Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g26983 Brassica carinata HOM05D005627 ORTHO05D039808 2.1e-149 532.3 262 100.0
BraA08t34504Z Brassica rapa HOM05D006289 ORTHO05D039808 1.2e-59 234.2 206 57.3
BcaB04g17888 Brassica carinata HOM05D005627 ORTHO05D017568 1.1e-33 147.9 211 39.3
BcaB04g18536 Brassica carinata HOM05D005627 ORTHO05D009842 3.2e-33 146.4 203 43.3
C05p28910 Brassica napus HOM05D005627 ORTHO05D031886 9.2e-33 144.8 279 35.1
BolC5t31612H Brassica oleracea HOM05D005627 ORTHO05D031886 9.2e-33 144.8 279 35.1
BcaC05g27033 Brassica carinata HOM05D005627 ORTHO05D031886 4.6e-32 142.5 277 35.0
BcaB03g12380 Brassica carinata HOM05D006289 ORTHO05D092672 7.8e-32 141.7 106 74.5
BcaB05g23251 Brassica carinata HOM05D005627 ORTHO05D009842 1.3e-31 141.0 246 36.2
C05p37190 Brassica napus HOM05D005627 ORTHO05D024275 5.1e-31 139.0 280 35.7
BraA05t20012Z Brassica rapa HOM05D005627 ORTHO05D021730 3.3e-30 136.3 221 35.7
BcaB08g34566 Brassica carinata HOM05D005627 ORTHO05D009842 7.3e-30 135.2 272 34.6
BolC9t56847H Brassica oleracea HOM05D005627 ORTHO05D021730 2.1e-29 133.7 270 34.8
BcaB01g00118 Brassica carinata HOM05D005627 ORTHO05D009842 6.2e-29 132.1 251 35.5
A09p28380 Brassica napus HOM05D005627 ORTHO05D021730 6.2e-29 132.1 231 35.1
C09p39670 Brassica napus HOM05D005627 ORTHO05D021730 3.1e-28 129.8 290 33.1
BcaC04g21092 Brassica carinata HOM05D005627 ORTHO05D031749 8.9e-28 128.3 101 58.4
C09p35790 Brassica napus HOM05D005627 ORTHO05D031749 8.9e-28 128.3 101 58.4
BolC9t56413H Brassica oleracea HOM05D005627 ORTHO05D031749 8.9e-28 128.3 101 58.4
BcaB03g16259 Brassica carinata HOM05D005627 ORTHO05D021730 2.0e-27 127.1 279 33.3
BcaC01g03482 Brassica carinata HOM05D006289 ORTHO05D032299 2.6e-27 126.7 248 33.5
BraA02t08906Z Brassica rapa HOM05D005627 ORTHO05D019933 9.9e-27 124.8 106 54.7
BcaB01g00831 Brassica carinata HOM05D005627 ORTHO05D009842 1.7e-26 124.0 252 33.3
BcaC08g47004 Brassica carinata HOM05D005627 ORTHO05D019933 1.7e-26 124.0 205 35.1
BcaC09g49023 Brassica carinata HOM05D006289 ORTHO05D018698 2.9e-26 123.2 210 38.1
BcaC04g19885 Brassica carinata HOM05D005627 ORTHO05D017564 3.7e-26 122.9 203 37.4
BcaC05g27035 Brassica carinata HOM05D006289 ORTHO05D032057 8.3e-26 121.7 260 32.7
C05p28920 Brassica napus HOM05D006289 ORTHO05D032057 8.3e-26 121.7 260 32.7
BolC5t31614H Brassica oleracea HOM05D006289 ORTHO05D032057 8.3e-26 121.7 260 32.7
BcaB08g34781 Brassica carinata HOM05D005627 ORTHO05D009842 1.4e-25 120.9 252 33.7
