Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g26931 Brassica carinata HOM05D007693 ORTHO05D015462 1.6e-73 279.3 135 100.0
BcaB07g33915 Brassica carinata HOM05D007693 ORTHO05D015462 1.8e-64 249.2 135 90.4
BcaB07g33397 Brassica carinata HOM05D004489 ORTHO05D000740 4.3e-58 228.0 122 88.5
BcaB07g33925 Brassica carinata HOM05D000888 ORTHO05D000740 1.5e-55 219.5 122 85.2
BcaB04g18049 Brassica carinata HOM05D007693 ORTHO05D015462 4.4e-55 218.0 135 79.3
BcaB05g23148 Brassica carinata HOM05D007693 ORTHO05D002086 4.3e-42 174.9 93 88.2
BcaB07g32575 Brassica carinata HOM05D000888 ORTHO05D000740 2.0e-31 139.4 80 90.0
C02p24700 Brassica napus HOM05D004489 ORTHO05D098125 1.9e-21 106.3 85 69.4
BcaB04g17007 Brassica carinata HOM05D003591 ORTHO05D015462 1.9e-18 96.3 56 78.6
BcaC02g11524 Brassica carinata HOM05D004489 ORTHO05D010056 3.3e-18 95.5 85 63.5
BNapus_Darmor_BZH_scaffold_103p00030 Brassica napus HOM05D003591 ORTHO05D015462 8.1e-17 90.9 56 67.9
BNapus_Darmor_BZH_scaffold_104p00030 Brassica napus HOM05D003591 ORTHO05D015462 8.1e-17 90.9 56 67.9
BraSC36t46101Z Brassica rapa HOM05D003591 ORTHO05D015462 8.1e-17 90.9 56 67.9
BraA09t38695Z Brassica rapa HOM05D003591 ORTHO05D015462 1.8e-16 89.7 56 66.1
BcaB03g16456 Brassica carinata HOM05D003591 ORTHO05D005681 4.0e-16 88.6 54 83.3
BraA03t15698Z Brassica rapa HOM05D003591 ORTHO05D015462 1.2e-15 87.0 56 66.1
BraA07t28411Z Brassica rapa HOM05D003591 ORTHO05D015462 1.3e-14 83.6 56 64.3
C04p13460 Brassica napus HOM05D003591 ORTHO05D015462 6.4e-14 81.3 52 63.5
BcaC07g37014 Brassica carinata HOM05D007693 ORTHO05D002086 1.1e-13 80.5 114 37.7
A04p22190 Brassica napus HOM05D007693 ORTHO05D002086 2.4e-13 79.3 101 41.6
BraA05t22114Z Brassica rapa HOM05D007693 ORTHO05D002086 2.4e-13 79.3 101 41.6
BraA10t43040Z Brassica rapa HOM05D007693 ORTHO05D002086 2.4e-13 79.3 101 41.6
BraA06t24544Z Brassica rapa HOM05D007693 ORTHO05D002086 3.2e-13 79.0 84 45.2
BcaB07g32567 Brassica carinata HOM05D001038 ORTHO05D010763 5.5e-13 78.2 93 43.0
BcaB06g27481 Brassica carinata HOM05D007693 ORTHO05D002086 1.2e-12 77.0 104 38.5
A03p67750 Brassica napus HOM05D003591 ORTHO05D015462 2.1e-12 76.3 56 60.7
BcaC04g21625 Brassica carinata HOM05D001038 ORTHO05D016703 6.7e-11 71.2 84 40.5
Sp5g15320 Schrenkiella parvula HOM05D007693 ORTHO05D002086 6.7e-11 71.2 78 43.6
AL2G18820 Arabidopsis lyrata HOM05D007693 ORTHO05D002086 1.1e-10 70.5 150 31.3
AL4G16420 Arabidopsis lyrata HOM05D007693 ORTHO05D002086 1.1e-10 70.5 150 31.3
BcaC06g35712 Brassica carinata HOM05D007693 ORTHO05D002086 1.1e-10 70.5 78 44.9
SpUn1230_0020 Schrenkiella parvula HOM05D007693 ORTHO05D002086 1.5e-10 70.1 149 32.9
BcaB04g20521 Brassica carinata HOM05D007693 ORTHO05D002086 2.5e-10 69.3 85 41.2
Thhalv10003330m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 2.5e-10 69.3 59 52.5
BolC8t47992H Brassica oleracea HOM05D007693 ORTHO05D002086 4.3e-10 68.6 145 33.8
Carub.0003s3077 Capsella rubella HOM05D007693 ORTHO05D002086 4.3e-10 68.6 129 32.6
BcaC02g11475 Brassica carinata HOM05D007693 ORTHO05D002086 5.6e-10 68.2 139 32.4
AL22U10020 Arabidopsis lyrata HOM05D007693 ORTHO05D002086 7.4e-10 67.8 150 31.3
BcaB04g16994 Brassica carinata HOM05D007693 ORTHO05D002086 7.4e-10 67.8 143 33.6
