Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g27423 Brassica carinata HOM05D004342 ORTHO05D027051 9.0e-53 209.9 101 100.0
BolC5t32487H Brassica oleracea HOM05D004342 ORTHO05D016748 1.8e-37 159.1 103 79.6
BcaC01g01112 Brassica carinata HOM05D004342 ORTHO05D016748 5.3e-37 157.5 99 78.8
BolC3t21133H Brassica oleracea HOM05D004342 ORTHO05D016748 5.3e-37 157.5 99 78.8
BcaC03g16937 Brassica carinata HOM05D004342 ORTHO05D027051 1.2e-36 156.4 101 76.2
BcaC06g35994 Brassica carinata HOM05D004342 ORTHO05D027051 5.5e-34 147.5 101 73.3
C06p17080 Brassica napus HOM05D004342 ORTHO05D016748 7.2e-34 147.1 105 70.5
BcaB02g07288 Brassica carinata HOM05D004342 ORTHO05D016748 1.8e-32 142.5 88 78.4
BcaC08g44285 Brassica carinata HOM05D004342 ORTHO05D016748 1.8e-32 142.5 103 72.8
BcaB04g18376 Brassica carinata HOM05D004342 ORTHO05D018601 2.3e-32 142.1 103 73.8
BcaB01g01175 Brassica carinata HOM05D004342 ORTHO05D018601 2.5e-31 138.7 103 72.8
BcaB01g02523 Brassica carinata HOM05D004342 ORTHO05D016748 3.3e-31 138.3 88 78.4
BraA03t15693Z Brassica rapa HOM05D004342 ORTHO05D027051 2.4e-29 132.1 94 70.2
BolC8t47840H Brassica oleracea HOM05D004342 ORTHO05D016748 4.1e-29 131.3 100 67.0
BolC5t33355H Brassica oleracea HOM05D004342 ORTHO05D016748 9.0e-29 130.2 103 66.0
C05p46270 Brassica napus HOM05D004342 ORTHO05D016748 3.6e-25 118.2 100 61.0
BolC4t24121H Brassica oleracea HOM05D004342 ORTHO05D011040 2.5e-23 112.1 61 83.6
C05p32840 Brassica napus HOM05D004342 ORTHO05D041540 4.3e-23 111.3 89 66.3
BolC5t32015H Brassica oleracea HOM05D004342 ORTHO05D041540 7.4e-23 110.5 89 66.3
BolC2t09673H Brassica oleracea HOM05D004342 ORTHO05D042860 1.3e-22 109.8 61 82.0
C03p88250 Brassica napus HOM05D004342 ORTHO05D018601 2.2e-22 109.0 60 80.0
C02p39690 Brassica napus HOM05D004342 ORTHO05D014936 4.8e-22 107.8 89 64.0
C04p26830 Brassica napus HOM05D004342 ORTHO05D011040 4.8e-22 107.8 89 64.0
C09p56360 Brassica napus HOM05D004342 ORTHO05D011040 6.3e-22 107.5 87 63.2
BolC9t58505H Brassica oleracea HOM05D004342 ORTHO05D011040 8.2e-22 107.1 87 63.2
BcaC03g15908 Brassica carinata HOM05D004342 ORTHO05D011040 1.4e-21 106.3 89 62.9
BcaC05g27753 Brassica carinata HOM05D004342 ORTHO05D032754 1.4e-21 106.3 65 80.0
C05p37450 Brassica napus HOM05D004342 ORTHO05D032754 1.8e-21 105.9 63 81.0
BcaC04g19377 Brassica carinata HOM05D004342 ORTHO05D011040 3.1e-21 105.1 61 78.7
BolC4t26257H Brassica oleracea HOM05D004342 ORTHO05D011040 3.1e-21 105.1 61 78.7
C07p09210 Brassica napus HOM05D004342 ORTHO05D014936 6.9e-21 104.0 89 61.8
BolC6t36906H Brassica oleracea HOM05D004342 ORTHO05D011040 6.9e-21 104.0 61 78.7
BolC7t41332H Brassica oleracea HOM05D004342 ORTHO05D014936 6.9e-21 104.0 89 61.8
