Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g27198 Brassica carinata HOM05D006225 ORTHO05D007676 1.8e-204 715.7 362 100.0
BcaC02g09645 Brassica carinata HOM05D006225 ORTHO05D007676 3.9e-199 698.0 362 97.5
BraA04t16801Z Brassica rapa HOM05D006225 ORTHO05D007676 8.7e-199 696.8 362 96.7
C04p45020 Brassica napus HOM05D006225 ORTHO05D007676 1.3e-197 693.0 362 96.7
BolC4t26080H Brassica oleracea HOM05D006225 ORTHO05D007676 1.3e-197 693.0 362 96.7
A04p11390 Brassica napus HOM05D006225 ORTHO05D007676 2.8e-197 691.8 362 96.7
BcaB02g08011 Brassica carinata HOM05D006225 ORTHO05D007676 3.0e-191 671.8 362 92.8
Sp7g03650 Schrenkiella parvula HOM05D006225 ORTHO05D007676 3.1e-188 661.8 362 92.8
Thhalv10027811m.g Eutrema salsugineum HOM05D006225 ORTHO05D007676 1.4e-185 652.9 362 90.6
AT5G38380 Arabidopsis thaliana HOM05D006225 ORTHO05D007676 2.7e-184 648.7 363 89.8
AL7G52230 Arabidopsis lyrata HOM05D006225 ORTHO05D007676 3.5e-184 648.3 363 90.4
CARHR214220 Cardamine hirsuta HOM05D006225 ORTHO05D007676 8.7e-183 643.7 362 88.4
Aa31LG9G17110 Aethionema arabicum HOM05D006225 ORTHO05D007676 1.1e-177 626.7 360 88.1
Carub.0007s3769 Capsella rubella HOM05D006225 ORTHO05D007676 3.3e-166 588.6 362 82.6
THA.LOC104823860 Tarenaya hassleriana HOM05D006225 ORTHO05D007676 4.8e-165 584.7 360 81.7
CiPaw.03G061500 Carya illinoinensis HOM05D006225 ORTHO05D007676 4.4e-150 535.0 356 72.8
Prupe.2G152900 Prunus persica HOM05D006225 ORTHO05D007676 8.2e-149 530.8 357 72.5
Atru.chr1.1695 Acer truncatum HOM05D006225 ORTHO05D007676 4.1e-148 528.5 357 74.2
Thecc.04G133700 Theobroma cacao HOM05D006225 ORTHO05D007676 7.0e-148 527.7 356 73.3
Manes.02G068700 Manihot esculenta HOM05D006225 ORTHO05D007676 4.5e-147 525.0 360 72.2
Potri.017G115200 Populus trichocarpa HOM05D006225 ORTHO05D007676 5.9e-147 524.6 361 72.3
FvH4_7g12860 Fragaria vesca HOM05D006225 ORTHO05D007676 2.9e-146 522.3 358 69.8
FAN06G1752 Fragaria x ananassa HOM05D006225 ORTHO05D007676 2.9e-146 522.3 358 69.8
FAN03G3320 Fragaria x ananassa HOM05D006225 ORTHO05D007676 8.5e-146 520.8 358 69.6
COL.COLO4_09333 Corchorus olitorius HOM05D006225 ORTHO05D007676 7.2e-145 517.7 356 72.2
CANSAT78G2127 Cannabis sativa HOM05D006225 ORTHO05D007676 2.7e-144 515.8 361 70.1
CSS0013578 Camellia sinensis var. sinensis HOM05D006225 ORTHO05D007676 1.8e-143 513.1 351 72.1
CSS0045838 Camellia sinensis var. sinensis HOM05D006225 ORTHO05D007676 1.8e-143 513.1 351 72.1
Gohir.D12G052400 Gossypium hirsutum HOM05D006225 ORTHO05D007676 1.8e-143 513.1 360 71.1
Ciclev10012061m.g Citrus clementina HOM05D006225 ORTHO05D007676 3.0e-143 512.3 356 71.1