Thhalv10029337m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 9.6e-10 67.4 65 49.2
BcaB05g22932 Brassica carinata HOM05D007693 ORTHO05D002086 1.3e-09 67.0 146 34.2
BcaC06g33294 Brassica carinata HOM05D007693 ORTHO05D002086 1.3e-09 67.0 79 44.3
BolC1t02623H Brassica oleracea HOM05D007462 ORTHO05D011074 1.3e-09 67.0 116 34.5
Sp5g21400 Schrenkiella parvula HOM05D018387 ORTHO05D002086 1.3e-09 67.0 93 38.7
AL1G49470 Arabidopsis lyrata HOM05D007693 ORTHO05D002086 2.1e-09 66.2 85 41.2
AL9U10420 Arabidopsis lyrata HOM05D007693 ORTHO05D002086 2.1e-09 66.2 85 41.2
BcaC01g05867 Brassica carinata HOM05D007462 ORTHO05D011074 2.1e-09 66.2 116 33.6
BcaC04g22910 Brassica carinata HOM05D007462 ORTHO05D011074 2.1e-09 66.2 116 33.6
BcaC07g38352 Brassica carinata HOM05D007462 ORTHO05D011074 2.1e-09 66.2 116 33.6
BcaB02g10221 Brassica carinata HOM05D007693 ORTHO05D002086 2.8e-09 65.9 148 30.4
BcaC05g28311 Brassica carinata HOM05D007693 ORTHO05D002086 2.8e-09 65.9 149 32.2
BcaB05g24592 Brassica carinata HOM05D007693 ORTHO05D002086 3.7e-09 65.5 61 45.9
Sp6g12290 Schrenkiella parvula HOM05D007693 ORTHO05D002086 4.8e-09 65.1 102 37.3
AT2G06265 Arabidopsis thaliana HOM05D007693 ORTHO05D002086 6.2e-09 64.7 85 41.2
BcaB06g29566 Brassica carinata HOM05D007693 ORTHO05D002086 6.2e-09 64.7 78 43.6
BcaC03g14143 Brassica carinata HOM05D007462 ORTHO05D011074 6.2e-09 64.7 108 29.6
BcaC05g28526 Brassica carinata HOM05D000977 ORTHO05D002086 8.2e-09 64.3 156 30.8
Thhalv10012038m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 8.2e-09 64.3 74 40.5
BcaC05g28653 Brassica carinata HOM05D007462 ORTHO05D011074 1.1e-08 63.9 116 32.8
BolC3t20530H Brassica oleracea HOM05D007693 ORTHO05D002086 1.1e-08 63.9 77 42.9
AT2G07505 Arabidopsis thaliana HOM05D007693 ORTHO05D002086 1.4e-08 63.5 61 50.8
BcaC03g15315 Brassica carinata HOM05D007693 ORTHO05D002086 1.4e-08 63.5 72 43.1
BcaC05g25266 Brassica carinata HOM05D007693 ORTHO05D002086 1.8e-08 63.2 74 41.9
BcaC08g44290 Brassica carinata HOM05D007693 ORTHO05D002086 1.8e-08 63.2 148 32.4
Sp7g02510 Schrenkiella parvula HOM05D007693 ORTHO05D002086 5.3e-08 61.6 57 45.6
BcaB06g26738 Brassica carinata HOM05D007462 ORTHO05D002086 6.9e-08 61.2 65 41.5
BcaC05g26662 Brassica carinata HOM05D007462 ORTHO05D011074 6.9e-08 61.2 116 30.2
Sp1g34950 Schrenkiella parvula HOM05D007693 ORTHO05D002086 6.9e-08 61.2 118 33.9
BcaC01g00556 Brassica carinata HOM05D007693 ORTHO05D002086 1.2e-07 60.5 58 48.3
BcaC05g29744 Brassica carinata HOM05D007693 ORTHO05D002086 1.2e-07 60.5 75 44.0
BcaC06g32504 Brassica carinata HOM05D007693 ORTHO05D002086 1.2e-07 60.5 75 44.0
C05p36680 Brassica napus HOM05D007693 ORTHO05D002086 1.2e-07 60.5 93 36.6
C07p06000 Brassica napus HOM05D007693 ORTHO05D002086 1.2e-07 60.5 58 48.3
BolC7t41011H Brassica oleracea HOM05D007693 ORTHO05D002086 1.2e-07 60.5 58 48.3
CARHR148640 Cardamine hirsuta HOM05D000675 ORTHO05D002086 1.2e-07 60.5 89 34.8
CARHR151940 Cardamine hirsuta HOM05D000675 ORTHO05D002086 1.2e-07 60.5 109 33.0
BolC5t32402H Brassica oleracea HOM05D007693 ORTHO05D002086 1.5e-07 60.1 93 36.6
BraA06t25204Z Brassica rapa HOM05D007693 ORTHO05D002086 1.5e-07 60.1 58 48.3
