Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g27040 Brassica carinata HOM05D000079 ORTHO05D007419 3.0e-57 224.9 112 100.0
BcaC01g05414 Brassica carinata HOM05D000079 ORTHO05D007419 5.9e-29 131.0 83 78.3
C03p26870 Brassica napus HOM05D000079 ORTHO05D007419 5.9e-29 131.0 83 78.3
A03p22670 Brassica napus HOM05D000079 ORTHO05D007419 7.7e-29 130.6 83 78.3
BraA03t11490Z Brassica rapa HOM05D000079 ORTHO05D007419 7.7e-29 130.6 83 78.3
BolC3t15070H Brassica oleracea HOM05D000079 ORTHO05D007419 1.3e-28 129.8 83 77.1
Sp4g22570 Schrenkiella parvula HOM05D000079 ORTHO05D007419 1.4e-27 126.3 104 69.2
BcaB01g03552 Brassica carinata HOM05D000079 ORTHO05D007419 1.9e-27 125.9 84 77.4
AT2G40230 Arabidopsis thaliana HOM05D000079 ORTHO05D007419 9.4e-27 123.6 90 74.4
BcaC02g07366 Brassica carinata HOM05D000079 ORTHO05D007419 1.2e-26 123.2 83 77.1
AL4G37950 Arabidopsis lyrata HOM05D000079 ORTHO05D007419 1.6e-26 122.9 90 74.4
Carub.0004s2244 Capsella rubella HOM05D000079 ORTHO05D007419 1.4e-25 119.8 83 74.7
A05p06210 Brassica napus HOM05D000079 ORTHO05D007419 3.0e-25 118.6 86 73.3
BraA05t19585Z Brassica rapa HOM05D000079 ORTHO05D007419 3.0e-25 118.6 86 73.3
CARHR135260 Cardamine hirsuta HOM05D000079 ORTHO05D007419 3.0e-25 118.6 90 72.2
C04p67890 Brassica napus HOM05D000079 ORTHO05D007419 8.8e-25 117.1 86 73.3
BolC4t28294H Brassica oleracea HOM05D000079 ORTHO05D007419 8.8e-25 117.1 86 73.3
Thhalv10016665m.g Eutrema salsugineum HOM05D000079 ORTHO05D007419 1.5e-24 116.3 90 70.0
BcaC02g12140 Brassica carinata HOM05D000079 ORTHO05D007419 2.0e-24 115.9 86 72.1
C04p07160 Brassica napus HOM05D000079 ORTHO05D007419 2.0e-24 115.9 86 72.1
BolC4t22340H Brassica oleracea HOM05D000079 ORTHO05D007419 2.0e-24 115.9 86 72.1
BcaB02g09038 Brassica carinata HOM05D000079 ORTHO05D007419 2.6e-24 115.5 83 73.5
A04p29940 Brassica napus HOM05D000079 ORTHO05D007419 2.6e-24 115.5 86 73.3
BraA04t18514Z Brassica rapa HOM05D000079 ORTHO05D007419 2.6e-24 115.5 86 73.3
THA.LOC104824324 Tarenaya hassleriana HOM05D000079 ORTHO05D007419 1.3e-20 103.2 86 65.1
Aa31LG5G19340 Aethionema arabicum HOM05D000079 ORTHO05D007419 5.5e-19 97.8 85 65.9
ECA232G0046 Erigeron canadensis HOM05D000079 ORTHO05D007419 2.7e-18 95.5 82 59.8
Haze_17250 Corylus avellana HOM05D000079 ORTHO05D007419 6.7e-17 90.9 101 50.5
Cfa001297 Carpinus fangiana HOM05D000079 ORTHO05D007419 2.6e-16 89.0 101 49.5
QL08p063492 Quercus lobata HOM05D000079 ORTHO05D007419 2.6e-16 89.0 83 55.4
Duzib114G0958 Durio zibethinus HOM05D000079 ORTHO05D007419 4.4e-16 88.2 82 54.9
CANSAT56G4336 Cannabis sativa HOM05D000079 ORTHO05D007419 5.7e-16 87.8 83 57.8
Gohir.D10G251300 Gossypium hirsutum HOM05D000079 ORTHO05D007419 5.7e-16 87.8 82 53.7