Gohir.A12G053700 Gossypium hirsutum HOM05D006225 ORTHO05D007676 8.8e-143 510.8 360 70.8
Gorai.008G055500 Gossypium raimondii HOM05D006225 ORTHO05D007676 8.8e-143 510.8 360 70.8
CsaV3_3G020710 Cucumis sativus L. HOM05D006225 ORTHO05D007676 1.2e-142 510.4 361 70.1
TAR374G0830 Trochodendron aralioides HOM05D006225 ORTHO05D007676 1.2e-142 510.4 361 69.3
TWI77G0942 Tripterygium wilfordii HOM05D006225 ORTHO05D007676 3.4e-142 508.8 356 70.8
Sed0021803 Sechium edule HOM05D006225 ORTHO05D007676 4.4e-142 508.4 377 67.9
Sabra17G0095400 Salix brachista HOM05D006225 ORTHO05D007676 7.5e-142 507.7 361 70.4
Glyma.13G045900 Glycine max HOM05D006225 ORTHO05D007676 1.1e-140 503.8 362 68.2
MD02G1195600 Malus domestica HOM05D006225 ORTHO05D007676 9.1e-140 500.7 358 68.7
ECA238G0211 Erigeron canadensis HOM05D006225 ORTHO05D007676 1.2e-139 500.4 362 69.9
Ca_13730_v3 Cicer arietinum L. HOM05D006225 ORTHO05D007676 1.6e-139 500.0 358 69.0
Glyma.19G049100 Glycine max HOM05D006225 ORTHO05D007676 1.6e-139 500.0 362 67.7
GSVIVG01031021001 Vitis vinifera HOM05D006225 ORTHO05D007676 4.5e-139 498.4 354 70.3
Sopen02g030750 Solanum pennellii HOM05D006225 ORTHO05D007676 1.0e-138 497.3 376 66.8
Lj4A191G46 Lonicera japonica HOM05D006225 ORTHO05D007676 2.2e-138 496.1 340 72.4
PGR042G1089 Punica granatum HOM05D006225 ORTHO05D007676 5.0e-138 495.0 358 67.6
TPR.G32473 Trifolium pratense HOM05D006225 ORTHO05D007676 1.1e-137 493.8 360 69.2
Lj2g0022404 Lotus japonicus HOM05D006225 ORTHO05D007676 1.9e-137 493.0 350 68.9
Medtr6g018620 Medicago truncatula HOM05D006225 ORTHO05D007676 3.2e-137 492.3 358 67.6
SGA_v2.0_scaffold33G13506 Striga asiatica HOM05D006225 ORTHO05D007676 7.2e-137 491.1 359 70.2
Psat1g081360 Pisum sativum HOM05D006225 ORTHO05D007676 9.5e-137 490.7 357 67.2
Eucgr.G01883 Eucalyptus grandis HOM05D006225 ORTHO05D007676 8.0e-136 487.6 358 66.8
HanXRQChr14g0438471 Helianthus annuus HOM05D006225 ORTHO05D007676 6.8e-135 484.6 361 67.9
PSO063G1031 Papaver somniferum HOM05D006225 ORTHO05D007676 8.8e-135 484.2 340 70.0
Lalb_Chr06g0174551 Lupinus albus HOM05D006225 ORTHO05D007676 1.5e-134 483.4 392 61.2
Phvul.004G065800 Phaseolus vulgaris HOM05D006225 ORTHO05D007676 3.4e-134 482.3 355 67.6
QL02p051369 Quercus lobata HOM05D006225 ORTHO05D007676 5.7e-134 481.5 401 63.8
Nn4g23886 Nelumbo nucifera HOM05D006225 ORTHO05D007676 8.3e-133 477.6 327 68.8
Aqoxy3G03957 Aquilegia oxysepala HOM05D006225 ORTHO05D007676 1.8e-132 476.5 360 66.1
VMungo0464G1087 Vigna mungo HOM05D006225 ORTHO05D007676 1.8e-132 476.5 360 66.7
PSO782G1071 Papaver somniferum HOM05D006225 ORTHO05D007676 9.2e-132 474.2 335 69.6
