Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g26987 Brassica carinata HOM05D007954 ORTHO05D010124 1.4e-93 346.3 170 100.0
BcaB05g24528 Brassica carinata HOM05D007954 ORTHO05D010124 1.5e-92 342.8 168 99.4
BcaB05g24523 Brassica carinata HOM05D007954 ORTHO05D010124 5.5e-79 297.7 167 89.2
BcaB05g24522 Brassica carinata HOM05D007954 ORTHO05D010124 3.3e-76 288.5 159 90.6
A02p16350 Brassica napus HOM05D007954 ORTHO05D010124 1.1e-74 283.5 168 86.9
BraA02t06693Z Brassica rapa HOM05D007954 ORTHO05D010124 1.1e-74 283.5 168 86.9
BcaC03g15156 Brassica carinata HOM05D007954 ORTHO05D010124 7.0e-74 280.8 168 86.3
BolC2t08789H Brassica oleracea HOM05D007954 ORTHO05D010124 7.0e-74 280.8 168 86.3
AL2G29370 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 2.0e-57 226.1 164 70.1
AT1G70040 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 4.0e-53 211.8 149 68.5
Carub.0002s1680 Capsella rubella HOM05D007954 ORTHO05D010124 5.2e-53 211.5 151 70.2
BraA07t31216Z Brassica rapa HOM05D007954 ORTHO05D010124 5.7e-52 208.0 149 67.8
AT1G70120 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 3.2e-50 202.2 158 64.6
BcaC08g46452 Brassica carinata HOM05D007954 ORTHO05D010124 5.4e-50 201.4 149 65.8
C02p27290 Brassica napus HOM05D007954 ORTHO05D010124 9.2e-50 200.7 168 67.3
CARHR063130 Cardamine hirsuta HOM05D007954 ORTHO05D010124 2.7e-49 199.1 152 64.5
A07p36460 Brassica napus HOM05D007954 ORTHO05D010124 3.5e-49 198.7 167 58.7
BraA07t31217Z Brassica rapa HOM05D007954 ORTHO05D010124 3.5e-49 198.7 167 58.7
BcaC08g46453 Brassica carinata HOM05D007954 ORTHO05D010124 4.6e-49 198.4 167 59.9
BolC6t39464H Brassica oleracea HOM05D007954 ORTHO05D010124 4.6e-49 198.4 167 59.9
AL2G29310 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 5.9e-49 198.0 157 63.1
BolC6t39462H Brassica oleracea HOM05D007954 ORTHO05D010124 6.6e-48 194.5 149 63.1
C06p43910 Brassica napus HOM05D007954 ORTHO05D010124 8.6e-48 194.1 149 63.8
BcaB03g14782 Brassica carinata HOM05D007954 ORTHO05D010124 1.5e-47 193.4 149 63.1
C06p43900 Brassica napus HOM05D007954 ORTHO05D010124 1.9e-47 193.0 149 63.8
C06p44270 Brassica napus HOM05D007954 ORTHO05D010124 3.3e-47 192.2 149 63.1
BcaC08g46451 Brassica carinata HOM05D007954 ORTHO05D010124 5.8e-44 181.4 141 61.7
AL5G35460 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 4.1e-42 175.3 141 61.7
Carub.0002s1672 Capsella rubella HOM05D007954 ORTHO05D010124 5.4e-42 174.9 153 57.5
AL2G29280 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 8.6e-40 167.5 122 63.9
A07p36600 Brassica napus HOM05D007954 ORTHO05D010124 3.3e-39 165.6 151 58.9
AT3G60700 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 9.5e-39 164.1 145 54.5
BraA07t31245Z Brassica rapa HOM05D007954 ORTHO05D010124 1.3e-35 153.7 165 49.1
AT5G39330 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 1.7e-35 153.3 149 53.0
BcaB03g14800 Brassica carinata HOM05D007954 ORTHO05D010124 3.7e-35 152.1 149 53.7
Carub.0002s1679 Capsella rubella HOM05D007954 ORTHO05D010124 1.1e-34 150.6 132 60.6
CARHR063140 Cardamine hirsuta HOM05D007954 ORTHO05D010124 2.4e-34 149.4 140 55.0
AL7G51140 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 4.6e-33 145.2 149 51.7
BraA06t27739Z Brassica rapa HOM05D007954 ORTHO05D010124 4.6e-33 145.2 168 46.4
