Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g27524 Brassica carinata HOM05D007622 ORTHO05D009409 2.7e-61 238.4 117 100.0
A04p13550 Brassica napus HOM05D000285 ORTHO05D009409 6.1e-61 237.3 117 99.1
C04p47330 Brassica napus HOM05D000285 ORTHO05D009409 1.1e-59 233.0 117 98.3
BolC4t26334H Brassica oleracea HOM05D000285 ORTHO05D009409 1.1e-59 233.0 117 98.3
BraA04t17014Z Brassica rapa HOM05D000285 ORTHO05D009409 1.1e-59 233.0 117 98.3
Sp7g01380 Schrenkiella parvula HOM05D007622 ORTHO05D009409 1.2e-56 223.0 117 95.7
AT5G40500 Arabidopsis thaliana HOM05D007622 ORTHO05D009409 2.1e-53 212.2 124 85.5
Thhalv10027995m.g Eutrema salsugineum HOM05D007622 ORTHO05D009409 2.1e-53 212.2 117 89.7
AL7G49320 Arabidopsis lyrata HOM05D007622 ORTHO05D009409 3.6e-53 211.5 118 89.8
Carub.0007s3502 Capsella rubella HOM05D007622 ORTHO05D009409 6.7e-52 207.2 118 90.7
THA.LOC104805368 Tarenaya hassleriana HOM05D007622 ORTHO05D009409 5.0e-47 191.0 120 80.8
Ciclev10017228m.g Citrus clementina HOM05D007622 ORTHO05D009409 2.3e-39 165.6 119 68.1
MD17G1026500 Malus domestica HOM05D007622 ORTHO05D009409 2.3e-39 165.6 117 70.1
Prupe.3G292200 Prunus persica HOM05D007622 ORTHO05D009409 2.9e-39 165.2 98 78.6
Potri.001G344700 Populus trichocarpa HOM05D007622 ORTHO05D009409 2.5e-38 162.2 107 72.0
PGR083G1671 Punica granatum HOM05D007622 ORTHO05D009409 2.5e-38 162.2 118 69.5
Sed0017852 Sechium edule HOM05D007622 ORTHO05D009409 2.5e-38 162.2 114 68.4
Cc07_g01640 Coffea canephora HOM05D007622 ORTHO05D009409 4.2e-38 161.4 118 62.7
Sopen02g037920 Solanum pennellii HOM05D007622 ORTHO05D009409 4.2e-38 161.4 102 73.5
Aa31LG9G1100 Aethionema arabicum HOM05D001812 ORTHO05D001874 5.5e-38 161.0 100 81.0
GSVIVG01032401001 Vitis vinifera HOM05D007622 ORTHO05D009409 7.2e-38 160.6 114 71.1
Solyc02g093350.3 Solanum lycopersicum HOM05D007622 ORTHO05D009409 9.5e-38 160.2 102 72.5
PGSC0003DMG400012602 Solanum tuberosum HOM05D007622 ORTHO05D009409 9.5e-38 160.2 102 72.5
Dinv35108 Davidia involucrata HOM05D007622 ORTHO05D009409 1.2e-37 159.8 98 76.5
FvH4_6g51480 Fragaria vesca HOM05D007622 ORTHO05D009409 1.2e-37 159.8 98 77.6
FAN02G2753 Fragaria x ananassa HOM05D007622 ORTHO05D009409 1.2e-37 159.8 98 77.6
FAN09G4241 Fragaria x ananassa HOM05D007622 ORTHO05D009409 1.2e-37 159.8 98 77.6
FAN14G0072 Fragaria x ananassa HOM05D007622 ORTHO05D009409 1.2e-37 159.8 98 77.6
TWI36G0684 Tripterygium wilfordii HOM05D007622 ORTHO05D009409 1.2e-37 159.8 117 68.4
ClCG09G019280 Citrullus lanatus HOM05D007622 ORTHO05D009409 1.6e-37 159.5 114 69.3
HanXRQChr09g0255201 Helianthus annuus HOM05D007622 ORTHO05D009409 1.6e-37 159.5 101 75.2
Lsat_1_v5_gn_4_184040 Lactuca sativa HOM05D007622 ORTHO05D009409 1.6e-37 159.5 97 78.4
Potri.017G071300 Populus trichocarpa HOM05D007622 ORTHO05D009409 1.6e-37 159.5 107 69.2
CANSAT64G0926 Cannabis sativa HOM05D007622 ORTHO05D009409 2.1e-37 159.1 114 67.5
