Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g26970 Brassica carinata HOM05D007759 ORTHO05D008318 1.1e-53 213.0 101 100.0
A08p07380 Brassica napus HOM05D000305 ORTHO05D008318 3.1e-37 158.3 87 80.5
BraA08t32755Z Brassica rapa HOM05D007759 ORTHO05D008318 3.1e-37 158.3 87 80.5
BcaC09g50078 Brassica carinata HOM05D000305 ORTHO05D000065 5.5e-34 147.5 90 75.6
BcaC09g51523 Brassica carinata HOM05D007759 ORTHO05D008318 1.2e-33 146.4 87 75.9
C05p36840 Brassica napus HOM05D000305 ORTHO05D008318 2.3e-32 142.1 87 72.4
BcaC05g27701 Brassica carinata HOM05D007759 ORTHO05D008318 3.0e-32 141.7 87 72.4
BolC5t32424H Brassica oleracea HOM05D000305 ORTHO05D008318 3.1e-29 131.7 89 69.7
BcaB02g07732 Brassica carinata HOM05D007759 ORTHO05D008318 1.1e-26 123.2 87 58.6
BolC6t37317H Brassica oleracea HOM05D007759 ORTHO05D008318 1.4e-21 106.3 64 75.0
BcaC05g25628 Brassica carinata HOM05D007011 ORTHO05D008837 7.2e-18 94.0 84 50.0
BcaC08g46655 Brassica carinata HOM05D007759 ORTHO05D008318 9.4e-18 93.6 84 45.2
A07p18500 Brassica napus HOM05D007759 ORTHO05D008318 9.4e-18 93.6 84 47.6
BcaC03g17946 Brassica carinata HOM05D007759 ORTHO05D008318 3.6e-17 91.7 84 45.2
BcaC09g50938 Brassica carinata HOM05D007759 ORTHO05D008318 3.6e-17 91.7 91 42.9
C02p60070 Brassica napus HOM05D000305 ORTHO05D000065 3.6e-17 91.7 84 45.2
A07p25500 Brassica napus HOM05D007759 ORTHO05D008318 4.7e-17 91.3 84 46.4
BolC6t39668H Brassica oleracea HOM05D000305 ORTHO05D000065 1.4e-16 89.7 84 44.0
A09p15820 Brassica napus HOM05D007759 ORTHO05D008318 2.3e-16 89.0 84 44.0
A09p16180 Brassica napus HOM05D000305 ORTHO05D000065 2.3e-16 89.0 84 44.0
A05p26180 Brassica napus HOM05D007759 ORTHO05D008318 3.0e-16 88.6 84 44.0
C01p19090 Brassica napus HOM05D007759 ORTHO05D008318 3.0e-16 88.6 90 41.1
C01p11620 Brassica napus HOM05D007759 ORTHO05D008318 6.7e-16 87.4 90 42.2
C09p53520 Brassica napus HOM05D007759 ORTHO05D008318 6.7e-16 87.4 45 82.2
BolC6t36449H Brassica oleracea HOM05D007759 ORTHO05D008318 6.7e-16 87.4 84 44.0
BolC9t58228H Brassica oleracea HOM05D007759 ORTHO05D008318 6.7e-16 87.4 45 82.2
BraA09t37253Z Brassica rapa HOM05D000305 ORTHO05D000065 8.8e-16 87.0 84 44.0
A04p16590 Brassica napus HOM05D007759 ORTHO05D008318 1.1e-15 86.7 84 45.2
BcaC09g50071 Brassica carinata HOM05D007759 ORTHO05D008318 2.6e-15 85.5 61 70.5
BcaB04g19215 Brassica carinata HOM05D007759 ORTHO05D008318 3.3e-15 85.1 84 42.9
BcaC02g11605 Brassica carinata HOM05D007759 ORTHO05D008318 2.8e-14 82.0 84 42.9
C04p13390 Brassica napus HOM05D007759 ORTHO05D008318 2.8e-14 82.0 84 42.9
BcaNung02441 Brassica carinata HOM05D007759 ORTHO05D008318 4.8e-14 81.3 84 44.0
BraA04t15920Z Brassica rapa HOM05D009716 ORTHO05D008318 6.3e-14 80.9 80 40.0
A07p09660 Brassica napus HOM05D007759 ORTHO05D008318 8.2e-14 80.5 84 41.7
