Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g27189 Brassica carinata HOM05D066470 ORTHO05D009842 5.9e-152 540.8 269 100.0
BcaB08g36901 Brassica carinata HOM05D066470 ORTHO05D009842 5.9e-67 258.5 139 93.5
BcaB08g36239 Brassica carinata HOM05D004593 ORTHO05D003703 1.6e-40 170.6 149 60.4
BolC7t41062H Brassica oleracea HOM05D008384 ORTHO05D009842 5.4e-36 155.6 125 62.4
BcaB07g31665 Brassica carinata HOM05D008384 ORTHO05D009842 3.6e-32 142.9 153 50.3
C01p40360 Brassica napus HOM05D008384 ORTHO05D009842 2.0e-30 137.1 113 55.8
BolC2t07876H Brassica oleracea HOM05D008384 ORTHO05D009842 3.1e-28 129.8 153 47.1
C07p35890 Brassica napus HOM05D008384 ORTHO05D016044 2.7e-27 126.7 146 47.3
BcaC08g45148 Brassica carinata HOM05D008384 ORTHO05D009842 5.9e-27 125.6 242 36.8
BolC2t10222H Brassica oleracea HOM05D008384 ORTHO05D009842 2.3e-26 123.6 118 51.7
BcaB05g24894 Brassica carinata HOM05D008384 ORTHO05D009842 1.1e-25 121.3 150 44.7
BcaB03g14887 Brassica carinata HOM05D008384 ORTHO05D009842 1.9e-25 120.6 109 52.3
C03p24860 Brassica napus HOM05D008384 ORTHO05D009842 5.6e-25 119.0 150 38.7
C09p31540 Brassica napus HOM05D008384 ORTHO05D042359 2.0e-19 100.5 95 50.5
BcaB07g33986 Brassica carinata HOM05D008384 ORTHO05D009842 4.6e-19 99.4 118 39.0
BcaB01g01529 Brassica carinata HOM05D008384 ORTHO05D009842 1.7e-18 97.4 134 40.3
BcaB05g23720 Brassica carinata HOM05D008384 ORTHO05D009842 1.7e-18 97.4 97 46.4
C06p00830 Brassica napus HOM05D008384 ORTHO05D009842 3.3e-17 93.2 154 37.0
BcaB07g33659 Brassica carinata HOM05D008384 ORTHO05D009842 4.3e-17 92.8 109 38.5
BolC9t56010H Brassica oleracea HOM05D008384 ORTHO05D042359 3.6e-16 89.7 82 52.4
BcaC01g03468 Brassica carinata HOM05D008384 ORTHO05D009842 4.7e-16 89.4 113 40.7
BolC1t03992H Brassica oleracea HOM05D008384 ORTHO05D009842 1.5e-14 84.3 90 46.7
BcaB07g33633 Brassica carinata HOM05D008384 ORTHO05D009842 2.6e-14 83.6 106 40.6
C03p31500 Brassica napus HOM05D015892 ORTHO05D009842 5.8e-14 82.4 113 38.1
C05p38720 Brassica napus HOM05D034814 ORTHO05D039365 4.9e-13 79.3 141 36.9
BraA04t16529Z Brassica rapa HOM05D015892 ORTHO05D009842 4.9e-13 79.3 113 38.9
BolC2t11345H Brassica oleracea HOM05D008384 ORTHO05D009842 1.1e-12 78.2 83 47.0
BcaB08g34566 Brassica carinata HOM05D005627 ORTHO05D009842 1.4e-12 77.8 99 39.4
BcaB08g34625 Brassica carinata HOM05D008384 ORTHO05D009842 1.4e-12 77.8 69 52.2
BcaB07g33832 Brassica carinata HOM05D008384 ORTHO05D009842 4.1e-12 76.3 105 44.8
