Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g27281 Brassica carinata HOM05D007413 ORTHO05D009357 1.3e-58 229.6 122 100.0
BcaC02g09685 Brassica carinata HOM05D007413 ORTHO05D009357 1.2e-54 216.5 122 94.3
C04p45600 Brassica napus HOM05D007413 ORTHO05D009357 1.2e-54 216.5 122 94.3
BolC4t26142H Brassica oleracea HOM05D007413 ORTHO05D009357 1.2e-54 216.5 122 94.3
A04p11950 Brassica napus HOM05D007413 ORTHO05D009357 1.3e-53 213.0 122 92.6
BraA04t16860Z Brassica rapa HOM05D007413 ORTHO05D009357 1.3e-53 213.0 122 92.6
Thhalv10027993m.g Eutrema salsugineum HOM05D007413 ORTHO05D009357 5.8e-38 161.0 125 75.2
Sp7g02750 Schrenkiella parvula HOM05D007413 ORTHO05D009357 6.4e-37 157.5 126 74.6
CARHR263170 Cardamine hirsuta HOM05D007413 ORTHO05D009357 7.1e-28 127.5 120 65.8
AL7G51220 Arabidopsis lyrata HOM05D007413 ORTHO05D009357 6.6e-26 120.9 119 68.1
AT5G39240 Arabidopsis thaliana HOM05D007413 ORTHO05D009357 7.3e-25 117.5 120 64.2
Carub.0007s3668 Capsella rubella HOM05D007413 ORTHO05D009357 4.4e-22 108.2 130 62.3
Aa31LG2G3920 Aethionema arabicum HOM05D007413 ORTHO05D009357 1.6e-19 99.8 126 59.5
Aa31LG9G16690 Aethionema arabicum HOM05D007413 ORTHO05D009357 2.1e-19 99.4 122 56.6
AL5G19460 Arabidopsis lyrata HOM05D007413 ORTHO05D009357 6.6e-18 94.4 126 52.4
AT3G29370 Arabidopsis thaliana HOM05D007413 ORTHO05D009357 1.1e-15 87.0 126 50.0
Carub.0005s0809 Capsella rubella HOM05D007413 ORTHO05D009357 1.7e-13 79.7 126 49.2
THA.LOC109116393 Tarenaya hassleriana HOM05D007413 ORTHO05D009357 1.4e-12 76.6 109 47.7
THA.LOC104825781 Tarenaya hassleriana HOM05D007413 ORTHO05D009357 6.0e-11 71.2 110 46.4
CANSAT64G0406 Cannabis sativa HOM05D007413 ORTHO05D009357 1.5e-09 66.6 103 41.7
Eucgr.I02025 Eucalyptus grandis HOM05D007413 ORTHO05D009357 1.5e-09 66.6 81 46.9
PGR004G0469 Punica granatum HOM05D007413 ORTHO05D009357 1.9e-09 66.2 75 50.7
Ciclev10013609m.g Citrus clementina HOM05D007413 ORTHO05D009357 4.3e-09 65.1 97 40.2
Phvul.004G035200 Phaseolus vulgaris HOM05D007413 ORTHO05D009357 5.6e-09 64.7 120 42.5
Sabra04G0069100 Salix brachista HOM05D007413 ORTHO05D009357 7.4e-09 64.3 82 48.8
COL.COLO4_00052 Corchorus olitorius HOM05D007413 ORTHO05D009357 1.3e-08 63.5 75 53.3
Prupe.3G256400 Prunus persica HOM05D007413 ORTHO05D009357 2.1e-08 62.8 71 49.3
VMungo0464G1276 Vigna mungo HOM05D007413 ORTHO05D009357 2.1e-08 62.8 125 38.4
Oeu062157.1 Olea europaea HOM05D007413 ORTHO05D009357 3.7e-08 62.0 79 46.8
Cc07_g04120 Coffea canephora HOM05D007413 ORTHO05D009357 4.8e-08 61.6 111 42.3
Lalb_Chr06g0174991 Lupinus albus HOM05D007413 ORTHO05D009357 4.8e-08 61.6 67 53.7
MD09G1064600 Malus domestica HOM05D007413 ORTHO05D009357 4.8e-08 61.6 104 41.3
Lj2g0007962 Lotus japonicus HOM05D007413 ORTHO05D009357 8.1e-08 60.8 81 50.6
Manes.01G097200 Manihot esculenta HOM05D007413 ORTHO05D009357 1.1e-07 60.5 119 39.5
Hma1.2p1_0481F.1_g162070 Hydrangea macrophylla HOM05D007413 ORTHO05D009357 1.4e-07 60.1 94 41.5