PGSC0003DMG400026393 Solanum tuberosum HOM05D006225 ORTHO05D007676 3.5e-131 472.2 330 70.3
Lsat_1_v5_gn_2_79301 Lactuca sativa HOM05D006225 ORTHO05D007676 3.6e-128 462.2 361 65.7
Migut.H00218 Erythranthe guttata HOM05D006225 ORTHO05D007676 1.0e-127 460.7 350 66.3
Cpa.g.sc282.8 Carica papaya HOM05D006225 ORTHO05D007676 3.0e-127 459.1 355 66.5
AUR62023301 Chenopodium quinoa HOM05D006225 ORTHO05D007676 6.8e-127 458.0 338 66.0
Zm00001eb360540 Zea mays HOM05D006225 ORTHO05D007676 1.8e-119 433.3 355 59.4
SalBow3G1182 Salvia bowleyana HOM05D006225 ORTHO05D007676 1.2e-118 430.6 350 63.4
Os07g0283200 Oryza sativa ssp. japonica HOM05D006225 ORTHO05D007676 6.4e-117 424.9 349 59.9
vmacro05555 Vaccinium macrocarpon HOM05D006225 ORTHO05D007676 3.2e-116 422.5 378 60.6
HPP92_020146 Vanilla planifolia HOM05D006225 ORTHO05D007676 4.1e-116 422.2 338 60.1
Oeu030786.4 Olea europaea HOM05D006225 ORTHO05D007676 1.6e-115 420.2 297 70.4
SEGI_09013 Sequoiadendron giganteum HOM05D006225 ORTHO05D007676 1.1e-113 414.1 326 58.9
Nitab4.5_0000659g0030 Nicotiana tabacum HOM05D006225 ORTHO05D007676 2.1e-112 409.8 326 64.7
Nitab4.5_0000912g0210 Nicotiana tabacum HOM05D006225 ORTHO05D007676 4.7e-112 408.7 326 64.7
ATR1125G113 Amborella trichopoda HOM05D006225 ORTHO05D007676 8.1e-112 407.9 347 59.4
unitig_0.g7 Utricularia gibba HOM05D006225 ORTHO05D007676 5.2e-111 405.2 353 58.4
MELO3C023807.2 Cucumis melo HOM05D006225 ORTHO05D007676 6.0e-107 391.7 427 51.1
EL10Ac2g04565 Beta vulgaris HOM05D006225 ORTHO05D007676 9.5e-105 384.4 305 61.6
Rhsim10G0067300 Rhododendron simsii HOM05D006225 ORTHO05D007676 4.7e-104 382.1 362 58.0
Cfa007923 Carpinus fangiana HOM05D006225 ORTHO05D010559 3.4e-102 375.9 242 74.8
FAN10G1546 Fragaria x ananassa HOM05D006225 ORTHO05D007676 7.8e-99 364.8 380 52.6
arahy.Tifrunner.gnm1.ann1.80Z7L9 Arachis hypogaea HOM05D006225 ORTHO05D007676 3.3e-97 359.4 272 65.1
AUR62009001 Chenopodium quinoa HOM05D006225 ORTHO05D007676 2.6e-94 349.7 354 52.0
ClCG05G011660 Citrullus lanatus HOM05D006225 ORTHO05D007676 4.2e-92 342.4 387 52.7
arahy.Tifrunner.gnm1.ann1.IRK6TR Arachis hypogaea HOM05D006225 ORTHO05D007676 9.0e-87 324.7 358 51.4
Haze_14153 Corylus avellana HOM05D006225 ORTHO05D007676 1.3e-85 320.9 349 52.7
Sc11g0008330 Simmondsia chinensis HOM05D006225 ORTHO05D007676 6.4e-85 318.5 260 61.9
Mapoly0135s0006 Marchantia polymorpha HOM05D006225 ORTHO05D007676 3.2e-84 316.2 316 51.9
Pp3c6_6620 Physcomitrium patens HOM05D006225 ORTHO05D007676 3.1e-79 299.7 311 47.6
Zm00001eb156340 Zea mays HOM05D006225 ORTHO05D007676 7.9e-75 285.0 241 59.8
