Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g27133 Brassica carinata HOM05D034447 ORTHO05D021583 3.6e-38 161.0 76 100.0
BcaB07g33236 Brassica carinata HOM05D034447 ORTHO05D021583 7.3e-23 110.2 58 89.7
BcaB04g18465 Brassica carinata HOM05D034447 ORTHO05D021583 2.4e-13 78.6 36 94.4
C05p00200 Brassica napus HOM05D000313 ORTHO05D000065 5.8e-12 73.9 56 58.9
C06p47470 Brassica napus HOM05D000313 ORTHO05D000065 5.8e-12 73.9 56 58.9
C07p05180 Brassica napus HOM05D000313 ORTHO05D000065 5.8e-12 73.9 56 58.9
BolC6t37005H Brassica oleracea HOM05D000313 ORTHO05D000065 5.8e-12 73.9 56 58.9
BraA08t32937Z Brassica rapa HOM05D000313 ORTHO05D000065 5.8e-12 73.9 56 58.9
C02p35780 Brassica napus HOM05D016228 ORTHO05D022029 3.8e-11 71.2 49 67.3
BolC9t54870H Brassica oleracea HOM05D000313 ORTHO05D000065 1.4e-10 69.3 72 48.6
C09p19680 Brassica napus HOM05D000313 ORTHO05D013032 1.9e-10 68.9 57 54.4
BcaB05g24332 Brassica carinata HOM05D000313 ORTHO05D000065 3.2e-10 68.2 56 53.6
BcaC03g14692 Brassica carinata HOM05D000313 ORTHO05D000065 4.1e-10 67.8 56 55.4
BcaC04g22409 Brassica carinata HOM05D005044 ORTHO05D000065 4.1e-10 67.8 56 55.4
C04p53440 Brassica napus HOM05D000313 ORTHO05D000065 9.2e-10 66.6 56 48.2
BolC4t26899H Brassica oleracea HOM05D000313 ORTHO05D000065 9.2e-10 66.6 56 48.2
BraA09t40035Z Brassica rapa HOM05D000313 ORTHO05D000065 1.2e-09 66.2 56 48.2
BolC6t36306H Brassica oleracea HOM05D000313 ORTHO05D000065 3.5e-09 64.7 56 48.2
BolC5t31140H Brassica oleracea HOM05D000313 ORTHO05D000065 4.6e-09 64.3 56 50.0
BcaB05g24149 Brassica carinata HOM05D000313 ORTHO05D000065 7.8e-09 63.5 62 46.8
BolC2t10493H Brassica oleracea HOM05D000313 ORTHO05D000065 7.8e-09 63.5 56 46.4
BcaC08g43795 Brassica carinata HOM05D000313 ORTHO05D021935 1.7e-08 62.4 53 47.2
C06p11720 Brassica napus HOM05D000313 ORTHO05D000065 1.7e-08 62.4 53 49.1
BcaB02g06416 Brassica carinata HOM05D000313 ORTHO05D000065 2.3e-08 62.0 59 47.5
BcaB04g17642 Brassica carinata HOM05D000313 ORTHO05D000065 2.3e-08 62.0 56 46.4
C09p55240 Brassica napus HOM05D000305 ORTHO05D000065 2.3e-08 62.0 56 55.4
BraA06t24994Z Brassica rapa HOM05D035275 ORTHO05D021583 2.3e-08 62.0 44 63.6
BcaB07g32488 Brassica carinata HOM05D000313 ORTHO05D000065 3.0e-08 61.6 50 52.0
BolC6t36657H Brassica oleracea HOM05D000305 ORTHO05D000065 3.0e-08 61.6 61 47.5
BcaB05g24563 Brassica carinata HOM05D000313 ORTHO05D013032 3.9e-08 61.2 61 50.8
C04p39840 Brassica napus HOM05D000313 ORTHO05D013032 3.9e-08 61.2 53 54.7
A09p35480 Brassica napus HOM05D000305 ORTHO05D000065 5.1e-08 60.8 61 44.3
BcaB07g33009 Brassica carinata HOM05D000313 ORTHO05D000065 6.6e-08 60.5 52 48.1
BcaC04g18697 Brassica carinata HOM05D000313 ORTHO05D000065 6.6e-08 60.5 53 50.9
A09p51680 Brassica napus HOM05D000313 ORTHO05D013032 6.6e-08 60.5 53 52.8
A09p30460 Brassica napus HOM05D000305 ORTHO05D000065 8.7e-08 60.1 61 45.9
C06p14790 Brassica napus HOM05D000305 ORTHO05D000065 8.7e-08 60.1 56 53.6