Eucgr.J02247 Eucalyptus grandis HOM05D007622 ORTHO05D009409 2.1e-37 159.1 108 73.1
FAN05G3531 Fragaria x ananassa HOM05D007622 ORTHO05D009409 2.1e-37 159.1 117 68.4
arahy.Tifrunner.gnm1.ann1.QKG8XN Arachis hypogaea HOM05D007622 ORTHO05D009409 2.8e-37 158.7 110 69.1
RcHm_v2.0_Chr2g0173121 Rosa chinensis HOM05D007622 ORTHO05D009409 2.8e-37 158.7 98 76.5
CSS0000151 Camellia sinensis var. sinensis HOM05D007622 ORTHO05D009409 3.6e-37 158.3 120 65.8
CSS0044104 Camellia sinensis var. sinensis HOM05D007622 ORTHO05D009409 3.6e-37 158.3 120 65.8
Gohir.D07G230100 Gossypium hirsutum HOM05D007622 ORTHO05D009409 4.7e-37 157.9 113 69.9
Gorai.001G265400 Gossypium raimondii HOM05D007622 ORTHO05D009409 4.7e-37 157.9 113 69.9
Sabra16G0223800 Salix brachista HOM05D007622 ORTHO05D009409 4.7e-37 157.9 107 71.0
Ah.03g137040 Amaranthus hybridus HOM05D007622 ORTHO05D009409 6.1e-37 157.5 96 78.1
COL.COLO4_29125 Corchorus olitorius HOM05D000285 ORTHO05D009409 6.1e-37 157.5 98 76.5
CsaV3_5G027110 Cucumis sativus L. HOM05D007622 ORTHO05D009409 8.0e-37 157.1 117 65.8
Duzib147G0488 Durio zibethinus HOM05D007622 ORTHO05D009409 8.0e-37 157.1 104 72.1
Gohir.A07G223400 Gossypium hirsutum HOM05D007622 ORTHO05D009409 8.0e-37 157.1 104 72.1
QL02p074426 Quercus lobata HOM05D007622 ORTHO05D009409 8.0e-37 157.1 108 69.4
CAN.G473.12 Capsicum annuum HOM05D007622 ORTHO05D009409 1.4e-36 156.4 102 72.5
MELO3C021583.2 Cucumis melo HOM05D007622 ORTHO05D009409 1.8e-36 156.0 117 65.8
DCAR_001440 Daucus carota HOM05D007622 ORTHO05D009409 1.8e-36 156.0 97 78.4
Nitab4.5_0003318g0060 Nicotiana tabacum HOM05D007622 ORTHO05D009409 1.8e-36 156.0 102 70.6
Oeu013968.1 Olea europaea HOM05D007622 ORTHO05D009409 1.8e-36 156.0 102 72.5
Sc03g0007350 Simmondsia chinensis HOM05D007622 ORTHO05D009409 2.3e-36 155.6 97 76.3
SGA_v2.0_scaffold195G40817 Striga asiatica HOM05D007622 ORTHO05D009409 3.0e-36 155.2 103 72.8
Medtr7g033680 Medicago truncatula HOM05D007622 ORTHO05D009409 4.0e-36 154.8 126 65.1
Nitab4.5_0001860g0100 Nicotiana tabacum HOM05D007622 ORTHO05D009409 4.0e-36 154.8 94 74.5
CiPaw.04G028800 Carya illinoinensis HOM05D007622 ORTHO05D009409 5.2e-36 154.5 99 71.7
Glyma.19G060600 Glycine max HOM05D007622 ORTHO05D009409 5.2e-36 154.5 99 74.7
SalBow1G5210 Salvia bowleyana HOM05D007622 ORTHO05D009409 6.8e-36 154.1 117 65.8
Peaxi162Scf00129g01661 Petunia axillaris HOM05D007622 ORTHO05D009409 8.9e-36 153.7 102 69.6
Atru.chr6.2402 Acer truncatum HOM05D007622 ORTHO05D009409 1.2e-35 153.3 118 68.6
Aqoxy5G03768 Aquilegia oxysepala HOM05D007622 ORTHO05D009409 1.2e-35 153.3 103 68.9
EL10Ac6g14084 Beta vulgaris HOM05D007622 ORTHO05D009409 1.2e-35 153.3 104 69.2
Actinidia16945 Actinidia chinensis HOM05D007622 ORTHO05D009409 1.5e-35 152.9 97 74.2
Glyma.16G070800 Glycine max HOM05D007622 ORTHO05D009409 2.0e-35 152.5 99 73.7
