Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g27021 Brassica carinata HOM05D001872 ORTHO05D001859 4.0e-30 134.0 64 100.0
AL7G45240 Arabidopsis lyrata HOM05D001872 ORTHO05D001859 6.6e-09 63.5 36 83.3
EL10Ac2g03463 Beta vulgaris HOM05D001872 ORTHO05D001859 5.6e-08 60.5 38 76.3
AUR62022530 Chenopodium quinoa HOM05D001872 ORTHO05D001859 7.3e-08 60.1 38 73.7
TAR636G1680 Trochodendron aralioides HOM05D001872 ORTHO05D001859 7.3e-08 60.1 38 73.7
C04p43650 Brassica napus HOM05D001872 ORTHO05D001859 1.2e-07 59.3 35 82.9
BolC4t25946H Brassica oleracea HOM05D001872 ORTHO05D001859 1.2e-07 59.3 35 82.9
Peaxi162Scf00015g02219 Petunia axillaris HOM05D001872 ORTHO05D001859 1.2e-07 59.3 36 77.8
Hund19998 Selenicereus undatus HOM05D001872 ORTHO05D001859 1.2e-07 59.3 38 73.7
Aa31LG4G5510 Aethionema arabicum HOM05D001872 ORTHO05D001859 1.6e-07 58.9 36 75.0
Ah.16g107630 Amaranthus hybridus HOM05D001872 ORTHO05D001859 1.6e-07 58.9 38 76.3
Dinv31405 Davidia involucrata HOM05D001872 ORTHO05D001859 1.6e-07 58.9 38 71.1
vmacro07140 Vaccinium macrocarpon HOM05D001872 ORTHO05D001859 1.6e-07 58.9 36 77.8
BcaB05g24899 Brassica carinata HOM05D001872 ORTHO05D001859 2.1e-07 58.5 33 81.8
CSS0046087 Camellia sinensis var. sinensis HOM05D001872 ORTHO05D001859 2.1e-07 58.5 36 72.2
COL.COLO4_10917 Corchorus olitorius HOM05D001872 ORTHO05D001859 2.1e-07 58.5 38 68.4
BcaB03g12910 Brassica carinata HOM05D001872 ORTHO05D001859 2.8e-07 58.2 36 77.8
BcaB07g31978 Brassica carinata HOM05D001872 ORTHO05D001859 2.8e-07 58.2 36 77.8
A08p29770 Brassica napus HOM05D001872 ORTHO05D001859 2.8e-07 58.2 36 77.8
C08p19510 Brassica napus HOM05D001872 ORTHO05D001859 2.8e-07 58.2 36 77.8
BolC8t49574H Brassica oleracea HOM05D001872 ORTHO05D001859 2.8e-07 58.2 36 77.8
CAN.G1339.4 Capsicum annuum HOM05D001872 ORTHO05D001859 2.8e-07 58.2 36 75.0
Nn2g10511 Nelumbo nucifera HOM05D001872 ORTHO05D001859 2.8e-07 58.2 38 73.7
PSO339G0199 Papaver somniferum HOM05D001872 ORTHO05D001859 2.8e-07 58.2 38 68.4
PSO339G4693 Papaver somniferum HOM05D001872 ORTHO05D001859 2.8e-07 58.2 38 73.7
PSO384G3366 Papaver somniferum HOM05D001872 ORTHO05D001859 2.8e-07 58.2 38 68.4
TWI15G1031 Tripterygium wilfordii HOM05D001872 ORTHO05D001859 2.8e-07 58.2 35 77.1
TWI38G2404 Tripterygium wilfordii HOM05D001872 ORTHO05D001859 2.8e-07 58.2 36 72.2
Os05g0116100 Oryza sativa ssp. japonica HOM05D001872 ORTHO05D001859 3.6e-07 57.8 38 71.1
THA.LOC104827305 Tarenaya hassleriana HOM05D001872 ORTHO05D001859 3.6e-07 57.8 36 77.8
CARHR020120 Cardamine hirsuta HOM05D001872 ORTHO05D001859 4.7e-07 57.4 36 75.0
Ciclev10032931m.g Citrus clementina HOM05D001872 ORTHO05D001859 4.7e-07 57.4 36 72.2
Gohir.D10G219500 Gossypium hirsutum HOM05D001872 ORTHO05D001859 4.7e-07 57.4 36 69.4
Gorai.011G246200 Gossypium raimondii HOM05D001872 ORTHO05D001859 4.7e-07 57.4 36 69.4
Nn2g12864 Nelumbo nucifera HOM05D001872 ORTHO05D001859 4.7e-07 57.4 38 71.1