Gorai.011G291700 Gossypium raimondii HOM05D000079 ORTHO05D007419 5.7e-16 87.8 82 53.7
HanXRQChr14g0459441 Helianthus annuus HOM05D000079 ORTHO05D007419 5.7e-16 87.8 82 54.9
Lsat_1_v5_gn_9_62441 Lactuca sativa HOM05D000079 ORTHO05D007419 5.7e-16 87.8 82 56.1
COL.COLO4_25770 Corchorus olitorius HOM05D000079 ORTHO05D007419 1.3e-15 86.7 82 54.9
Atru.chr12.89 Acer truncatum HOM05D000079 ORTHO05D007419 1.7e-15 86.3 86 52.3
CiPaw.01G300600 Carya illinoinensis HOM05D000079 ORTHO05D007419 1.7e-15 86.3 83 54.2
Duzib106G0474 Durio zibethinus HOM05D000079 ORTHO05D007419 1.7e-15 86.3 82 53.7
FAN01G0104 Fragaria x ananassa HOM05D000079 ORTHO05D007419 1.7e-15 86.3 82 53.7
Phvul.008G222300 Phaseolus vulgaris HOM05D000079 ORTHO05D007419 1.7e-15 86.3 83 55.4
GSVIVG01032784001 Vitis vinifera HOM05D000079 ORTHO05D007419 1.7e-15 86.3 82 58.5
Nitab4.5_0001282g0030 Nicotiana tabacum HOM05D000079 ORTHO05D007419 2.2e-15 85.9 82 58.5
BcaC02g10984 Brassica carinata HOM05D000079 ORTHO05D007419 2.8e-15 85.5 60 73.3
C04p22480 Brassica napus HOM05D000079 ORTHO05D007419 2.8e-15 85.5 60 73.3
Cpa.g.sc1288.1 Carica papaya HOM05D000079 ORTHO05D007419 2.8e-15 85.5 80 53.8
Sabra10G0143500 Salix brachista HOM05D000079 ORTHO05D007419 2.8e-15 85.5 82 56.1
Nitab4.5_0000058g0290 Nicotiana tabacum HOM05D000079 ORTHO05D007419 3.7e-15 85.1 94 53.2
FAN06G4474 Fragaria x ananassa HOM05D000079 ORTHO05D007419 4.8e-15 84.7 82 52.4
Gohir.A10G239400 Gossypium hirsutum HOM05D000079 ORTHO05D007419 4.8e-15 84.7 82 52.4
Potri.010G186300 Populus trichocarpa HOM05D000079 ORTHO05D007419 4.8e-15 84.7 82 56.1
Prupe.2G253100 Prunus persica HOM05D000079 ORTHO05D007419 4.8e-15 84.7 83 53.0
arahy.Tifrunner.gnm1.ann1.KFWY3N Arachis hypogaea HOM05D000079 ORTHO05D007419 6.3e-15 84.3 95 48.4
arahy.Tifrunner.gnm1.ann1.NZ5XIR Arachis hypogaea HOM05D000079 ORTHO05D007419 6.3e-15 84.3 95 48.4
FAN03G0060 Fragaria x ananassa HOM05D000079 ORTHO05D007419 6.3e-15 84.3 82 52.4
TWI73G0022 Tripterygium wilfordii HOM05D000079 ORTHO05D007419 6.3e-15 84.3 82 53.7
MD07G1224500 Malus domestica HOM05D000079 ORTHO05D007419 8.2e-15 84.0 83 51.8
Peaxi162Scf00284g00076 Petunia axillaris HOM05D000079 ORTHO05D007419 8.2e-15 84.0 92 51.1
Sabra08G0052500 Salix brachista HOM05D000079 ORTHO05D007419 8.2e-15 84.0 82 53.7
MD01G1155600 Malus domestica HOM05D000079 ORTHO05D007419 1.1e-14 83.6 83 51.8
Nn2g13204 Nelumbo nucifera HOM05D000079 ORTHO05D007419 1.1e-14 83.6 82 53.7
RcHm_v2.0_Chr1g0370641 Rosa chinensis HOM05D000079 ORTHO05D007419 1.1e-14 83.6 82 52.4
VMungo0647G1085 Vigna mungo HOM05D000079 ORTHO05D007419 1.1e-14 83.6 83 53.0
Lj1P959T47 Lonicera japonica HOM05D000079 ORTHO05D007419 1.4e-14 83.2 94 48.9
Solyc06g051130.1 Solanum lycopersicum HOM05D000079 ORTHO05D007419 1.4e-14 83.2 94 50.0