BraA02t07939Z Brassica rapa HOM05D004342 ORTHO05D107931 6.9e-21 104.0 60 83.3
BraA04t16111Z Brassica rapa HOM05D004342 ORTHO05D011040 6.9e-21 104.0 62 82.3
A04p03900 Brassica napus HOM05D004342 ORTHO05D018601 9.1e-21 103.6 60 83.3
BolC7t41910H Brassica oleracea HOM05D004342 ORTHO05D014936 9.1e-21 103.6 87 60.9
A03p66330 Brassica napus HOM05D000062 ORTHO05D000043 1.2e-20 103.2 61 75.4
BcaB05g23589 Brassica carinata HOM05D004342 ORTHO05D011040 2.0e-20 102.4 98 59.2
A06p19230 Brassica napus HOM05D004342 ORTHO05D018601 2.0e-20 102.4 61 75.4
A02p29080 Brassica napus HOM05D004342 ORTHO05D042860 2.6e-20 102.1 60 81.7
C07p14140 Brassica napus HOM05D004342 ORTHO05D014936 2.6e-20 102.1 87 60.9
BcaC03g16189 Brassica carinata HOM05D004342 ORTHO05D011040 3.4e-20 101.7 61 80.3
C04p46690 Brassica napus HOM05D004342 ORTHO05D011040 7.7e-20 100.5 63 76.2
BcaB07g32852 Brassica carinata HOM05D004342 ORTHO05D011040 1.0e-19 100.1 78 65.4
C03p70160 Brassica napus HOM05D004342 ORTHO05D011040 1.0e-19 100.1 89 61.8
C03p68080 Brassica napus HOM05D004342 ORTHO05D042288 2.9e-19 98.6 90 58.9
BolC3t19031H Brassica oleracea HOM05D004342 ORTHO05D042288 2.9e-19 98.6 90 58.9
BolC3t19271H Brassica oleracea HOM05D004342 ORTHO05D032754 2.9e-19 98.6 56 83.9
BcaC07g39329 Brassica carinata HOM05D004342 ORTHO05D018601 6.5e-19 97.4 61 72.1
BolC7t40696H Brassica oleracea HOM05D004342 ORTHO05D042740 1.4e-18 96.3 65 69.2
BcaC06g36550 Brassica carinata HOM05D004342 ORTHO05D018601 3.2e-18 95.1 61 68.9
A10p08140 Brassica napus HOM05D004342 ORTHO05D014936 4.2e-18 94.7 63 74.6
C07p03020 Brassica napus HOM05D004342 ORTHO05D042740 4.2e-18 94.7 65 67.7
BcaB05g23725 Brassica carinata HOM05D004342 ORTHO05D011040 1.6e-17 92.8 63 74.6
C02p48390 Brassica napus HOM05D004342 ORTHO05D011040 2.1e-17 92.4 63 73.0
BolC2t09619H Brassica oleracea HOM05D004342 ORTHO05D033291 2.1e-17 92.4 58 75.9
BolC2t10870H Brassica oleracea HOM05D004342 ORTHO05D011040 2.1e-17 92.4 63 73.0
BcaB08g35403 Brassica carinata HOM05D004342 ORTHO05D011040 2.7e-17 92.0 67 73.1
C08p23450 Brassica napus HOM05D004342 ORTHO05D042841 2.7e-17 92.0 54 75.9
BolC8t49973H Brassica oleracea HOM05D004342 ORTHO05D042841 2.7e-17 92.0 54 75.9
BraSC35t45984Z Brassica rapa HOM05D004342 ORTHO05D014936 2.7e-17 92.0 63 73.0
C02p36010 Brassica napus HOM05D004342 ORTHO05D033291 6.1e-17 90.9 58 74.1
C02p36040 Brassica napus HOM05D004342 ORTHO05D033291 6.1e-17 90.9 58 74.1
C02p40200 Brassica napus HOM05D004342 ORTHO05D014936 7.9e-17 90.5 53 81.1
BcaB01g02102 Brassica carinata HOM05D004342 ORTHO05D011040 1.8e-16 89.4 89 56.2
BcaB03g16647 Brassica carinata HOM05D004342 ORTHO05D011040 3.0e-16 88.6 64 75.0
BcaB08g35473 Brassica carinata HOM05D004342 ORTHO05D011040 5.1e-16 87.8 67 70.1