Lalb_Chr24g0402871 Lupinus albus HOM05D007622 ORTHO05D009409 4.4e-35 151.4 97 72.2
MSTRG.15530 Avicennia marina HOM05D007622 ORTHO05D009409 7.5e-35 150.6 102 71.6
Phvul.008G153900 Phaseolus vulgaris HOM05D007622 ORTHO05D009409 7.5e-35 150.6 116 63.8
Nn4g22626 Nelumbo nucifera HOM05D007622 ORTHO05D009409 9.8e-35 150.2 117 62.4
CDE02G3805 Ceratophyllum demersum HOM05D007622 ORTHO05D009409 1.7e-34 149.4 114 60.5
ECA232G2324 Erigeron canadensis HOM05D007622 ORTHO05D009409 1.7e-34 149.4 112 66.1
Manes.15G151000 Manihot esculenta HOM05D007622 ORTHO05D009409 4.9e-34 147.9 107 67.3
Thecc.04G017800 Theobroma cacao HOM05D007622 ORTHO05D009409 4.9e-34 147.9 104 70.2
CDE09G0341 Ceratophyllum demersum HOM05D007622 ORTHO05D009409 6.3e-34 147.5 114 60.5
Migut.H00074 Erythranthe guttata HOM05D007622 ORTHO05D009409 8.3e-34 147.1 114 62.3
PSO111G0004 Papaver somniferum HOM05D007622 ORTHO05D009409 2.4e-33 145.6 118 61.9
Duzib264G0071 Durio zibethinus HOM05D007622 ORTHO05D009409 3.1e-33 145.2 98 73.5
arahy.Tifrunner.gnm1.ann1.30MLP8 Arachis hypogaea HOM05D007622 ORTHO05D009409 7.0e-33 144.1 120 61.7
TAR629G2574 Trochodendron aralioides HOM05D007622 ORTHO05D009409 7.0e-33 144.1 98 70.4
PSO067G0063 Papaver somniferum HOM05D007622 ORTHO05D009409 1.2e-32 143.3 118 60.2
Hund12976 Selenicereus undatus HOM05D007622 ORTHO05D009409 1.6e-32 142.9 97 67.0
Zm00001eb425130 Zea mays HOM05D007622 ORTHO05D009409 1.6e-32 142.9 105 63.8
Lj1g0022477 Lotus japonicus HOM05D007622 ORTHO05D009409 2.7e-32 142.1 127 58.3
TPR.G1098 Trifolium pratense HOM05D007622 ORTHO05D009409 2.7e-32 142.1 89 75.3
Os04g0482900 Oryza sativa ssp. japonica HOM05D007622 ORTHO05D009409 1.1e-30 136.7 109 59.6
Pp3c12_19400 Physcomitrium patens HOM05D007622 ORTHO05D009409 1.3e-26 123.2 101 54.5
SEGI_15693 Sequoiadendron giganteum HOM05D007622 ORTHO05D009409 3.7e-26 121.7 87 64.4
AagrBONN_evm.TU.Sc2ySwM_117.2472 Anthoceros agrestis HOM05D007622 ORTHO05D009409 4.9e-26 121.3 97 55.7
Rhsim08G0048800 Rhododendron simsii HOM05D007622 ORTHO05D009409 3.5e-24 115.2 94 59.6
TAR371G1070 Trochodendron aralioides HOM05D007622 ORTHO05D009409 5.0e-23 111.3 91 60.4
vmacro18290 Vaccinium macrocarpon HOM05D007622 ORTHO05D009409 3.3e-22 108.6 104 54.8
SMO367G1081 Selaginella moellendorffii HOM05D007622 ORTHO05D009409 5.6e-22 107.8 94 46.8
CBR_g34193 Chara braunii HOM05D007622 ORTHO05D009409 4.7e-21 104.8 99 48.5
Psat3g166480 Pisum sativum HOM05D007622 ORTHO05D009409 8.9e-20 100.5 64 73.4
MD09G1025400 Malus domestica HOM05D007622 ORTHO05D009409 1.5e-19 99.8 60 78.3
Cre12.g498700 Chlamydomonas reinhardtii HOM05D007622 ORTHO05D009409 3.3e-14 82.0 77 45.5
MCO04G361 Micromonas commoda HOM05D007622 ORTHO05D009409 3.5e-08 62.0 77 39.0
vmacro18289 Vaccinium macrocarpon HOM05D007622 ORTHO05D009409 1.9e-06 56.2 51 60.8


User provided reference genes

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