BcaB07g30175 Brassica carinata HOM05D005627 ORTHO05D019933 2.4e-25 120.2 206 35.9
BcaB04g19628 Brassica carinata HOM05D005627 ORTHO05D017564 4.1e-25 119.4 254 29.5
A04p11360 Brassica napus HOM05D005627 ORTHO05D019933 5.4e-25 119.0 106 51.9
BraA04t16798Z Brassica rapa HOM05D005627 ORTHO05D019933 5.4e-25 119.0 106 51.9
BcaB03g16579 Brassica carinata HOM05D006289 ORTHO05D019933 7.1e-25 118.6 210 34.3
BcaB01g01914 Brassica carinata HOM05D005627 ORTHO05D009842 2.1e-24 117.1 216 37.0
BraA01t02126Z Brassica rapa HOM05D005627 ORTHO05D021730 3.5e-24 116.3 124 47.6
BcaC04g20743 Brassica carinata HOM05D006289 ORTHO05D027118 1.3e-23 114.4 101 50.5
C03p52020 Brassica napus HOM05D006289 ORTHO05D032299 1.3e-23 114.4 234 32.5
BolC3t17484H Brassica oleracea HOM05D006289 ORTHO05D032299 1.3e-23 114.4 234 32.5
C09p39660 Brassica napus HOM05D006289 ORTHO05D027118 8.6e-23 111.7 104 50.0
BolC9t56845H Brassica oleracea HOM05D006289 ORTHO05D027118 8.6e-23 111.7 104 50.0
A09p28360 Brassica napus HOM05D006289 ORTHO05D027118 2.5e-22 110.2 98 50.0
BolC2t10570H Brassica oleracea HOM05D006289 ORTHO05D040995 2.1e-21 107.1 247 30.8
C03p66840 Brassica napus HOM05D006289 ORTHO05D017568 4.7e-21 105.9 248 30.2
BcaC08g46979 Brassica carinata HOM05D005627 ORTHO05D019933 8.1e-21 105.1 106 46.2
BolC9t58083H Brassica oleracea HOM05D006289 ORTHO05D018698 1.1e-20 104.8 103 50.5
BolC3t18952H Brassica oleracea HOM05D006289 ORTHO05D017568 3.1e-20 103.2 109 45.0
BraA05t20010Z Brassica rapa HOM05D006289 ORTHO05D028190 3.1e-20 103.2 100 47.0
C01p43410 Brassica napus HOM05D006289 ORTHO05D017568 6.8e-20 102.1 109 45.0
BcaC03g16702 Brassica carinata HOM05D006289 ORTHO05D039115 9.9e-19 98.2 94 48.9
BcaB04g19296 Brassica carinata HOM05D006289 ORTHO05D017564 1.3e-18 97.8 151 35.8
A01p24510 Brassica napus HOM05D006289 ORTHO05D016037 1.7e-18 97.4 285 28.8
C02p45490 Brassica napus HOM05D006289 ORTHO05D039115 1.1e-17 94.7 109 44.0
BcaC04g19240 Brassica carinata HOM05D006289 ORTHO05D017568 1.9e-17 94.0 94 45.7
BolC9t59378H Brassica oleracea HOM05D006289 ORTHO05D017568 1.9e-17 94.0 93 46.2
BraA04t16495Z Brassica rapa HOM05D006289 ORTHO05D016037 3.2e-17 93.2 282 28.7
C08p09320 Brassica napus HOM05D006289 ORTHO05D017568 7.1e-17 92.0 81 51.9
C09p12390 Brassica napus HOM05D005627 ORTHO05D032198 7.1e-17 92.0 94 47.9
C01p11540 Brassica napus HOM05D005627 ORTHO05D009842 1.1e-14 84.7 92 44.6
C09p42080 Brassica napus HOM05D006289 ORTHO05D016037 7.3e-14 82.0 269 27.1
BcaB01g01204 Brassica carinata HOM05D006289 ORTHO05D019882 1.3e-13 81.3 90 41.1
