Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g27458 Brassica carinata HOM05D000496 ORTHO05D039111 2.1e-56 222.2 120 100.0
BolC4t26275H Brassica oleracea HOM05D000496 ORTHO05D039111 6.7e-55 217.2 120 97.5
BolC5t33757H Brassica oleracea HOM05D000496 ORTHO05D014937 9.7e-46 186.8 131 78.6
BcaC03g14200 Brassica carinata HOM05D000496 ORTHO05D000411 9.4e-17 90.5 128 47.7
BcaC08g44730 Brassica carinata HOM05D000496 ORTHO05D019920 9.4e-17 90.5 133 46.6
BcaC04g22294 Brassica carinata HOM05D000496 ORTHO05D000411 3.6e-16 88.6 120 48.3
BcaC03g15709 Brassica carinata HOM05D000496 ORTHO05D000411 1.8e-15 86.3 114 50.9
BcaC02g10380 Brassica carinata HOM05D000496 ORTHO05D000411 5.2e-15 84.7 131 48.1
BcaC03g15107 Brassica carinata HOM05D000496 ORTHO05D000411 1.5e-14 83.2 131 45.0
BcaC07g38782 Brassica carinata HOM05D000496 ORTHO05D000411 1.5e-14 83.2 131 45.8
BcaC03g15984 Brassica carinata HOM05D000496 ORTHO05D000411 2.0e-14 82.8 131 45.8
BcaC02g09460 Brassica carinata HOM05D000496 ORTHO05D014937 4.4e-14 81.6 131 45.8
BcaC02g09892 Brassica carinata HOM05D000496 ORTHO05D032642 7.5e-14 80.9 126 45.2
C04p35470 Brassica napus HOM05D000496 ORTHO05D032642 8.3e-13 77.4 107 46.7
BolC4t25099H Brassica oleracea HOM05D000496 ORTHO05D032642 1.8e-12 76.3 107 46.7
BolC8t49340H Brassica oleracea HOM05D000496 ORTHO05D014937 1.8e-12 76.3 113 46.0
BcaC08g44039 Brassica carinata HOM05D000496 ORTHO05D014937 2.4e-12 75.9 133 41.4
BcaC01g03089 Brassica carinata HOM05D000496 ORTHO05D000411 3.1e-12 75.5 131 43.5
BcaC04g21671 Brassica carinata HOM05D000496 ORTHO05D000411 3.1e-12 75.5 131 43.5
BcaC09g49414 Brassica carinata HOM05D000496 ORTHO05D094999 4.1e-12 75.1 118 44.1
BolC3t19004H Brassica oleracea HOM05D000496 ORTHO05D019920 5.4e-12 74.7 133 42.1
BcaC01g02163 Brassica carinata HOM05D000496 ORTHO05D000411 7.0e-12 74.3 113 45.1
BcaC05g28640 Brassica carinata HOM05D000496 ORTHO05D014937 9.1e-12 73.9 125 44.0
BcaC01g02264 Brassica carinata HOM05D000496 ORTHO05D019920 1.2e-11 73.6 133 41.4
BcaC07g37461 Brassica carinata HOM05D000496 ORTHO05D014937 1.6e-11 73.2 133 41.4
BcaC03g16242 Brassica carinata HOM05D030143 ORTHO05D002152 2.0e-11 72.8 133 41.4
BcaC01g01905 Brassica carinata HOM05D000496 ORTHO05D014937 4.5e-11 71.6 133 42.1
BcaC08g46179 Brassica carinata HOM05D000496 ORTHO05D000411 1.0e-10 70.5 125 42.4
BolC3t20864H Brassica oleracea HOM05D000496 ORTHO05D014937 1.0e-10 70.5 106 46.2
BcaC03g16444 Brassica carinata HOM05D000496 ORTHO05D000411 1.7e-10 69.7 131 43.5
BolC9t55004H Brassica oleracea HOM05D000496 ORTHO05D014937 2.3e-10 69.3 120 40.8
BcaC08g43480 Brassica carinata HOM05D000496 ORTHO05D000411 3.8e-10 68.6 118 42.4
BcaC06g36700 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-09 67.0 126 40.5