AL2G35200 Arabidopsis lyrata HOM05D001872 ORTHO05D001859 6.2e-07 57.0 36 72.2
AT1G75270 Arabidopsis thaliana HOM05D001872 ORTHO05D001859 6.2e-07 57.0 36 72.2
BcaC03g15558 Brassica carinata HOM05D001872 ORTHO05D001859 6.2e-07 57.0 33 78.8
A02p19840 Brassica napus HOM05D001872 ORTHO05D001859 6.2e-07 57.0 33 78.8
BraA02t07017Z Brassica rapa HOM05D001872 ORTHO05D001859 6.2e-07 57.0 33 78.8
CANSAT25G2271 Cannabis sativa HOM05D001872 ORTHO05D001859 6.2e-07 57.0 38 73.7
Haze_16990 Corylus avellana HOM05D001872 ORTHO05D001859 6.2e-07 57.0 36 72.2
Thhalv10019864m.g Eutrema salsugineum HOM05D001872 ORTHO05D001859 6.2e-07 57.0 36 72.2
HanXRQChr12g0371001 Helianthus annuus HOM05D001872 ORTHO05D001859 6.2e-07 57.0 35 74.3
Hma1.2p1_0402F.1_g145080 Hydrangea macrophylla HOM05D001872 ORTHO05D001859 6.2e-07 57.0 38 73.7
Oeu050657.1 Olea europaea HOM05D001872 ORTHO05D001859 6.2e-07 57.0 36 69.4
Sp1g17420 Schrenkiella parvula HOM05D001872 ORTHO05D001859 6.2e-07 57.0 36 75.0
Sp5g30440 Schrenkiella parvula HOM05D001872 ORTHO05D001859 6.2e-07 57.0 36 72.2
A06p15730 Brassica napus HOM05D001872 ORTHO05D001859 8.1e-07 56.6 36 75.0
C05p18050 Brassica napus HOM05D001872 ORTHO05D001859 8.1e-07 56.6 36 75.0
BolC5t30513H Brassica oleracea HOM05D001872 ORTHO05D001859 8.1e-07 56.6 36 75.0
BraA06t24683Z Brassica rapa HOM05D001872 ORTHO05D001859 8.1e-07 56.6 36 75.0
Eucgr.G02764 Eucalyptus grandis HOM05D001872 ORTHO05D001859 8.1e-07 56.6 36 66.7
PSO384G1978 Papaver somniferum HOM05D001872 ORTHO05D001859 8.1e-07 56.6 38 71.1
PGR142G2200 Punica granatum HOM05D001872 ORTHO05D001859 8.1e-07 56.6 36 72.2
Solyc05g054760.4 Solanum lycopersicum HOM05D001872 ORTHO05D001859 8.1e-07 56.6 36 77.8
Thecc.10G058100 Theobroma cacao HOM05D001872 ORTHO05D001859 8.1e-07 56.6 36 69.4
Aa31LG7G4190 Aethionema arabicum HOM05D001872 ORTHO05D001859 1.1e-06 56.2 41 65.9
MSTRG.8236 Avicennia marina HOM05D001872 ORTHO05D001859 1.1e-06 56.2 38 68.4
Sed0018854 Sechium edule HOM05D001872 ORTHO05D001859 1.1e-06 56.2 36 75.0
Sc07g0006690 Simmondsia chinensis HOM05D001872 ORTHO05D001859 1.1e-06 56.2 56 50.0
PGSC0003DMG400023416 Solanum tuberosum HOM05D001872 ORTHO05D001859 1.1e-06 56.2 35 77.1
ATR0033G034 Amborella trichopoda HOM05D001872 ORTHO05D001859 1.4e-06 55.8 33 75.8
BcaB03g14439 Brassica carinata HOM05D001872 ORTHO05D001859 1.4e-06 55.8 36 75.0
DCAR_027680 Daucus carota HOM05D001872 ORTHO05D001859 1.4e-06 55.8 36 72.2
Thhalv10008761m.g Eutrema salsugineum HOM05D001872 ORTHO05D001859 1.4e-06 55.8 36 75.0
Nitab4.5_0004055g0020 Nicotiana tabacum HOM05D001872 ORTHO05D001859 1.4e-06 55.8 36 72.2
Zm00001eb266260 Zea mays HOM05D001872 ORTHO05D001859 1.4e-06 55.8 35 71.4
C02p32460 Brassica napus HOM05D001872 ORTHO05D001859 1.8e-06 55.5 33 75.8
Carub.0002s2209 Capsella rubella HOM05D001872 ORTHO05D001859 1.8e-06 55.5 36 69.4
Duzib128G0283 Durio zibethinus HOM05D001872 ORTHO05D001859 1.8e-06 55.5 36 69.4
