Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g27517 Brassica carinata HOM05D002385 ORTHO05D002245 3.0e-57 224.9 112 100.0
BcaC01g03458 Brassica carinata HOM05D002385 ORTHO05D002245 5.9e-13 77.8 53 79.2
BolC1t05607H Brassica oleracea HOM05D002385 ORTHO05D002245 1.0e-12 77.0 49 73.5
BcaC04g19479 Brassica carinata HOM05D002385 ORTHO05D002245 1.3e-12 76.6 51 68.6
BraA10t43997Z Brassica rapa HOM05D002385 ORTHO05D002245 1.3e-12 76.6 50 72.0
BraA10t43998Z Brassica rapa HOM05D002385 ORTHO05D002245 1.3e-12 76.6 52 69.2
C03p52250 Brassica napus HOM05D002385 ORTHO05D002245 2.9e-12 75.5 60 66.7
BcaC04g19478 Brassica carinata HOM05D002385 ORTHO05D002245 3.8e-12 75.1 44 77.3
A10p19200 Brassica napus HOM05D002385 ORTHO05D002245 3.8e-12 75.1 53 66.0
C09p55310 Brassica napus HOM05D002385 ORTHO05D002245 3.8e-12 75.1 44 77.3
C09p55320 Brassica napus HOM05D002385 ORTHO05D002245 3.8e-12 75.1 44 77.3
BolC9t58392H Brassica oleracea HOM05D002385 ORTHO05D002245 3.8e-12 75.1 44 77.3
BolC9t58394H Brassica oleracea HOM05D002385 ORTHO05D002245 3.8e-12 75.1 44 77.3
BolC3t17506H Brassica oleracea HOM05D002385 ORTHO05D002245 8.5e-12 73.9 41 87.8
Sp3g20030 Schrenkiella parvula HOM05D002385 ORTHO05D002245 1.9e-11 72.8 40 82.5
Thhalv10021881m.g Eutrema salsugineum HOM05D002385 ORTHO05D002245 9.4e-11 70.5 41 80.5
C05p41120 Brassica napus HOM05D002385 ORTHO05D002245 1.2e-10 70.1 42 76.2
BcaB06g26327 Brassica carinata HOM05D002385 ORTHO05D002245 2.1e-10 69.3 40 77.5
A03p42660 Brassica napus HOM05D002385 ORTHO05D002245 3.6e-10 68.6 56 64.3
BolC5t32855H Brassica oleracea HOM05D002385 ORTHO05D002245 3.6e-10 68.6 38 78.9
BolC9t58393H Brassica oleracea HOM05D002385 ORTHO05D033827 3.6e-10 68.6 39 76.9
BcaB08g37322 Brassica carinata HOM05D002385 ORTHO05D002245 6.1e-10 67.8 40 75.0
BcaB04g20534 Brassica carinata HOM05D002385 ORTHO05D002245 8.0e-10 67.4 40 75.0
C01p42010 Brassica napus HOM05D002385 ORTHO05D002245 8.0e-10 67.4 40 82.5
A01p32930 Brassica napus HOM05D002385 ORTHO05D002245 1.4e-09 66.6 70 51.4
BraA01t03414Z Brassica rapa HOM05D002385 ORTHO05D002245 1.4e-09 66.6 70 51.4
BcaC09g49159 Brassica carinata HOM05D002385 ORTHO05D002245 1.8e-09 66.2 39 82.1
AT3G22240 Arabidopsis thaliana HOM05D002385 ORTHO05D002245 3.0e-09 65.5 42 78.6
AL3G36500 Arabidopsis lyrata HOM05D002385 ORTHO05D002245 6.8e-09 64.3 42 76.2
Carub.0003s2241 Capsella rubella HOM05D002385 ORTHO05D002245 5.7e-08 61.2 42 73.8
CARHR098140 Cardamine hirsuta HOM05D002385 ORTHO05D002245 1.3e-07 60.1 41 75.6
AL3G36480 Arabidopsis lyrata HOM05D002385 ORTHO05D002245 1.7e-07 59.7 43 69.8
CARHR098150 Cardamine hirsuta HOM05D002385 ORTHO05D002245 1.7e-07 59.7 42 71.4
AT3G22231 Arabidopsis thaliana HOM05D002385 ORTHO05D002245 2.8e-07 58.9 48 58.3
AT3G22235 Arabidopsis thaliana HOM05D002385 ORTHO05D002245 2.8e-07 58.9 48 58.3
Aa31LG8G8820 Aethionema arabicum HOM05D002385 ORTHO05D002245 1.1e-06 57.0 46 60.9
CARHR150690 Cardamine hirsuta HOM05D002385 ORTHO05D002245 7.0e-06 54.3 42 71.4


User provided reference genes

Program Settings