RcHm_v2.0_Chr1g0351931 Rosa chinensis HOM05D006225 ORTHO05D007676 4.3e-73 279.3 168 74.4
Actinidia15885 Actinidia chinensis HOM05D006225 ORTHO05D007676 1.4e-71 274.2 190 73.2
Cc07_g08800 Coffea canephora HOM05D006225 ORTHO05D007676 1.7e-69 267.3 174 73.6
FAN06G4019 Fragaria x ananassa HOM05D006225 ORTHO05D007676 3.7e-64 249.6 168 71.4
Peaxi162Scf00394g00621 Petunia axillaris HOM05D006225 ORTHO05D007676 3.7e-64 249.6 184 68.5
Eucgr.H04974 Eucalyptus grandis HOM05D006225 ORTHO05D007676 6.3e-64 248.8 240 52.5
RcHm_v2.0_Chr1g0351941 Rosa chinensis HOM05D006225 ORTHO05D007676 1.4e-63 247.7 168 71.4
FAN10G1204 Fragaria x ananassa HOM05D006225 ORTHO05D007676 1.2e-62 244.6 173 65.9
Cc07_g08810 Coffea canephora HOM05D006225 ORTHO05D007676 1.5e-62 244.2 170 72.9
SMO196G0121 Selaginella moellendorffii HOM05D006225 ORTHO05D007676 1.2e-59 234.6 314 42.4
Hund13715 Selenicereus undatus HOM05D006225 ORTHO05D007676 8.8e-58 228.4 166 62.7
Solyc02g086060.4 Solanum lycopersicum HOM05D006225 ORTHO05D007676 3.1e-55 219.9 182 64.3
Solyc02g086070.2 Solanum lycopersicum HOM05D006225 ORTHO05D007676 2.6e-54 216.9 134 76.1
CDE02G4721 Ceratophyllum demersum HOM05D006225 ORTHO05D007676 7.2e-52 208.8 148 69.6
Hma1.2p1_0136F.1_g062270 Hydrangea macrophylla HOM05D006225 ORTHO05D007676 4.8e-48 196.1 123 72.4
Peaxi162Scf00394g00622 Petunia axillaris HOM05D006225 ORTHO05D007676 2.4e-47 193.7 108 81.5
arahy.Tifrunner.gnm1.ann1.PRIQ1K Arachis hypogaea HOM05D006225 ORTHO05D007676 5.7e-41 172.6 131 65.6
MD07G1125200 Malus domestica HOM05D006225 ORTHO05D007676 1.7e-40 171.0 111 70.3
arahy.Tifrunner.gnm1.ann1.8IQW6A Arachis hypogaea HOM05D006225 ORTHO05D007676 1.2e-38 164.9 117 65.8
Mapoly0085s0089 Marchantia polymorpha HOM05D006555 ORTHO05D008376 2.5e-36 157.1 333 33.3
arahy.Tifrunner.gnm1.ann1.RE0KC5 Arachis hypogaea HOM05D006225 ORTHO05D007676 5.5e-36 156.0 139 58.3
Oeu008428.1 Olea europaea HOM05D006225 ORTHO05D007676 3.0e-34 150.2 130 62.3
arahy.Tifrunner.gnm1.ann1.QBFC9G Arachis hypogaea HOM05D006225 ORTHO05D007676 6.7e-34 149.1 126 57.9
SHI22412 Sapria himalayana HOM05D006225 ORTHO05D007676 2.6e-33 147.1 94 69.1
CDE02G0503 Ceratophyllum demersum HOM05D006225 ORTHO05D007676 3.3e-33 146.7 106 63.2
HanXRQChr13g0396101 Helianthus annuus HOM05D006225 ORTHO05D007676 4.8e-32 142.9 94 71.3
arahy.Tifrunner.gnm1.ann1.QHM34M Arachis hypogaea HOM05D006225 ORTHO05D007676 4.1e-31 139.8 133 55.6
arahy.Tifrunner.gnm1.ann1.A87HRQ Arachis hypogaea HOM05D006225 ORTHO05D007676 6.1e-27 125.9 102 60.8
arahy.Tifrunner.gnm1.ann1.FD2CEU Arachis hypogaea HOM05D006225 ORTHO05D007676 4.0e-26 123.2 104 59.6