AT1G70020 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 2.3e-32 142.9 151 51.0
BcaNung01944 Brassica carinata HOM05D007954 ORTHO05D010124 2.3e-32 142.9 168 46.4
C07p63390 Brassica napus HOM05D007954 ORTHO05D010124 2.3e-32 142.9 168 46.4
BcaNung01945 Brassica carinata HOM05D007954 ORTHO05D010124 6.6e-32 141.4 157 49.0
Thhalv10019156m.g Eutrema salsugineum HOM05D007954 ORTHO05D010124 1.9e-31 139.8 149 49.7
BcaB05g22706 Brassica carinata HOM05D001308 ORTHO05D010124 5.6e-31 138.3 141 49.6
BcaC08g46483 Brassica carinata HOM05D007954 ORTHO05D010124 5.6e-31 138.3 110 60.9
AL2G29250 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 7.3e-31 137.9 151 49.0
C01p17490 Brassica napus HOM05D007954 ORTHO05D010124 1.6e-30 136.7 161 48.4
BcaC09g51050 Brassica carinata HOM05D007954 ORTHO05D010124 3.6e-30 135.6 161 48.4
BolC1t01689H Brassica oleracea HOM05D007954 ORTHO05D010124 3.6e-30 135.6 161 48.4
C06p43920 Brassica napus HOM05D007954 ORTHO05D010124 6.2e-30 134.8 110 59.1
BraA01t01369Z Brassica rapa HOM05D007954 ORTHO05D010124 1.4e-29 133.7 161 47.8
CARHR063150 Cardamine hirsuta HOM05D007954 ORTHO05D010124 5.2e-29 131.7 118 58.5
A01p14220 Brassica napus HOM05D007954 ORTHO05D010124 1.2e-28 130.6 161 47.2
CARHR215600 Cardamine hirsuta HOM05D007954 ORTHO05D010124 1.5e-28 130.2 132 50.0
A07p36450 Brassica napus HOM05D007954 ORTHO05D010124 2.0e-28 129.8 97 64.9
Carub.0007s0174 Capsella rubella HOM05D007954 ORTHO05D010124 4.4e-28 128.6 143 47.6
BcaB03g14778 Brassica carinata HOM05D007954 ORTHO05D010124 4.9e-27 125.2 149 49.7
BcaC08g46450 Brassica carinata HOM05D007954 ORTHO05D010124 4.9e-27 125.2 142 47.2
BolC6t39460H Brassica oleracea HOM05D007954 ORTHO05D010124 4.9e-27 125.2 142 47.2
Carub.0007s3660 Capsella rubella HOM05D007954 ORTHO05D010124 4.9e-27 125.2 141 46.8
CARHR263080 Cardamine hirsuta HOM05D007954 ORTHO05D010124 2.7e-25 119.4 141 48.2
Thhalv10019602m.g Eutrema salsugineum HOM05D007954 ORTHO05D010124 8.6e-24 114.4 85 67.1
BcaB03g15527 Brassica carinata HOM05D007954 ORTHO05D010124 5.6e-23 111.7 146 39.7
BraA07t31226Z Brassica rapa HOM05D007954 ORTHO05D010124 9.6e-23 110.9 103 59.2
A06p48730 Brassica napus HOM05D007954 ORTHO05D010124 8.1e-22 107.8 157 40.1
THA.LOC104822072 Tarenaya hassleriana HOM05D007954 ORTHO05D010124 6.9e-21 104.8 166 36.1
AL2G29390 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 8.9e-21 104.4 63 76.2
BcaNung01946 Brassica carinata HOM05D007954 ORTHO05D010124 7.6e-20 101.3 106 51.9
C06p43870 Brassica napus HOM05D007954 ORTHO05D010124 2.9e-19 99.4 111 45.0
AT3G54410 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 1.9e-15 86.7 83 53.0
AL2G29260 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 5.3e-13 78.6 85 47.1
BcaB03g15524 Brassica carinata HOM05D007954 ORTHO05D010124 5.3e-13 78.6 109 39.4
C06p44000 Brassica napus HOM05D007954 ORTHO05D102319 9.0e-13 77.8 79 54.4
BcaB03g14781 Brassica carinata HOM05D000629 ORTHO05D000576 5.8e-12 75.1 69 56.5
BcaB03g15526 Brassica carinata HOM05D007954 ORTHO05D010124 2.7e-09 66.2 58 50.0
AL7G12050 Arabidopsis lyrata HOM05D007954 ORTHO05D080602 6.0e-09 65.1 55 58.2
CARHR263070 Cardamine hirsuta HOM05D007954 ORTHO05D010124 4.3e-07 58.9 54 48.1
A07p36780 Brassica napus HOM05D007954 ORTHO05D010124 9.6e-07 57.8 53 56.6


User provided reference genes

Program Settings