Lsat_1_v5_gn_2_87601 Lactuca sativa HOM05D007413 ORTHO05D009357 1.4e-07 60.1 112 39.3
Sabra17G0082000 Salix brachista HOM05D007413 ORTHO05D009357 1.4e-07 60.1 120 39.2
Potri.004G119600 Populus trichocarpa HOM05D007413 ORTHO05D009357 2.4e-07 59.3 112 40.2
Sopen02g033450 Solanum pennellii HOM05D007413 ORTHO05D009357 2.4e-07 59.3 95 41.1
Lsat_1_v5_gn_4_171221 Lactuca sativa HOM05D007413 ORTHO05D009357 3.1e-07 58.9 85 42.4
QL02p067998 Quercus lobata HOM05D007413 ORTHO05D009357 3.1e-07 58.9 107 42.1
Migut.K01283 Erythranthe guttata HOM05D007413 ORTHO05D009357 4.0e-07 58.5 108 40.7
FAN05G2048 Fragaria x ananassa HOM05D007413 ORTHO05D009357 4.0e-07 58.5 79 45.6
Potri.017G093000 Populus trichocarpa HOM05D007413 ORTHO05D009357 4.0e-07 58.5 72 51.4
Lalb_Chr21g0318381 Lupinus albus HOM05D007413 ORTHO05D009357 5.3e-07 58.2 74 45.9
Nitab4.5_0000565g0230 Nicotiana tabacum HOM05D007413 ORTHO05D009357 5.3e-07 58.2 108 44.4
TWI34G0597 Tripterygium wilfordii HOM05D007413 ORTHO05D009357 5.3e-07 58.2 101 40.6
Thecc.04G093400 Theobroma cacao HOM05D007413 ORTHO05D009357 6.9e-07 57.8 121 40.5
MD17G1057900 Malus domestica HOM05D007413 ORTHO05D009357 9.0e-07 57.4 113 39.8
Nitab4.5_0010051g0020 Nicotiana tabacum HOM05D007413 ORTHO05D009357 9.0e-07 57.4 68 50.0
Solyc02g088740.1 Solanum lycopersicum HOM05D007413 ORTHO05D009357 9.0e-07 57.4 95 41.1
FAN09G1793 Fragaria x ananassa HOM05D007413 ORTHO05D009357 1.5e-06 56.6 117 38.5
CAN.G206.219 Capsicum annuum HOM05D007413 ORTHO05D009357 2.0e-06 56.2 71 46.5
Cfa007655 Carpinus fangiana HOM05D007413 ORTHO05D009357 2.0e-06 56.2 112 39.3
FAN02G2783 Fragaria x ananassa HOM05D007413 ORTHO05D009357 2.0e-06 56.2 117 37.6
Manes.02G054200 Manihot esculenta HOM05D007413 ORTHO05D009357 2.0e-06 56.2 73 45.2
SalBow1G6503 Salvia bowleyana HOM05D007413 ORTHO05D009357 2.0e-06 56.2 79 45.6
TPR.G10008 Trifolium pratense HOM05D007413 ORTHO05D009357 2.0e-06 56.2 110 38.2
CSS0009905 Camellia sinensis var. sinensis HOM05D007413 ORTHO05D009357 2.6e-06 55.8 107 37.4
CSS0018085 Camellia sinensis var. sinensis HOM05D007413 ORTHO05D009357 2.6e-06 55.8 107 37.4
FvH4_6g47010 Fragaria vesca HOM05D007413 ORTHO05D009357 2.6e-06 55.8 108 37.0
FAN14G4532 Fragaria x ananassa HOM05D007413 ORTHO05D009357 2.6e-06 55.8 108 37.0
CAN.G398.10 Capsicum annuum HOM05D007413 ORTHO05D009357 3.4e-06 55.5 78 42.3
Cpa.g.sc3362.1 Carica papaya HOM05D007413 ORTHO05D009357 3.4e-06 55.5 94 40.4
Gorai.012G049200 Gossypium raimondii HOM05D007413 ORTHO05D009357 5.8e-06 54.7 114 36.8
Psat1g067640 Pisum sativum HOM05D007413 ORTHO05D009357 5.8e-06 54.7 99 35.4
Glyma.13G057000 Glycine max HOM05D007413 ORTHO05D009357 7.6e-06 54.3 113 39.8
Gohir.D04G043900 Gossypium hirsutum HOM05D007413 ORTHO05D009357 7.6e-06 54.3 114 36.8
Duzib147G0133 Durio zibethinus HOM05D007413 ORTHO05D009357 1.0e-05 53.9 120 39.2


User provided reference genes

Program Settings