A05p20030 Brassica napus HOM05D000496 ORTHO05D014937 1.1e-09 67.0 109 44.0
BraA05t20909Z Brassica rapa HOM05D000496 ORTHO05D014937 1.1e-09 67.0 109 44.0
BcaB08g35328 Brassica carinata HOM05D000496 ORTHO05D000411 1.9e-09 66.2 114 42.1
BcaC09g50802 Brassica carinata HOM05D000496 ORTHO05D000411 2.5e-09 65.9 127 41.7
BolC9t59068H Brassica oleracea HOM05D000496 ORTHO05D014937 2.5e-09 65.9 126 40.5
BolC6t35943H Brassica oleracea HOM05D000496 ORTHO05D000411 3.3e-09 65.5 119 44.5
BcaC08g47088 Brassica carinata HOM05D000496 ORTHO05D000411 4.2e-09 65.1 129 40.3
BraA01t03743Z Brassica rapa HOM05D000496 ORTHO05D019920 4.2e-09 65.1 126 41.3
BcaC03g14607 Brassica carinata HOM05D000496 ORTHO05D031790 7.2e-09 64.3 126 42.9
BcaB07g33420 Brassica carinata HOM05D000496 ORTHO05D014937 1.2e-08 63.5 111 41.4
BcaC03g14600 Brassica carinata HOM05D022631 ORTHO05D024363 1.2e-08 63.5 108 43.5
BcaC04g19004 Brassica carinata HOM05D000496 ORTHO05D000411 1.2e-08 63.5 126 40.5
BcaC06g34334 Brassica carinata HOM05D000496 ORTHO05D039093 1.2e-08 63.5 112 42.0
BolC2t08741H Brassica oleracea HOM05D000496 ORTHO05D019920 1.2e-08 63.5 112 44.6
BolC7t43560H Brassica oleracea HOM05D000496 ORTHO05D039093 2.1e-08 62.8 112 42.0
BcaC05g28506 Brassica carinata HOM05D000496 ORTHO05D093697 6.1e-08 61.2 124 37.9
BolC5t33309H Brassica oleracea HOM05D000496 ORTHO05D039269 6.1e-08 61.2 124 37.9
BcaC02g10520 Brassica carinata HOM05D000496 ORTHO05D000411 8.0e-08 60.8 109 41.3
BcaC04g22204 Brassica carinata HOM05D000496 ORTHO05D000411 1.0e-07 60.5 125 37.6
BolC4t26549H Brassica oleracea HOM05D000496 ORTHO05D000411 2.3e-07 59.3 130 37.7
BolC7t41272H Brassica oleracea HOM05D000496 ORTHO05D000411 3.0e-07 58.9 133 37.6
BcaC01g01965 Brassica carinata HOM05D000496 ORTHO05D000411 4.0e-07 58.5 127 35.4
BcaC09g49650 Brassica carinata HOM05D000496 ORTHO05D095876 5.2e-07 58.2 126 41.3
BcaC05g25070 Brassica carinata HOM05D030143 ORTHO05D039637 8.9e-07 57.4 69 52.2
BcaC01g01239 Brassica carinata HOM05D000496 ORTHO05D000411 1.2e-06 57.0 126 38.1
BcaC09g47909 Brassica carinata HOM05D000496 ORTHO05D000411 1.2e-06 57.0 124 35.5
BcaC05g28859 Brassica carinata HOM05D000496 ORTHO05D000411 1.5e-06 56.6 93 41.9
BcaC08g43454 Brassica carinata HOM05D000496 ORTHO05D031880 2.0e-06 56.2 125 40.8
A03p66750 Brassica napus HOM05D022631 ORTHO05D024363 2.0e-06 56.2 101 40.6
BcaC01g02211 Brassica carinata HOM05D000496 ORTHO05D000411 3.4e-06 55.5 126 40.5
BcaC08g44837 Brassica carinata HOM05D000496 ORTHO05D000411 4.4e-06 55.1 126 38.9
BcaC06g36040 Brassica carinata HOM05D005496 ORTHO05D006677 5.7e-06 54.7 118 37.3
BcaC01g05229 Brassica carinata HOM05D000496 ORTHO05D039269 7.5e-06 54.3 124 34.7
BcaC08g45123 Brassica carinata HOM05D000496 ORTHO05D000411 9.8e-06 53.9 125 40.0


User provided reference genes

Program Settings