BcaB01g01402 Brassica carinata HOM05D004342 ORTHO05D011040 6.7e-16 87.4 67 70.1
BcaB06g27861 Brassica carinata HOM05D004342 ORTHO05D011040 6.7e-16 87.4 89 55.1
BcaB08g35285 Brassica carinata HOM05D004342 ORTHO05D011040 6.7e-16 87.4 89 55.1
BcaB08g35544 Brassica carinata HOM05D004342 ORTHO05D011040 8.8e-16 87.0 89 53.9
BcaB06g27914 Brassica carinata HOM05D004342 ORTHO05D011040 1.5e-15 86.3 89 55.1
BcaB02g06560 Brassica carinata HOM05D004342 ORTHO05D011040 2.0e-15 85.9 67 67.2
BcaB05g23199 Brassica carinata HOM05D004342 ORTHO05D011040 2.6e-15 85.5 65 67.7
BraA01t02418Z Brassica rapa HOM05D004342 ORTHO05D011040 3.3e-15 85.1 64 70.3
BcaB07g33403 Brassica carinata HOM05D004342 ORTHO05D093493 4.4e-15 84.7 67 73.1
A01p25070 Brassica napus HOM05D004342 ORTHO05D011040 4.4e-15 84.7 64 70.3
C04p30590 Brassica napus HOM05D004342 ORTHO05D097110 4.4e-15 84.7 101 50.5
BcaB05g23453 Brassica carinata HOM05D004342 ORTHO05D011040 7.4e-15 84.0 89 53.9
A09p34820 Brassica napus HOM05D004342 ORTHO05D041860 7.4e-15 84.0 87 54.0
BcaB06g27477 Brassica carinata HOM05D004342 ORTHO05D011040 9.7e-15 83.6 89 52.8
BraA09t39012Z Brassica rapa HOM05D004342 ORTHO05D041860 9.7e-15 83.6 87 52.9
BcaB06g27355 Brassica carinata HOM05D004342 ORTHO05D011040 1.3e-14 83.2 89 52.8
C06p19750 Brassica napus HOM05D003441 ORTHO05D004516 4.1e-13 78.2 61 62.3
BcaC08g47011 Brassica carinata HOM05D004342 ORTHO05D011040 1.2e-12 76.6 50 74.0
C07p02600 Brassica napus HOM05D004342 ORTHO05D040391 1.6e-12 76.3 54 68.5
BolC7t40658H Brassica oleracea HOM05D004342 ORTHO05D040391 3.5e-12 75.1 54 66.7
C03p64680 Brassica napus HOM05D004342 ORTHO05D040895 4.5e-12 74.7 57 61.4
BcaB04g18145 Brassica carinata HOM05D004342 ORTHO05D011040 5.9e-12 74.3 53 67.9
A01p28260 Brassica napus HOM05D004342 ORTHO05D014936 3.8e-11 71.6 45 77.8
C08p05970 Brassica napus HOM05D004342 ORTHO05D098872 6.5e-11 70.9 43 81.4
BraA07t27945Z Brassica rapa HOM05D004342 ORTHO05D014936 9.4e-10 67.0 71 50.7
BcaB07g33971 Brassica carinata HOM05D004342 ORTHO05D011040 1.6e-09 66.2 76 51.3
BcaB07g33226 Brassica carinata HOM05D004342 ORTHO05D014936 3.6e-09 65.1 58 56.9
BolC2t09984H Brassica oleracea HOM05D004342 ORTHO05D107287 1.7e-06 56.2 27 88.9
BolC8t47411H Brassica oleracea HOM05D004342 ORTHO05D106550 2.8e-06 55.5 27 88.9
BcaB03g16622 Brassica carinata HOM05D004342 ORTHO05D011040 4.8e-06 54.7 87 41.4
C01p35180 Brassica napus HOM05D004342 ORTHO05D028050 4.8e-06 54.7 27 81.5
BolC1t03477H Brassica oleracea HOM05D004342 ORTHO05D028050 4.8e-06 54.7 27 81.5
C07p06590 Brassica napus HOM05D004342 ORTHO05D042200 6.3e-06 54.3 27 81.5
BolC7t41081H Brassica oleracea HOM05D004342 ORTHO05D042200 6.3e-06 54.3 27 81.5


User provided reference genes

Program Settings