Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g27029 Brassica carinata HOM05D002776 ORTHO05D011320 1.6e-48 195.7 92 100.0
BcaB06g26484 Brassica carinata HOM05D002776 ORTHO05D000395 2.7e-32 141.7 89 80.9
BcaB03g16296 Brassica carinata HOM05D002776 ORTHO05D000395 2.3e-31 138.7 88 79.5
BcaB03g15955 Brassica carinata HOM05D002776 ORTHO05D011320 2.0e-30 135.6 88 77.3
BcaB08g35015 Brassica carinata HOM05D002776 ORTHO05D011320 2.6e-30 135.2 88 77.3
BcaB05g23247 Brassica carinata HOM05D002776 ORTHO05D011320 5.7e-30 134.0 88 77.3
BcaB07g33087 Brassica carinata HOM05D002776 ORTHO05D011320 7.5e-30 133.7 90 77.8
BcaB07g33753 Brassica carinata HOM05D002776 ORTHO05D011320 9.7e-30 133.3 88 77.3
BcaB01g01630 Brassica carinata HOM05D002776 ORTHO05D011320 1.8e-28 129.0 85 77.6
C02p52040 Brassica napus HOM05D002776 ORTHO05D000395 2.4e-28 128.6 88 76.1
C07p38490 Brassica napus HOM05D002776 ORTHO05D011320 2.4e-28 128.6 88 76.1
BolC6t36736H Brassica oleracea HOM05D002776 ORTHO05D011320 2.4e-28 128.6 88 76.1
BraA03t15291Z Brassica rapa HOM05D002776 ORTHO05D000395 2.4e-28 128.6 86 76.7
A09p29650 Brassica napus HOM05D002776 ORTHO05D000395 5.3e-28 127.5 88 75.0
BraA09t38530Z Brassica rapa HOM05D002776 ORTHO05D000395 5.3e-28 127.5 88 75.0
C05p34920 Brassica napus HOM05D002776 ORTHO05D011320 7.0e-28 127.1 88 75.0
BcaC02g09778 Brassica carinata HOM05D002776 ORTHO05D011320 9.1e-28 126.7 88 75.0
C04p36700 Brassica napus HOM05D002776 ORTHO05D011320 9.1e-28 126.7 88 75.0
BolC3t18858H Brassica oleracea HOM05D002776 ORTHO05D000395 9.1e-28 126.7 88 75.0
C06p18050 Brassica napus HOM05D002776 ORTHO05D000395 1.6e-27 125.9 88 75.0
C03p66380 Brassica napus HOM05D002776 ORTHO05D003044 3.5e-27 124.8 88 73.9
C04p41830 Brassica napus HOM05D002776 ORTHO05D000395 3.5e-27 124.8 88 73.9
C07p49090 Brassica napus HOM05D002776 ORTHO05D003044 4.5e-27 124.4 88 73.9
C03p44570 Brassica napus HOM05D002776 ORTHO05D011320 1.0e-26 123.2 88 72.7
A01p26310 Brassica napus HOM05D002776 ORTHO05D011320 1.3e-26 122.9 88 72.7
A03p65940 Brassica napus HOM05D002776 ORTHO05D003044 1.3e-26 122.9 88 72.7
C02p53520 Brassica napus HOM05D002776 ORTHO05D003044 1.7e-26 122.5 88 73.9
C04p56090 Brassica napus HOM05D002776 ORTHO05D003044 1.7e-26 122.5 87 73.6
BcaC08g44059 Brassica carinata HOM05D002776 ORTHO05D011320 2.9e-26 121.7 88 73.9
A10p06580 Brassica napus HOM05D002776 ORTHO05D000395 5.0e-26 120.9 87 72.4
C01p30580 Brassica napus HOM05D002776 ORTHO05D003044 5.0e-26 120.9 88 72.7
C01p48980 Brassica napus HOM05D002776 ORTHO05D003542 5.0e-26 120.9 88 71.6