arahy.Tifrunner.gnm1.ann1.5T0UVN Arachis hypogaea HOM05D006225 ORTHO05D007676 7.5e-25 119.0 75 70.7
CBR_g8910 Chara braunii HOM05D006555 ORTHO05D008376 2.0e-22 110.9 209 36.4
CBR_g65298 Chara braunii HOM05D006225 ORTHO05D007676 3.5e-22 110.2 121 43.0
Hma1.2p1_0239F.1_g099920 Hydrangea macrophylla HOM05D006225 ORTHO05D007676 6.5e-21 105.9 63 76.2
MD07G1125400 Malus domestica HOM05D006225 ORTHO05D007676 2.5e-20 104.0 123 44.7
Actinidia36322 Actinidia chinensis HOM05D006225 ORTHO05D007676 4.2e-20 103.2 83 62.7
CARHR102570 Cardamine hirsuta HOM05D006555 ORTHO05D008376 1.8e-18 97.8 257 28.8
arahy.Tifrunner.gnm1.ann1.GQQ1MZ Arachis hypogaea HOM05D006225 ORTHO05D007676 6.8e-18 95.9 75 62.7
Eucgr.L03301 Eucalyptus grandis HOM05D006225 ORTHO05D007676 7.5e-17 92.4 77 59.7
BcaC04g24063 Brassica carinata HOM05D006225 ORTHO05D007676 1.7e-16 91.3 54 83.3
Lsat_1_v5_gn_0_24261 Lactuca sativa HOM05D006555 ORTHO05D008376 1.4e-15 88.2 327 23.9
Lalb_Chr04g0258611 Lupinus albus HOM05D006555 ORTHO05D008376 3.1e-15 87.0 335 23.9
MELO3C009917.2 Cucumis melo HOM05D006555 ORTHO05D008376 4.1e-15 86.7 273 24.5
MSTRG.3197 Avicennia marina HOM05D006555 ORTHO05D008376 1.2e-14 85.1 327 24.5
arahy.Tifrunner.gnm1.ann1.LDE0EK Arachis hypogaea HOM05D006555 ORTHO05D008376 4.5e-14 83.2 231 25.5
Duzib187G0608 Durio zibethinus HOM05D006555 ORTHO05D008376 1.7e-13 81.3 333 24.6
HanXRQChr15g0474321 Helianthus annuus HOM05D006555 ORTHO05D008376 2.9e-13 80.5 307 23.1
PSO013G0385 Papaver somniferum HOM05D006555 ORTHO05D008376 2.9e-13 80.5 352 24.1
PSO832G4179 Papaver somniferum HOM05D006555 ORTHO05D008376 3.8e-13 80.1 338 24.6
Potri.005G110300 Populus trichocarpa HOM05D006555 ORTHO05D008376 1.9e-12 77.8 249 26.9
Sabra05G0090500 Salix brachista HOM05D006555 ORTHO05D008376 7.3e-12 75.9 243 28.0
Ah.01g015770 Amaranthus hybridus HOM05D006555 ORTHO05D008376 2.1e-11 74.3 311 23.8
Manes.17G119457 Manihot esculenta HOM05D006555 ORTHO05D008376 1.4e-10 71.6 261 24.5
ECA246G4860 Erigeron canadensis HOM05D006555 ORTHO05D008376 2.3e-10 70.9 235 23.8
Glyma.08G102000 Glycine max HOM05D006555 ORTHO05D008376 1.2e-09 68.6 262 25.2
AUR62005932 Chenopodium quinoa HOM05D006555 ORTHO05D008376 1.7e-08 64.7 235 23.8
AUR62005935 Chenopodium quinoa HOM05D006555 ORTHO05D008376 1.7e-08 64.7 235 23.8
VMungo0251G3141 Vigna mungo HOM05D006555 ORTHO05D008376 4.9e-08 63.2 261 23.8
Phvul.002G176300 Phaseolus vulgaris HOM05D006555 ORTHO05D008376 1.1e-07 62.0 261 23.4
SEGI_26593 Sequoiadendron giganteum HOM05D006555 ORTHO05D008376 1.4e-07 61.6 137 26.3


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