BcaB04g18139 Brassica carinata HOM05D006289 ORTHO05D009842 1.6e-13 80.9 91 44.0
C06p38200 Brassica napus HOM05D005627 ORTHO05D011976 1.6e-13 80.9 102 46.1
BolC6t38918H Brassica oleracea HOM05D005627 ORTHO05D011976 1.6e-13 80.9 96 45.8
BcaB02g10844 Brassica carinata HOM05D006289 ORTHO05D016037 2.1e-13 80.5 90 43.3
BcaB06g28130 Brassica carinata HOM05D006289 ORTHO05D016037 4.8e-13 79.3 82 45.1
BcaC06g35917 Brassica carinata HOM05D005627 ORTHO05D011976 4.8e-13 79.3 102 44.1
A08p09530 Brassica napus HOM05D006289 ORTHO05D019882 4.8e-13 79.3 237 27.8
BolC7t41413H Brassica oleracea HOM05D005627 ORTHO05D011976 4.8e-13 79.3 102 44.1
BolC8t48148H Brassica oleracea HOM05D006289 ORTHO05D033772 4.8e-13 79.3 91 41.8
A01p23190 Brassica napus HOM05D006289 ORTHO05D033772 6.2e-13 79.0 91 41.8
BraA01t02228Z Brassica rapa HOM05D006289 ORTHO05D033772 6.2e-13 79.0 91 41.8
BraA02t06823Z Brassica rapa HOM05D005627 ORTHO05D011792 6.2e-13 79.0 93 44.1
BcaB03g14785 Brassica carinata HOM05D006289 ORTHO05D009842 8.1e-13 78.6 93 40.9
BcaNung05731 Brassica carinata HOM05D005627 ORTHO05D011976 8.1e-13 78.6 102 44.1
A09p34760 Brassica napus HOM05D006289 ORTHO05D009842 8.1e-13 78.6 91 41.8
A05p13630 Brassica napus HOM05D006289 ORTHO05D027692 1.1e-12 78.2 265 25.7
C03p74240 Brassica napus HOM05D006289 ORTHO05D028190 1.1e-12 78.2 74 47.3
BolC3t19682H Brassica oleracea HOM05D006289 ORTHO05D028190 1.1e-12 78.2 74 47.3
BraA05t20302Z Brassica rapa HOM05D006289 ORTHO05D027692 1.1e-12 78.2 265 25.7
A04p16270 Brassica napus HOM05D006289 ORTHO05D019882 1.8e-12 77.4 248 27.4
BraA06t25319Z Brassica rapa HOM05D005627 ORTHO05D011976 1.8e-12 77.4 102 45.1
BcaC08g46023 Brassica carinata HOM05D005627 ORTHO05D011976 2.4e-12 77.0 95 44.2
A06p22330 Brassica napus HOM05D005627 ORTHO05D011976 3.1e-12 76.6 101 44.6
A07p02750 Brassica napus HOM05D006289 ORTHO05D009842 3.1e-12 76.6 91 39.6
BcaC03g17142 Brassica carinata HOM05D005627 ORTHO05D011976 4.0e-12 76.3 102 42.2
A02p27270 Brassica napus HOM05D006289 ORTHO05D040814 4.0e-12 76.3 125 35.2
A05p27900 Brassica napus HOM05D006289 ORTHO05D009842 4.0e-12 76.3 91 40.7
C07p12180 Brassica napus HOM05D005627 ORTHO05D011976 4.0e-12 76.3 102 44.1
BolC2t11140H Brassica oleracea HOM05D005627 ORTHO05D011976 4.0e-12 76.3 102 42.2
BolC7t41685H Brassica oleracea HOM05D005627 ORTHO05D011976 4.0e-12 76.3 102 44.1
BolC7t42041H Brassica oleracea HOM05D006289 ORTHO05D016037 4.0e-12 76.3 90 40.0
BraA02t07752Z Brassica rapa HOM05D006289 ORTHO05D040814 4.0e-12 76.3 125 35.2
