2 66 86.4
Cre17.g726250 Chlamydomonas reinhardtii HOM05D004896 ORTHO05D006447 3.0e-25 120.2 215 34.4
Atru.chr1.36 Acer truncatum HOM05D004896 ORTHO05D006447 2.5e-24 117.1 65 84.6
CDE12G0511 Ceratophyllum demersum HOM05D004896 ORTHO05D006447 4.3e-24 116.3 76 72.4
Atru.chr2.563 Acer truncatum HOM05D004866 ORTHO05D005716 5.6e-24 115.9 65 84.6
BcaB01g05885 Brassica carinata HOM05D004896 ORTHO05D024046 2.4e-19 100.5 80 63.8
BolC7t42010H Brassica oleracea HOM05D004896 ORTHO05D028223 3.2e-19 100.1 52 92.3
A05p15620 Brassica napus HOM05D004896 ORTHO05D024046 6.0e-18 95.9 60 78.3
Atru.chr1.2050 Acer truncatum HOM05D004896 ORTHO05D006447 5.1e-17 92.8 77 64.9
BcaC01g04583 Brassica carinata HOM05D004896 ORTHO05D006447 4.3e-16 89.7 47 91.5
Ah.07g205180 Amaranthus hybridus HOM05D004896 ORTHO05D060504 2.4e-14 84.0 154 35.7
TAR628G1566 Trochodendron aralioides HOM05D004896 ORTHO05D006447 1.6e-10 71.2 51 64.7
Actinidia35788 Actinidia chinensis HOM05D004896 ORTHO05D006447 1.0e-09 68.6 45 77.8


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