BraA05t20148Z Brassica rapa HOM05D007759 ORTHO05D008318 8.2e-14 80.5 84 42.9
A05p25410 Brassica napus HOM05D007759 ORTHO05D008318 1.1e-13 80.1 84 41.7
BraA03t13280Z Brassica rapa HOM05D007759 ORTHO05D008318 1.1e-13 80.1 84 41.7
A09p61940 Brassica napus HOM05D007759 ORTHO05D008318 1.8e-13 79.3 84 41.7
BraA03t15217Z Brassica rapa HOM05D009716 ORTHO05D008318 1.8e-13 79.3 82 39.0
BraA08t32106Z Brassica rapa HOM05D007759 ORTHO05D008318 3.1e-13 78.6 84 41.7
A09p35430 Brassica napus HOM05D007759 ORTHO05D008318 4.1e-13 78.2 84 41.7
A05p45000 Brassica napus HOM05D007759 ORTHO05D008318 5.3e-13 77.8 84 41.7
BraA02t06461Z Brassica rapa HOM05D007759 ORTHO05D008318 5.3e-13 77.8 90 38.9
BcaC05g28733 Brassica carinata HOM05D007759 ORTHO05D008318 9.1e-13 77.0 83 41.0
BolC1t02858H Brassica oleracea HOM05D007759 ORTHO05D008318 9.1e-13 77.0 90 47.8
BolC5t33570H Brassica oleracea HOM05D007759 ORTHO05D008318 9.1e-13 77.0 83 41.0
BcaC05g27963 Brassica carinata HOM05D007759 ORTHO05D008318 1.2e-12 76.6 84 41.7
C01p29320 Brassica napus HOM05D000305 ORTHO05D000065 1.2e-12 76.6 90 47.8
BolC8t48618H Brassica oleracea HOM05D009716 ORTHO05D008318 1.6e-12 76.3 79 38.0
C01p29370 Brassica napus HOM05D000305 ORTHO05D000065 2.0e-12 75.9 90 47.8
BolC8t46859H Brassica oleracea HOM05D009716 ORTHO05D008318 2.0e-12 75.9 82 36.6
BraA05t23159Z Brassica rapa HOM05D007759 ORTHO05D008318 2.0e-12 75.9 81 40.7
A03p64890 Brassica napus HOM05D007759 ORTHO05D008318 5.9e-12 74.3 84 39.3
BolC1t02876H Brassica oleracea HOM05D000305 ORTHO05D000065 5.9e-12 74.3 90 47.8
BolC7t43125H Brassica oleracea HOM05D009716 ORTHO05D008318 5.9e-12 74.3 82 36.6
Carub.0001s4072 Capsella rubella HOM05D007759 ORTHO05D008318 7.7e-12 73.9 78 41.0
BcaC04g21104 Brassica carinata HOM05D007759 ORTHO05D008318 6.5e-11 70.9 84 39.3
Carub.0003s3131 Capsella rubella HOM05D007759 ORTHO05D008318 4.2e-10 68.2 78 38.5
BcaC02g10745 Brassica carinata HOM05D007759 ORTHO05D008318 7.2e-10 67.4 69 44.9
C04p25470 Brassica napus HOM05D007759 ORTHO05D008318 7.2e-10 67.4 69 44.9
BolC4t24065H Brassica oleracea HOM05D007759 ORTHO05D008318 7.2e-10 67.4 69 44.9
Thhalv10002215m.g Eutrema salsugineum HOM05D007759 ORTHO05D008318 7.2e-10 67.4 78 39.7
BcaC01g02224 Brassica carinata HOM05D007759 ORTHO05D008318 2.1e-09 65.9 67 41.8
C03p67680 Brassica napus HOM05D007759 ORTHO05D008318 2.1e-09 65.9 67 41.8
BolSC21t60227H Brassica oleracea HOM05D007759 ORTHO05D008318 2.1e-09 65.9 67 41.8
BcaC05g27285 Brassica carinata HOM05D009716 ORTHO05D008318 1.0e-08 63.5 80 33.8
BcaC01g00595 Brassica carinata HOM05D007759 ORTHO05D008318 5.2e-08 61.2 84 38.1
BcaC02g10768 Brassica carinata HOM05D007759 ORTHO05D008318 1.1e-07 60.1 70 40.0
C04p25320 Brassica napus HOM05D007759 ORTHO05D008318 1.1e-07 60.1 70 40.0


User provided reference genes

Program Settings