A07p06840 Brassica napus HOM05D008384 ORTHO05D009842 4.1e-12 76.3 147 29.9
C04p42370 Brassica napus HOM05D015892 ORTHO05D009842 5.4e-12 75.9 111 36.9
C07p60290 Brassica napus HOM05D015892 ORTHO05D009842 9.2e-12 75.1 111 35.1
C09p22240 Brassica napus HOM05D008384 ORTHO05D016044 2.7e-11 73.6 101 40.6
BraA07t28814Z Brassica rapa HOM05D006289 ORTHO05D009842 3.5e-11 73.2 113 37.2
BcaB02g10844 Brassica carinata HOM05D006289 ORTHO05D016037 1.7e-10 70.9 148 33.8
A01p24510 Brassica napus HOM05D006289 ORTHO05D016037 3.9e-10 69.7 113 33.6
BcaB01g00831 Brassica carinata HOM05D005627 ORTHO05D009842 6.6e-10 68.9 97 34.0
BcaB01g00118 Brassica carinata HOM05D005627 ORTHO05D009842 1.1e-09 68.2 99 33.3
BcaB01g01914 Brassica carinata HOM05D005627 ORTHO05D009842 2.5e-09 67.0 121 30.6
BcaB01g01127 Brassica carinata HOM05D006289 ORTHO05D017564 3.3e-09 66.6 125 32.8
BraA04t16495Z Brassica rapa HOM05D006289 ORTHO05D016037 3.3e-09 66.6 113 32.7
A10p07450 Brassica napus HOM05D006289 ORTHO05D009842 4.3e-09 66.2 111 35.1
BcaB04g19296 Brassica carinata HOM05D006289 ORTHO05D017564 5.6e-09 65.9 147 32.0
BcaC03g14591 Brassica carinata HOM05D008384 ORTHO05D009842 1.2e-08 64.7 79 41.8
BcaC06g35485 Brassica carinata HOM05D006289 ORTHO05D016037 1.2e-08 64.7 111 32.4
BolC7t42041H Brassica oleracea HOM05D006289 ORTHO05D016037 1.2e-08 64.7 111 32.4
BcaB04g19628 Brassica carinata HOM05D005627 ORTHO05D017564 2.1e-08 63.9 145 29.0
BraA05t20010Z Brassica rapa HOM05D006289 ORTHO05D028190 2.1e-08 63.9 113 31.9
A09p28380 Brassica napus HOM05D005627 ORTHO05D021730 2.8e-08 63.5 99 31.3
C03p74240 Brassica napus HOM05D006289 ORTHO05D028190 2.8e-08 63.5 145 29.0
BolC3t19682H Brassica oleracea HOM05D006289 ORTHO05D028190 2.8e-08 63.5 145 29.0
C03p32490 Brassica napus HOM05D008384 ORTHO05D009842 6.2e-08 62.4 53 52.8
BolC2t11294H Brassica oleracea HOM05D006289 ORTHO05D002086 6.2e-08 62.4 99 34.3
BraA05t20012Z Brassica rapa HOM05D005627 ORTHO05D021730 8.1e-08 62.0 99 33.3
A03p68400 Brassica napus HOM05D005627 ORTHO05D017564 1.1e-07 61.6 121 27.3
AL1G51920 Arabidopsis lyrata HOM05D024522 ORTHO05D023612 1.4e-07 61.2 107 28.0
BcaC04g19885 Brassica carinata HOM05D005627 ORTHO05D017564 1.4e-07 61.2 96 30.2
C02p52110 Brassica napus HOM05D005627 ORTHO05D040212 1.4e-07 61.2 147 27.9
C07p15540 Brassica napus HOM05D006289 ORTHO05D016037 1.4e-07 61.2 148 27.7
BolC2t11295H Brassica oleracea HOM05D005627 ORTHO05D040212 1.4e-07 61.2 147 27.9
BcaB03g16259 Brassica carinata HOM05D005627 ORTHO05D021730 1.8e-07 60.8 124 29.8