BcaNung00230 Brassica carinata HOM05D006289 ORTHO05D027553 6.9e-12 75.5 90 44.4
C01p21290 Brassica napus HOM05D006289 ORTHO05D009842 6.9e-12 75.5 91 40.7
C07p12150 Brassica napus HOM05D005627 ORTHO05D011976 6.9e-12 75.5 102 42.2
BolC7t41682H Brassica oleracea HOM05D005627 ORTHO05D011976 6.9e-12 75.5 102 42.2
BraA03t09393Z Brassica rapa HOM05D006289 ORTHO05D016037 6.9e-12 75.5 90 41.1
BraA04t17266Z Brassica rapa HOM05D006289 ORTHO05D019882 6.9e-12 75.5 88 42.0
BraA09t41982Z Brassica rapa HOM05D005627 ORTHO05D011792 6.9e-12 75.5 93 41.9
A02p12540 Brassica napus HOM05D006289 ORTHO05D009842 9.0e-12 75.1 137 32.8
BraA10t43450Z Brassica rapa HOM05D006289 ORTHO05D009842 9.0e-12 75.1 137 32.8
BolC7t41167H Brassica oleracea HOM05D005627 ORTHO05D011792 1.5e-11 74.3 92 40.2
BraA08t32951Z Brassica rapa HOM05D006289 ORTHO05D019882 1.5e-11 74.3 86 41.9
BcaC06g35675 Brassica carinata HOM05D005627 ORTHO05D011976 2.0e-11 73.9 102 43.1
BraA05t21307Z Brassica rapa HOM05D006289 ORTHO05D009842 2.0e-11 73.9 140 32.1
BcaC06g36127 Brassica carinata HOM05D013280 ORTHO05D011792 2.6e-11 73.6 129 32.6
C02p24040 Brassica napus HOM05D006289 ORTHO05D009842 2.6e-11 73.6 91 39.6
BraA06t25337Z Brassica rapa HOM05D006289 ORTHO05D009842 2.6e-11 73.6 91 38.5
BraA07t28814Z Brassica rapa HOM05D006289 ORTHO05D009842 2.6e-11 73.6 92 40.2
BcaC02g11662 Brassica carinata HOM05D005627 ORTHO05D011792 3.4e-11 73.2 93 39.8
C04p12610 Brassica napus HOM05D005627 ORTHO05D011792 3.4e-11 73.2 93 39.8
C07p09750 Brassica napus HOM05D005627 ORTHO05D011976 3.4e-11 73.2 102 42.2
C07p21860 Brassica napus HOM05D006289 ORTHO05D009842 3.4e-11 73.2 137 30.7
BolC4t22910H Brassica oleracea HOM05D005627 ORTHO05D011792 3.4e-11 73.2 93 39.8
A05p28230 Brassica napus HOM05D006289 ORTHO05D009842 4.4e-11 72.8 139 31.7
BraA05t21704Z Brassica rapa HOM05D006289 ORTHO05D009842 4.4e-11 72.8 139 31.7
BcaB02g10994 Brassica carinata HOM05D005627 ORTHO05D011976 5.8e-11 72.4 99 39.4
BcaB01g01600 Brassica carinata HOM05D009418 ORTHO05D092871 1.3e-10 71.2 146 37.0
C07p07500 Brassica napus HOM05D013280 ORTHO05D011792 1.3e-10 71.2 93 37.6
C07p15540 Brassica napus HOM05D006289 ORTHO05D016037 3.8e-10 69.7 90 40.0
C02p52110 Brassica napus HOM05D005627 ORTHO05D040212 4.9e-10 69.3 58 55.2
BolC2t11295H Brassica oleracea HOM05D005627 ORTHO05D040212 4.9e-10 69.3 58 55.2
BolC4t26246H Brassica oleracea HOM05D008838 ORTHO05D017574 4.9e-10 69.3 148 31.8
BolC7t41624H Brassica oleracea HOM05D006289 ORTHO05D027553 4.9e-10 69.3 268 26.5