CARHR055980 Cardamine hirsuta HOM05D007693 ORTHO05D002086 1.5e-07 60.1 87 33.3
CARHR108830 Cardamine hirsuta HOM05D007693 ORTHO05D002086 2.0e-07 59.7 87 34.5
Thhalv10017745m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 2.0e-07 59.7 67 38.8
BcaB02g06468 Brassica carinata HOM05D007693 ORTHO05D002086 2.6e-07 59.3 58 48.3
BcaC03g14861 Brassica carinata HOM05D007462 ORTHO05D011074 2.6e-07 59.3 108 28.7
BcaB04g17468 Brassica carinata HOM05D007462 ORTHO05D011074 3.4e-07 58.9 123 29.3
BcaNung00058 Brassica carinata HOM05D007462 ORTHO05D011074 3.4e-07 58.9 115 30.4
AT4G04775 Arabidopsis thaliana HOM05D000675 ORTHO05D002086 4.5e-07 58.5 98 31.6
AT5G15690 Arabidopsis thaliana HOM05D000675 ORTHO05D002086 4.5e-07 58.5 98 30.6
BcaB08g34442 Brassica carinata HOM05D007693 ORTHO05D002086 4.5e-07 58.5 74 41.9
BraA10t43661Z Brassica rapa HOM05D007693 ORTHO05D002086 4.5e-07 58.5 61 47.5
Sp7g13130 Schrenkiella parvula HOM05D007693 ORTHO05D002086 4.5e-07 58.5 147 29.9
BcaC01g01799 Brassica carinata HOM05D007462 ORTHO05D011074 5.8e-07 58.2 93 33.3
BolC8t49549H Brassica oleracea HOM05D007693 ORTHO05D002086 1.3e-06 57.0 54 50.0
BraA05t20011Z Brassica rapa HOM05D007462 ORTHO05D002086 1.3e-06 57.0 95 31.6
Carub.0008s1552 Capsella rubella HOM05D000675 ORTHO05D002086 1.3e-06 57.0 82 40.2
BcaB04g19467 Brassica carinata HOM05D000675 ORTHO05D002086 1.7e-06 56.6 102 28.4
BcaC06g35366 Brassica carinata HOM05D000675 ORTHO05D002086 1.7e-06 56.6 116 30.2
BcaNung03744 Brassica carinata HOM05D000675 ORTHO05D002086 1.7e-06 56.6 129 28.7
Thhalv10003362m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 1.7e-06 56.6 61 41.0
Sp6g08580 Schrenkiella parvula HOM05D018387 ORTHO05D002086 1.7e-06 56.6 100 32.0
THA.LOC104817596 Tarenaya hassleriana HOM05D007462 ORTHO05D002086 1.7e-06 56.6 89 33.7
AL1G59920 Arabidopsis lyrata HOM05D025401 ORTHO05D026774 2.2e-06 56.2 82 32.9
BcaC03g14636 Brassica carinata HOM05D007693 ORTHO05D002086 2.2e-06 56.2 75 41.3
BcaB03g16439 Brassica carinata HOM05D007462 ORTHO05D011074 2.9e-06 55.8 114 33.3
BcaB04g19811 Brassica carinata HOM05D007462 ORTHO05D002086 2.9e-06 55.8 60 46.7
BraA02t08314Z Brassica rapa HOM05D007462 ORTHO05D002086 2.9e-06 55.8 100 28.0
CARHR293330 Cardamine hirsuta HOM05D000675 ORTHO05D002086 2.9e-06 55.8 70 34.3
BcaB04g17689 Brassica carinata HOM05D007462 ORTHO05D002086 3.8e-06 55.5 79 35.4
C04p58390 Brassica napus HOM05D007462 ORTHO05D002086 3.8e-06 55.5 94 28.7
BraA01t02125Z Brassica rapa HOM05D007462 ORTHO05D002086 3.8e-06 55.5 79 34.2
Aa31sc689G30 Aethionema arabicum HOM05D000675 ORTHO05D002086 4.9e-06 55.1 84 31.0
BcaC09g50767 Brassica carinata HOM05D007462 ORTHO05D011074 4.9e-06 55.1 104 26.9
BraA01t02729Z Brassica rapa HOM05D007462 ORTHO05D002086 4.9e-06 55.1 101 27.7
Thhalv10011039m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 4.9e-06 55.1 131 30.5
BcaB04g17832 Brassica carinata HOM05D007693 ORTHO05D002086 6.5e-06 54.7 61 47.5
BcaC06g36209 Brassica carinata HOM05D000977 ORTHO05D002086 8.4e-06 54.3 121 33.9
BraA05t21229Z Brassica rapa HOM05D007462 ORTHO05D002086 8.4e-06 54.3 54 40.7
Sp7g12150 Schrenkiella parvula HOM05D007693 ORTHO05D002086 8.4e-06 54.3 124 28.2


User provided reference genes

Program Settings