BolC4t25557H Brassica oleracea HOM05D000313 ORTHO05D000065 8.7e-08 60.1 53 52.8
BolC6t37050H Brassica oleracea HOM05D000313 ORTHO05D000065 8.7e-08 60.1 61 42.6
BraA05t19977Z Brassica rapa HOM05D000313 ORTHO05D000065 8.7e-08 60.1 53 49.1
A06p19110 Brassica napus HOM05D035275 ORTHO05D021583 1.1e-07 59.7 44 61.4
C03p67840 Brassica napus HOM05D000313 ORTHO05D000065 1.1e-07 59.7 53 49.1
BolSC21t60252H Brassica oleracea HOM05D000313 ORTHO05D000065 1.1e-07 59.7 53 49.1
A09p30430 Brassica napus HOM05D000313 ORTHO05D013032 1.5e-07 59.3 61 45.9
A10p33690 Brassica napus HOM05D000313 ORTHO05D000065 1.5e-07 59.3 61 41.0
BolC2t08209H Brassica oleracea HOM05D000313 ORTHO05D000065 1.5e-07 59.3 62 40.3
BolC7t45455H Brassica oleracea HOM05D000313 ORTHO05D000065 1.5e-07 59.3 56 48.2
BcaC01g02207 Brassica carinata HOM05D000313 ORTHO05D009979 2.5e-07 58.5 48 56.2
BolC1t02308H Brassica oleracea HOM05D000313 ORTHO05D000065 2.5e-07 58.5 53 49.1
BolC3t15032H Brassica oleracea HOM05D000305 ORTHO05D000065 2.5e-07 58.5 61 41.0
BolC5t30813H Brassica oleracea HOM05D000313 ORTHO05D000065 2.5e-07 58.5 41 58.5
BraA09t38616Z Brassica rapa HOM05D000305 ORTHO05D000065 2.5e-07 58.5 52 48.1
BcaB01g04686 Brassica carinata HOM05D000313 ORTHO05D000065 4.3e-07 57.8 51 47.1
BcaB08g35651 Brassica carinata HOM05D000313 ORTHO05D000065 4.3e-07 57.8 58 48.3
C02p20670 Brassica napus HOM05D000313 ORTHO05D000065 4.3e-07 57.8 62 38.7
BcaC03g16108 Brassica carinata HOM05D000313 ORTHO05D000065 5.6e-07 57.4 53 47.2
A05p26210 Brassica napus HOM05D000313 ORTHO05D013032 5.6e-07 57.4 48 54.2
C08p04870 Brassica napus HOM05D000313 ORTHO05D000065 5.6e-07 57.4 56 50.0
BcaC02g09189 Brassica carinata HOM05D000313 ORTHO05D013032 7.3e-07 57.0 48 54.2
BolC8t47526H Brassica oleracea HOM05D000280 ORTHO05D003998 7.3e-07 57.0 54 46.3
C04p18760 Brassica napus HOM05D000313 ORTHO05D000065 9.6e-07 56.6 57 45.6
C05p31210 Brassica napus HOM05D000313 ORTHO05D000065 9.6e-07 56.6 44 52.3
Thhalv10005358m.g Eutrema salsugineum HOM05D000313 ORTHO05D000065 9.6e-07 56.6 49 46.9
BolC4t23415H Brassica oleracea HOM05D000313 ORTHO05D000065 1.2e-06 56.2 55 47.3
A06p21660 Brassica napus HOM05D000305 ORTHO05D000065 1.6e-06 55.8 55 45.5
C08p06840 Brassica napus HOM05D000280 ORTHO05D003998 1.6e-06 55.8 52 48.1
BolC6t37857H Brassica oleracea HOM05D000313 ORTHO05D013032 2.1e-06 55.5 53 45.3
C08p01640 Brassica napus HOM05D000313 ORTHO05D000065 3.6e-06 54.7 53 49.1
BcaC02g10952 Brassica carinata HOM05D000313 ORTHO05D000065 4.7e-06 54.3 56 41.1
C01p21550 Brassica napus HOM05D000313 ORTHO05D000065 4.7e-06 54.3 52 46.2
C04p23330 Brassica napus HOM05D000313 ORTHO05D000065 4.7e-06 54.3 56 41.1
C06p26830 Brassica napus HOM05D000313 ORTHO05D000065 4.7e-06 54.3 48 52.1
BolC1t02075H Brassica oleracea HOM05D000313 ORTHO05D000065 4.7e-06 54.3 52 46.2
C07p49510 Brassica napus HOM05D000313 ORTHO05D013032 8.1e-06 53.5 47 48.9


User provided reference genes

Program Settings