Manes.10G037200 Manihot esculenta HOM05D001872 ORTHO05D001859 1.8e-06 55.5 35 74.3
Oeu011131.4 Olea europaea HOM05D001872 ORTHO05D001859 1.8e-06 55.5 33 72.7
GSVIVG01005966001 Vitis vinifera HOM05D001872 ORTHO05D001859 1.8e-06 55.5 36 69.4
Zm00001eb355540 Zea mays HOM05D001872 ORTHO05D001859 1.8e-06 55.5 35 71.4
Zm00001eb355550 Zea mays HOM05D001872 ORTHO05D001859 1.8e-06 55.5 33 78.8
CiPaw.01G281700 Carya illinoinensis HOM05D001872 ORTHO05D001859 2.3e-06 55.1 36 69.4
Duzib106G0266 Durio zibethinus HOM05D001872 ORTHO05D001859 2.3e-06 55.1 35 71.4
Lj1A931T51 Lonicera japonica HOM05D001872 ORTHO05D001859 2.3e-06 55.1 33 75.8
Sc07g0006680 Simmondsia chinensis HOM05D001872 ORTHO05D001859 2.3e-06 55.1 38 65.8
Sopen05g033230 Solanum pennellii HOM05D001872 ORTHO05D001859 2.3e-06 55.1 32 81.2
CSS0023136 Camellia sinensis var. sinensis HOM05D001872 ORTHO05D001859 3.1e-06 54.7 36 72.2
HanXRQChr08g0220001 Helianthus annuus HOM05D001872 ORTHO05D001859 3.1e-06 54.7 35 71.4
VMungo0720G0479 Vigna mungo HOM05D001872 ORTHO05D001859 3.1e-06 54.7 36 72.2
CARHR068610 Cardamine hirsuta HOM05D001872 ORTHO05D001859 4.0e-06 54.3 36 69.4
Migut.F01517 Erythranthe guttata HOM05D001872 ORTHO05D001859 4.0e-06 54.3 35 68.6
Sabra08G0035400 Salix brachista HOM05D001872 ORTHO05D001859 4.0e-06 54.3 36 63.9
unitig_749.g14013 Utricularia gibba HOM05D000269 ORTHO05D005780 4.0e-06 54.3 38 65.8
Actinidia29207 Actinidia chinensis HOM05D001872 ORTHO05D001859 5.2e-06 53.9 36 69.4
Cpa.g.c48029 Carica papaya HOM05D001872 ORTHO05D001859 5.2e-06 53.9 36 69.4
Cpa.g.sc1.329 Carica papaya HOM05D001872 ORTHO05D001859 5.2e-06 53.9 36 69.4
Glyma.10G291100 Glycine max HOM05D001872 ORTHO05D001859 5.2e-06 53.9 36 72.2
Glyma.20G240300 Glycine max HOM05D001872 ORTHO05D001859 5.2e-06 53.9 36 72.2
Gohir.A10G211200 Gossypium hirsutum HOM05D001872 ORTHO05D001859 5.2e-06 53.9 36 66.7
Lsat_1_v5_gn_8_18380 Lactuca sativa HOM05D001872 ORTHO05D001859 5.2e-06 53.9 35 71.4
TAR369G0004 Trochodendron aralioides HOM05D001872 ORTHO05D001859 5.2e-06 53.9 38 65.8
ECA233G1507 Erigeron canadensis HOM05D001872 ORTHO05D001859 6.8e-06 53.5 35 71.4
Gohir.A05G351200 Gossypium hirsutum HOM05D001872 ORTHO05D001859 6.8e-06 53.5 35 71.4
Gohir.D04G061500 Gossypium hirsutum HOM05D001872 ORTHO05D001859 6.8e-06 53.5 35 71.4
Gorai.012G068600 Gossypium raimondii HOM05D001872 ORTHO05D001859 6.8e-06 53.5 35 71.4
SalBow6G6064 Salvia bowleyana HOM05D001872 ORTHO05D001859 6.8e-06 53.5 35 65.7
HPP92_015405 Vanilla planifolia HOM05D001872 ORTHO05D001859 6.8e-06 53.5 34 67.6
Aqoxy4G03053 Aquilegia oxysepala HOM05D001872 ORTHO05D001859 8.9e-06 53.1 36 66.7
Phvul.007G009800 Phaseolus vulgaris HOM05D001872 ORTHO05D001859 8.9e-06 53.1 36 72.2
Potri.008G049300 Populus trichocarpa HOM05D001872 ORTHO05D001859 8.9e-06 53.1 36 63.9
Prupe.2G227100 Prunus persica HOM05D001872 ORTHO05D001859 8.9e-06 53.1 36 69.4


User provided reference genes

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