Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g27187 Brassica carinata HOM05D000675 ORTHO05D002086 2.6e-33 144.8 73 100.0
BcaB05g24191 Brassica carinata HOM05D000675 ORTHO05D002086 5.5e-28 127.1 72 86.1
BcaC04g22824 Brassica carinata HOM05D000675 ORTHO05D002086 1.6e-27 125.6 72 81.9
BcaC03g15594 Brassica carinata HOM05D000675 ORTHO05D002086 2.7e-27 124.8 72 81.9
BcaC03g16749 Brassica carinata HOM05D000675 ORTHO05D002086 8.0e-27 123.2 70 82.9
BcaC05g25703 Brassica carinata HOM05D000675 ORTHO05D002086 1.8e-26 122.1 72 80.6
BcaC08g42855 Brassica carinata HOM05D000675 ORTHO05D002086 1.8e-26 122.1 72 80.6
BcaC09g48980 Brassica carinata HOM05D000675 ORTHO05D002086 6.8e-26 120.2 72 79.2
BcaC09g48982 Brassica carinata HOM05D000675 ORTHO05D002086 6.8e-26 120.2 72 79.2
BcaC05g28481 Brassica carinata HOM05D000675 ORTHO05D002086 1.2e-25 119.4 72 79.2
BcaC05g27596 Brassica carinata HOM05D000675 ORTHO05D002086 1.5e-25 119.0 72 80.6
BolC4t25850H Brassica oleracea HOM05D000675 ORTHO05D002086 4.4e-25 117.5 72 76.4
BcaC08g44362 Brassica carinata HOM05D000675 ORTHO05D002086 5.5e-20 100.5 70 65.7
BcaB03g14368 Brassica carinata HOM05D000675 ORTHO05D002086 1.7e-16 89.0 61 65.6
BcaC09g49807 Brassica carinata HOM05D000675 ORTHO05D002086 1.7e-16 89.0 61 65.6
BcaB07g33224 Brassica carinata HOM05D000675 ORTHO05D002086 1.2e-14 82.8 50 80.0
BcaC09g50385 Brassica carinata HOM05D000675 ORTHO05D002086 1.6e-14 82.4 60 63.3
BcaB07g32893 Brassica carinata HOM05D000675 ORTHO05D002086 2.0e-14 82.0 63 58.7
BcaC03g16220 Brassica carinata HOM05D000675 ORTHO05D002086 2.0e-14 82.0 63 58.7
BolC5t32182H Brassica oleracea HOM05D000675 ORTHO05D002086 2.7e-14 81.6 63 60.3
BcaC05g27351 Brassica carinata HOM05D000675 ORTHO05D002086 3.5e-14 81.3 61 60.7
BcaC06g36214 Brassica carinata HOM05D000675 ORTHO05D002086 4.6e-14 80.9 63 58.7
BcaC05g29029 Brassica carinata HOM05D000675 ORTHO05D002086 1.3e-13 79.3 61 57.4
BcaC07g36914 Brassica carinata HOM05D000675 ORTHO05D002086 1.7e-13 79.0 63 57.1
BcaB03g15222 Brassica carinata HOM05D000977 ORTHO05D001094 2.3e-13 78.6 63 60.3
BcaB01g03291 Brassica carinata HOM05D000675 ORTHO05D002086 3.9e-13 77.8 63 58.7
BcaB04g17253 Brassica carinata HOM05D000977 ORTHO05D001094 5.0e-13 77.4 63 58.7
BcaB08g35730 Brassica carinata HOM05D000675 ORTHO05D002086 6.6e-13 77.0 63 60.3
BcaC06g35366 Brassica carinata HOM05D000675 ORTHO05D002086 1.1e-12 76.3 63 61.9
BcaC01g02708 Brassica carinata HOM05D000977 ORTHO05D001094 4.3e-12 74.3 61 57.4
BcaC02g11404 Brassica carinata HOM05D000675 ORTHO05D002086 4.3e-12 74.3 55 61.8
BcaC03g17205 Brassica carinata HOM05D000675 ORTHO05D002086 2.1e-11 72.0 61 59.0
BcaB05g22219 Brassica carinata HOM05D000675 ORTHO05D002086 8.0e-11 70.1 63 54.0
BcaC05g28255 Brassica carinata HOM05D000675 ORTHO05D002086 1.0e-10 69.7 52 63.5
BolC6t36479H Brassica oleracea HOM05D000977 ORTHO05D001094 1.0e-10 69.7 72 47.2
BcaB05g21895 Brassica carinata HOM05D000675 ORTHO05D002086 1.8e-10 68.9 63 54.0
BcaB08g35649 Brassica carinata HOM05D000977 ORTHO05D001094 1.8e-10 68.9 63 50.8
BcaC03g17964 Brassica carinata HOM05D000675 ORTHO05D023943 5.2e-10 67.4 67 47.8
BcaC06g34450 Brassica carinata HOM05D000675 ORTHO05D002086 1.2e-09 66.2 51 62.7
BcaC08g43134 Brassica carinata HOM05D000675 ORTHO05D023943 1.5e-09 65.9 72 45.8
BcaC05g28779 Brassica carinata HOM05D000977 ORTHO05D001094 3.4e-09 64.7 54 57.4
BolC1t02513H Brassica oleracea HOM05D000675 ORTHO05D023943 7.5e-09 63.5 67 47.8
BolC2t11221H Brassica oleracea HOM05D000675 ORTHO05D002086 9.8e-09 63.2 51 62.7
BcaC06g35605 Brassica carinata HOM05D000675 ORTHO05D002086 2.2e-08 62.0 51 60.8
BolC2t12077H Brassica oleracea HOM05D000675 ORTHO05D023943 6.4e-08 60.5 65 46.2
BcaC05g25361 Brassica carinata HOM05D000675 ORTHO05D002086 1.9e-07 58.9 66 50.0
C06p04090 Brassica napus HOM05D000675 ORTHO05D023943 4.1e-07 57.8 49 61.2
C06p04160 Brassica napus HOM05D000977 ORTHO05D001094 4.1e-07 57.8 49 61.2
BcaC05g26255 Brassica carinata HOM05D000675 ORTHO05D002086 2.0e-06 55.5 51 56.9
BcaC01g04356 Brassica carinata HOM05D000675 ORTHO05D002086 4.6e-06 54.3 67 46.3


User provided reference genes

Program Settings