BraA09t40150Z Brassica rapa HOM05D002776 ORTHO05D011320 1.1e-25 119.8 88 71.6
A05p28380 Brassica napus HOM05D002776 ORTHO05D003044 1.9e-25 119.0 88 71.6
BraA08t32835Z Brassica rapa HOM05D002776 ORTHO05D011320 1.9e-25 119.0 88 70.5
A01p20490 Brassica napus HOM05D002776 ORTHO05D000395 2.5e-25 118.6 88 71.6
BcaC06g36687 Brassica carinata HOM05D002776 ORTHO05D011320 3.2e-25 118.2 88 71.6
A08p07570 Brassica napus HOM05D002776 ORTHO05D011320 3.2e-25 118.2 88 71.6
BcaC05g26787 Brassica carinata HOM05D002776 ORTHO05D011320 1.2e-24 116.3 88 72.7
C05p44730 Brassica napus HOM05D002776 ORTHO05D000395 1.0e-23 113.2 65 83.1
BcaB02g11313 Brassica carinata HOM05D002776 ORTHO05D000395 4.0e-23 111.3 88 68.2
BcaC07g39108 Brassica carinata HOM05D002776 ORTHO05D000395 2.2e-21 105.5 76 73.7
BcaB05g23078 Brassica carinata HOM05D002776 ORTHO05D011320 4.1e-20 101.3 69 73.9
BcaC06g33588 Brassica carinata HOM05D002776 ORTHO05D011320 2.7e-19 98.6 57 84.2
C03p65980 Brassica napus HOM05D002776 ORTHO05D003044 1.3e-18 96.3 88 62.5
BcaB02g06428 Brassica carinata HOM05D002776 ORTHO05D011320 1.1e-17 93.2 68 72.1
BraA09t38884Z Brassica rapa HOM05D002776 ORTHO05D000395 1.1e-17 93.2 77 62.3
C03p56210 Brassica napus HOM05D002776 ORTHO05D003044 5.5e-17 90.9 55 80.0
BcaB04g18118 Brassica carinata HOM05D002776 ORTHO05D000395 1.7e-13 79.3 55 74.5
BcaB03g16806 Brassica carinata HOM05D002776 ORTHO05D003044 2.4e-12 75.5 86 54.7
BcaB01g01307 Brassica carinata HOM05D002776 ORTHO05D003044 4.1e-12 74.7 88 52.3
BcaB05g22944 Brassica carinata HOM05D002776 ORTHO05D000395 5.4e-12 74.3 88 52.3
BcaB04g17428 Brassica carinata HOM05D002776 ORTHO05D091936 7.0e-12 73.9 57 56.1
A08p06070 Brassica napus HOM05D002776 ORTHO05D011320 7.0e-12 73.9 83 50.6
BcaC09g48965 Brassica carinata HOM05D002776 ORTHO05D003044 2.7e-11 72.0 88 52.3
BcaC04g22429 Brassica carinata HOM05D002776 ORTHO05D011320 7.8e-11 70.5 88 51.1
BcaB06g27856 Brassica carinata HOM05D002776 ORTHO05D003044 1.7e-10 69.3 41 78.0
BcaC02g10286 Brassica carinata HOM05D002776 ORTHO05D011320 1.1e-09 66.6 88 47.7
BcaC08g44371 Brassica carinata HOM05D002776 ORTHO05D003044 2.5e-09 65.5 53 64.2
BcaC02g09112 Brassica carinata HOM05D002776 ORTHO05D011320 1.2e-08 63.2 41 73.2
C01p34330 Brassica napus HOM05D001224 ORTHO05D023838 2.8e-08 62.0 67 44.8
BolC1t03403H Brassica oleracea HOM05D001224 ORTHO05D023838 2.8e-08 62.0 67 44.8
BcaC09g50108 Brassica carinata HOM05D002776 ORTHO05D011320 4.7e-08 61.2 33 87.9
BcaC05g25875 Brassica carinata HOM05D002776 ORTHO05D011320 1.0e-07 60.1 49 65.3


User provided reference genes

Program Settings