Sopen06g016960 Solanum pennellii HOM05D000079 ORTHO05D007419 1.4e-14 83.2 94 50.0
Hma1.2p1_0523F.1_g172120 Hydrangea macrophylla HOM05D000079 ORTHO05D007419 1.8e-14 82.8 82 53.7
Glyma.11G231600 Glycine max HOM05D000079 ORTHO05D007419 3.1e-14 82.0 83 54.2
FvH4_7g24780 Fragaria vesca HOM05D000079 ORTHO05D007419 4.1e-14 81.6 82 51.2
Potri.008G071200 Populus trichocarpa HOM05D000079 ORTHO05D007419 4.1e-14 81.6 82 51.2
ClCG07G004390 Citrullus lanatus HOM05D000079 ORTHO05D007419 5.3e-14 81.3 122 42.6
PGSC0003DMG400015650 Solanum tuberosum HOM05D000079 ORTHO05D007419 5.3e-14 81.3 94 50.0
TWI09G0757 Tripterygium wilfordii HOM05D000079 ORTHO05D007419 5.3e-14 81.3 82 51.2
Ciclev10031495m.g Citrus clementina HOM05D000079 ORTHO05D007419 7.0e-14 80.9 93 48.4
Dinv21753 Davidia involucrata HOM05D000079 ORTHO05D007419 1.2e-13 80.1 82 48.8
Migut.F00660 Erythranthe guttata HOM05D000079 ORTHO05D007419 1.2e-13 80.1 83 50.6
Glyma.02G264600 Glycine max HOM05D000079 ORTHO05D007419 1.2e-13 80.1 83 51.8
TAR131G0006 Trochodendron aralioides HOM05D000079 ORTHO05D007419 1.2e-13 80.1 82 53.7
TAR623G0889 Trochodendron aralioides HOM05D000079 ORTHO05D007419 1.2e-13 80.1 82 53.7
FAN10G2245 Fragaria x ananassa HOM05D000079 ORTHO05D007419 1.6e-13 79.7 82 50.0
Glyma.14G057700 Glycine max HOM05D000079 ORTHO05D007419 1.6e-13 79.7 83 53.0
Hma1.2p1_0292F.1_g115470 Hydrangea macrophylla HOM05D000079 ORTHO05D007419 1.6e-13 79.7 82 51.2
Hma1.2p1_2256F.1_g318220 Hydrangea macrophylla HOM05D000079 ORTHO05D007419 1.6e-13 79.7 82 51.2
TPR.G39865 Trifolium pratense HOM05D000079 ORTHO05D007419 1.6e-13 79.7 83 50.6
CiPaw.02G194100 Carya illinoinensis HOM05D000079 ORTHO05D007419 2.7e-13 79.0 83 51.8
Ah.16g103700 Amaranthus hybridus HOM05D000079 ORTHO05D007419 3.5e-13 78.6 82 47.6
AUR62022915 Chenopodium quinoa HOM05D000079 ORTHO05D007419 3.5e-13 78.6 82 51.2
AUR62012273 Chenopodium quinoa HOM05D000079 ORTHO05D007419 4.5e-13 78.2 80 52.5
Ca_15138_v3 Cicer arietinum L. HOM05D000079 ORTHO05D007419 5.9e-13 77.8 83 50.6
Thecc.10G013300 Theobroma cacao HOM05D000079 ORTHO05D007419 5.9e-13 77.8 82 50.0
Manes.07G132000 Manihot esculenta HOM05D000079 ORTHO05D007419 1.0e-12 77.0 82 50.0
Sed0004909 Sechium edule HOM05D000079 ORTHO05D007419 1.0e-12 77.0 122 45.9
VMungo1383G2404 Vigna mungo HOM05D000079 ORTHO05D007419 1.0e-12 77.0 83 51.8
ECA238G4101 Erigeron canadensis HOM05D000079 ORTHO05D007419 1.3e-12 76.6 101 44.6
Gohir.D04G069800 Gossypium hirsutum HOM05D000079 ORTHO05D007419 1.3e-12 76.6 82 53.7
Gorai.012G078300 Gossypium raimondii HOM05D000079 ORTHO05D007419 1.3e-12 76.6 82 53.7
MELO3C018368.2 Cucumis melo HOM05D000079 ORTHO05D007419 1.7e-12 76.3 122 41.8