A05p27890 Brassica napus HOM05D005627 ORTHO05D028293 6.4e-10 68.9 93 39.8
A10p08780 Brassica napus HOM05D009418 ORTHO05D018626 1.1e-09 68.2 108 38.0
C08p22740 Brassica napus HOM05D009418 ORTHO05D018626 1.1e-09 68.2 108 38.9
BolC8t49910H Brassica oleracea HOM05D009418 ORTHO05D018626 1.1e-09 68.2 108 38.9
BraSC37t46125Z Brassica rapa HOM05D009418 ORTHO05D018626 1.1e-09 68.2 108 38.0
BcaB03g15637 Brassica carinata HOM05D009418 ORTHO05D027366 1.4e-09 67.8 157 28.7
BcaC08g46851 Brassica carinata HOM05D009418 ORTHO05D090315 1.4e-09 67.8 137 30.7
BcaB05g22096 Brassica carinata HOM05D009418 ORTHO05D011792 2.4e-09 67.0 137 29.9
BcaC05g24337 Brassica carinata HOM05D009418 ORTHO05D011792 2.4e-09 67.0 92 41.3
BcaC02g07853 Brassica carinata HOM05D009418 ORTHO05D002311 3.2e-09 66.6 141 31.2
BraSC36t46060Z Brassica rapa HOM05D005627 ORTHO05D042212 3.2e-09 66.6 124 33.1
BcaC01g03623 Brassica carinata HOM05D009418 ORTHO05D018626 4.2e-09 66.2 107 39.3
BcaC09g49041 Brassica carinata HOM05D006289 ORTHO05D032439 4.2e-09 66.2 84 36.9
A07p02760 Brassica napus HOM05D005627 ORTHO05D028293 4.2e-09 66.2 94 37.2
BolC4t27750H Brassica oleracea HOM05D009418 ORTHO05D018626 4.2e-09 66.2 108 37.0
BraA07t28076Z Brassica rapa HOM05D001038 ORTHO05D028293 4.2e-09 66.2 94 37.2
BcaB05g23461 Brassica carinata HOM05D009418 ORTHO05D011792 5.4e-09 65.9 124 32.3
BcaB08g35417 Brassica carinata HOM05D006289 ORTHO05D024275 7.1e-09 65.5 149 30.2
A03p68400 Brassica napus HOM05D005627 ORTHO05D017564 7.1e-09 65.5 55 56.4
BNapus_Darmor_BZH_scaffold_103p00100 Brassica napus HOM05D005627 ORTHO05D017564 7.1e-09 65.5 55 56.4
BNapus_Darmor_BZH_scaffold_104p00110 Brassica napus HOM05D005627 ORTHO05D017564 7.1e-09 65.5 55 56.4
C09p65560 Brassica napus HOM05D006289 ORTHO05D017568 7.1e-09 65.5 55 56.4
BraA01t02617Z Brassica rapa HOM05D005627 ORTHO05D017564 7.1e-09 65.5 55 56.4
BraA06t25653Z Brassica rapa HOM05D005627 ORTHO05D013519 7.1e-09 65.5 94 37.2
BraSC36t46108Z Brassica rapa HOM05D005627 ORTHO05D017564 7.1e-09 65.5 55 56.4
BcaB01g04195 Brassica carinata HOM05D009418 ORTHO05D018626 9.3e-09 65.1 92 40.2
A05p23620 Brassica napus HOM05D008838 ORTHO05D017574 9.3e-09 65.1 124 31.5
BraA05t21230Z Brassica rapa HOM05D008838 ORTHO05D017574 9.3e-09 65.1 124 31.5
BraA06t25336Z Brassica rapa HOM05D001038 ORTHO05D028293 9.3e-09 65.1 94 37.2
BcaC07g37194 Brassica carinata HOM05D005627 ORTHO05D011976 1.2e-08 64.7 102 38.2
BcaC01g02303 Brassica carinata HOM05D006289 ORTHO05D018698 2.1e-08 63.9 145 31.0
