Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g27399 Brassica carinata HOM05D000416 ORTHO05D000322 1.1e-75 286.6 141 100.0
BcaB07g32476 Brassica carinata HOM05D000416 ORTHO05D000322 4.9e-49 198.0 132 75.8
C05p18850 Brassica napus HOM05D000416 ORTHO05D027099 1.1e-45 186.8 130 76.2
BcaC01g02569 Brassica carinata HOM05D000416 ORTHO05D027099 1.1e-43 180.3 126 77.0
C03p63370 Brassica napus HOM05D000416 ORTHO05D027099 1.1e-43 180.3 126 77.0
BolC3t18590H Brassica oleracea HOM05D000416 ORTHO05D027099 1.1e-43 180.3 126 77.0
BcaC05g25933 Brassica carinata HOM05D000416 ORTHO05D000322 1.4e-43 179.9 126 75.4
Sp6g25270 Schrenkiella parvula HOM05D000416 ORTHO05D000322 6.9e-43 177.6 132 69.7
BcaB05g23364 Brassica carinata HOM05D000416 ORTHO05D000322 2.9e-41 172.2 127 70.1
BraA02t05480Z Brassica rapa HOM05D000416 ORTHO05D000322 2.5e-40 169.1 131 67.9
A02p05210 Brassica napus HOM05D000416 ORTHO05D000322 9.3e-40 167.2 131 67.2
C05p27610 Brassica napus HOM05D000416 ORTHO05D000322 1.8e-38 162.9 138 63.0
BolC5t31482H Brassica oleracea HOM05D000416 ORTHO05D000322 1.8e-38 162.9 138 63.0
BcaC05g26905 Brassica carinata HOM05D000416 ORTHO05D000322 3.0e-38 162.2 133 64.7
Thhalv10013672m.g Eutrema salsugineum HOM05D000416 ORTHO05D000322 5.5e-32 141.4 139 58.3
CARHR193880 Cardamine hirsuta HOM05D000416 ORTHO05D000322 2.2e-28 129.4 135 55.6
BcaB01g02943 Brassica carinata HOM05D000416 ORTHO05D000322 1.0e-25 120.6 133 51.1
AL6G30520 Arabidopsis lyrata HOM05D000416 ORTHO05D000322 2.2e-25 119.4 115 54.8
Aa31LG11G10540 Aethionema arabicum HOM05D000416 ORTHO05D000322 2.9e-25 119.0 137 48.2
BolC3t15591H Brassica oleracea HOM05D000416 ORTHO05D000322 8.5e-25 117.5 125 52.0
BraA03t11921Z Brassica rapa HOM05D000416 ORTHO05D000322 1.4e-24 116.7 125 51.2
BcaC01g04900 Brassica carinata HOM05D000416 ORTHO05D000322 1.9e-24 116.3 125 52.0
C03p32520 Brassica napus HOM05D000416 ORTHO05D000322 1.9e-24 116.3 125 52.0
A03p27080 Brassica napus HOM05D000416 ORTHO05D000322 7.2e-24 114.4 125 50.4
AT5G19100 Arabidopsis thaliana HOM05D000416 ORTHO05D000322 4.6e-23 111.7 109 56.0
Carub.0006s1743 Capsella rubella HOM05D000416 ORTHO05D000322 3.0e-22 109.0 110 53.6
CARHR193870 Cardamine hirsuta HOM05D000416 ORTHO05D000322 1.5e-21 106.7 144 46.5
BcaB05g23365 Brassica carinata HOM05D000416 ORTHO05D000322 5.7e-21 104.8 115 52.2
Aa31LG11G10580 Aethionema arabicum HOM05D000416 ORTHO05D000322 1.3e-17 93.6 141 41.8
Aa31LG11G10600 Aethionema arabicum HOM05D000416 ORTHO05D000322 1.7e-17 93.2 137 43.1
BcaC01g04901 Brassica carinata HOM05D000416 ORTHO05D008509 1.4e-14 83.6 82 54.9
CARHR193850 Cardamine hirsuta HOM05D000416 ORTHO05D000322 1.4e-14 83.6 99 44.4
Sp6g25260 Schrenkiella parvula HOM05D000416 ORTHO05D000322 4.4e-13 78.6 118 40.7
Thhalv10015503m.g Eutrema salsugineum HOM05D000416 ORTHO05D000322 5.7e-13 78.2 125 38.4
BcaC03g13640 Brassica carinata HOM05D000416 ORTHO05D000322 1.7e-12 76.6 120 40.0
C02p10300 Brassica napus HOM05D000416 ORTHO05D000322 1.7e-12 76.6 120 40.0
A02p05220 Brassica napus HOM05D000416 ORTHO05D000322 2.2e-12 76.3 107 43.0
BcaB05g23367 Brassica carinata HOM05D000305 ORTHO05D000065 2.0e-10 69.7 129 36.4
Aa31LG5G16590 Aethionema arabicum HOM05D000416 ORTHO05D000322 8.8e-06 54.3 113 28.3


User provided reference genes

Program Settings