BcaC01g04902 Brassica carinata HOM05D008384 ORTHO05D009842 1.8e-07 60.8 74 43.2
BraA01t02617Z Brassica rapa HOM05D005627 ORTHO05D017564 2.3e-07 60.5 156 25.6
SpUn0001_0070 Schrenkiella parvula HOM05D008384 ORTHO05D009842 4.0e-07 59.7 100 38.0
BraA10t42593Z Brassica rapa HOM05D006289 ORTHO05D009842 5.2e-07 59.3 113 31.0
BcaC05g27035 Brassica carinata HOM05D006289 ORTHO05D032057 6.8e-07 58.9 101 35.6
BcaC08g46979 Brassica carinata HOM05D005627 ORTHO05D019933 6.8e-07 58.9 99 32.3
C05p28920 Brassica napus HOM05D006289 ORTHO05D032057 6.8e-07 58.9 101 35.6
BolC5t31614H Brassica oleracea HOM05D006289 ORTHO05D032057 6.8e-07 58.9 101 35.6
BcaC08g47004 Brassica carinata HOM05D005627 ORTHO05D019933 8.9e-07 58.5 99 30.3
BraA02t08907Z Brassica rapa HOM05D001038 ORTHO05D000395 8.9e-07 58.5 113 24.8
AL1G46390 Arabidopsis lyrata HOM05D024522 ORTHO05D023612 1.2e-06 58.2 107 29.0
C07p12180 Brassica napus HOM05D005627 ORTHO05D011976 1.2e-06 58.2 121 28.9
BcaC05g27033 Brassica carinata HOM05D005627 ORTHO05D031886 1.5e-06 57.8 100 33.0
A02p12540 Brassica napus HOM05D006289 ORTHO05D009842 1.5e-06 57.8 113 30.1
A10p17400 Brassica napus HOM05D008838 ORTHO05D028150 1.5e-06 57.8 175 22.3
C05p28910 Brassica napus HOM05D005627 ORTHO05D031886 1.5e-06 57.8 100 33.0
BolC4t22877H Brassica oleracea HOM05D009590 ORTHO05D014118 1.5e-06 57.8 107 29.9
BolC5t31612H Brassica oleracea HOM05D005627 ORTHO05D031886 1.5e-06 57.8 100 33.0
BraA10t43450Z Brassica rapa HOM05D006289 ORTHO05D009842 1.5e-06 57.8 113 30.1
C04p12300 Brassica napus HOM05D009590 ORTHO05D014118 2.0e-06 57.4 107 29.9
BcaB05g23251 Brassica carinata HOM05D005627 ORTHO05D009842 2.6e-06 57.0 111 32.4
C06p38200 Brassica napus HOM05D005627 ORTHO05D011976 2.6e-06 57.0 110 30.0
A09p28360 Brassica napus HOM05D006289 ORTHO05D027118 3.4e-06 56.6 113 29.2
BcaC02g11662 Brassica carinata HOM05D005627 ORTHO05D011792 4.4e-06 56.2 123 28.5
C04p12610 Brassica napus HOM05D005627 ORTHO05D011792 4.4e-06 56.2 123 28.5
BraA05t21307Z Brassica rapa HOM05D006289 ORTHO05D009842 4.4e-06 56.2 113 30.1
A04p11360 Brassica napus HOM05D005627 ORTHO05D019933 5.8e-06 55.8 99 32.3
BraA04t16798Z Brassica rapa HOM05D005627 ORTHO05D019933 5.8e-06 55.8 99 32.3
BolC7t41413H Brassica oleracea HOM05D005627 ORTHO05D011976 9.9e-06 55.1 110 29.1
BolC7t41682H Brassica oleracea HOM05D005627 ORTHO05D011976 9.9e-06 55.1 110 27.3
BraA01t02898Z Brassica rapa HOM05D009590 ORTHO05D014118 9.9e-06 55.1 107 29.9


User provided reference genes

Program Settings