Sc11g0005180 Simmondsia chinensis HOM05D000079 ORTHO05D007419 2.2e-12 75.9 82 47.6
PSO017G3731 Papaver somniferum HOM05D000079 ORTHO05D007419 2.9e-12 75.5 104 39.4
EL10Ac2g04861 Beta vulgaris HOM05D000079 ORTHO05D007419 3.8e-12 75.1 82 50.0
Gohir.A05G331100 Gossypium hirsutum HOM05D000079 ORTHO05D007419 3.8e-12 75.1 82 52.4
HanXRQChr15g0496061 Helianthus annuus HOM05D000079 ORTHO05D007419 3.8e-12 75.1 120 40.8
Lj6g0007548 Lotus japonicus HOM05D000079 ORTHO05D007419 3.8e-12 75.1 83 48.2
Phvul.001G244800 Phaseolus vulgaris HOM05D000079 ORTHO05D007419 3.8e-12 75.1 83 50.6
Lalb_Chr23g0277001 Lupinus albus HOM05D000079 ORTHO05D007419 6.5e-12 74.3 93 46.2
PSO170G0942 Papaver somniferum HOM05D000079 ORTHO05D007419 8.5e-12 73.9 104 41.3
HanXRQChr13g0396551 Helianthus annuus HOM05D000079 ORTHO05D007419 1.5e-11 73.2 120 40.0
Cc02_g06220 Coffea canephora HOM05D000079 ORTHO05D007419 1.9e-11 72.8 94 44.7
CsaV3_5G010320 Cucumis sativus L. HOM05D000079 ORTHO05D007419 2.5e-11 72.4 122 41.0
Ah.10g036380 Amaranthus hybridus HOM05D000079 ORTHO05D007419 4.2e-11 71.6 95 44.2
Medtr3g071320 Medicago truncatula HOM05D000079 ORTHO05D007419 4.2e-11 71.6 83 45.8
SalBow6G4021 Salvia bowleyana HOM05D000079 ORTHO05D007419 4.2e-11 71.6 83 45.8
MSTRG.27316 Avicennia marina HOM05D000079 ORTHO05D007419 5.5e-11 71.2 82 47.6
Psat5g130000 Pisum sativum HOM05D000079 ORTHO05D007419 5.5e-11 71.2 83 45.8
PGR044G2649 Punica granatum HOM05D000079 ORTHO05D007419 5.5e-11 71.2 82 47.6
BolC4t23763H Brassica oleracea HOM05D000079 ORTHO05D007419 2.1e-10 69.3 40 85.0
DCAR_011830 Daucus carota HOM05D000079 ORTHO05D007419 2.7e-10 68.9 80 51.2
AUR62028678 Chenopodium quinoa HOM05D000079 ORTHO05D007419 4.7e-10 68.2 82 46.3
MBI15_g28814_MAGBIO Magnolia biondii HOM05D000079 ORTHO05D007419 6.1e-10 67.8 82 46.3
Thhalv10017965m.g Eutrema salsugineum HOM05D000079 ORTHO05D007419 1.0e-09 67.0 49 69.4
MSTRG.8347 Avicennia marina HOM05D000079 ORTHO05D007419 2.3e-09 65.9 84 45.2
Rhsim03G0145400 Rhododendron simsii HOM05D000079 ORTHO05D007419 3.0e-09 65.5 82 43.9
CSS0006576 Camellia sinensis var. sinensis HOM05D000079 ORTHO05D007419 3.4e-08 62.0 81 45.7
CSS0036238 Camellia sinensis var. sinensis HOM05D000079 ORTHO05D007419 3.4e-08 62.0 82 45.1
Dinv10601 Davidia involucrata HOM05D000079 ORTHO05D007419 5.7e-08 61.2 76 43.4
Actinidia29710 Actinidia chinensis HOM05D000079 ORTHO05D007419 9.8e-08 60.5 82 43.9
Eucgr.J00186 Eucalyptus grandis HOM05D000079 ORTHO05D007419 3.7e-07 58.5 76 47.4
ATR0745G002 Amborella trichopoda HOM05D000079 ORTHO05D007419 1.8e-06 56.2 118 34.7
Eucgr.F01597 Eucalyptus grandis HOM05D000079 ORTHO05D006933 7.0e-06 54.3 92 39.1


User provided reference genes

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