BcaC08g44170 Brassica carinata HOM05D009418 ORTHO05D017574 2.1e-08 63.9 116 31.0
BolC6t36759H Brassica oleracea HOM05D008838 ORTHO05D017574 2.1e-08 63.9 116 31.0
A06p10200 Brassica napus HOM05D006289 ORTHO05D019882 2.7e-08 63.5 93 41.9
BraA07t28074Z Brassica rapa HOM05D006289 ORTHO05D009842 2.7e-08 63.5 121 30.6
BraA07t28776Z Brassica rapa HOM05D005627 ORTHO05D017568 3.5e-08 63.2 56 53.6
BcaB04g17340 Brassica carinata HOM05D009418 ORTHO05D009842 4.6e-08 62.8 88 40.9
A01p23200 Brassica napus HOM05D001038 ORTHO05D000395 4.6e-08 62.8 89 39.3
BraA01t02229Z Brassica rapa HOM05D005627 ORTHO05D013519 4.6e-08 62.8 89 39.3
BolC9t58939H Brassica oleracea HOM05D008838 ORTHO05D011792 1.0e-07 61.6 122 30.3
BcaB07g33121 Brassica carinata HOM05D009418 ORTHO05D027366 1.3e-07 61.2 89 34.8
BcaC06g34913 Brassica carinata HOM05D006289 ORTHO05D009842 1.3e-07 61.2 117 32.5
BcaB02g06726 Brassica carinata HOM05D009418 ORTHO05D094631 1.7e-07 60.8 88 39.8
C05p48960 Brassica napus HOM05D008838 ORTHO05D017578 1.7e-07 60.8 93 34.4
A04p11380 Brassica napus HOM05D001038 ORTHO05D000395 2.3e-07 60.5 54 51.9
BraA02t08907Z Brassica rapa HOM05D001038 ORTHO05D000395 2.3e-07 60.5 54 51.9
BcaB02g10993 Brassica carinata HOM05D005627 ORTHO05D013519 5.1e-07 59.3 94 34.0
BraA04t16800Z Brassica rapa HOM05D001038 ORTHO05D000395 8.7e-07 58.5 54 50.0
BcaC06g35485 Brassica carinata HOM05D006289 ORTHO05D016037 1.1e-06 58.2 68 45.6
C04p40320 Brassica napus HOM05D009418 ORTHO05D018626 1.1e-06 58.2 108 38.0
BcaC05g27731 Brassica carinata HOM05D006289 ORTHO05D024275 1.9e-06 57.4 62 50.0
BraA06t25317Z Brassica rapa HOM05D005627 ORTHO05D013519 1.9e-06 57.4 95 33.7
BraA10t43452Z Brassica rapa HOM05D001038 ORTHO05D019929 1.9e-06 57.4 93 36.6
BcaB01g01859 Brassica carinata HOM05D005627 ORTHO05D013519 2.5e-06 57.0 122 29.5
A05p20430 Brassica napus HOM05D006289 ORTHO05D009842 2.5e-06 57.0 121 32.2
C01p21260 Brassica napus HOM05D001038 ORTHO05D000395 2.5e-06 57.0 84 38.1
C09p26130 Brassica napus HOM05D005627 ORTHO05D018690 3.3e-06 56.6 95 32.6
BolC2t11142H Brassica oleracea HOM05D005627 ORTHO05D018690 5.6e-06 55.8 103 31.1
BolC8t49548H Brassica oleracea HOM05D008838 ORTHO05D011792 5.6e-06 55.8 118 31.4
BcaC06g35245 Brassica carinata HOM05D005627 ORTHO05D018690 7.3e-06 55.5 95 30.5
BcaC06g36744 Brassica carinata HOM05D008838 ORTHO05D011792 7.3e-06 55.5 93 32.3
C08p05920 Brassica napus HOM05D005627 ORTHO05D018690 7.3e-06 55.5 95 31.6


User provided reference genes

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