Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g26768 Brassica carinata HOM05D000471 ORTHO05D000199 1.1e-206 723.4 444 100.0
BcaB05g23845 Brassica carinata HOM05D000471 ORTHO05D000199 2.3e-145 519.6 311 90.7
BcaB08g37414 Brassica carinata HOM05D000471 ORTHO05D000199 4.0e-81 306.2 171 97.7
BcaB08g34971 Brassica carinata HOM05D000471 ORTHO05D000199 2.2e-55 220.7 121 86.8
C05p37680 Brassica napus HOM05D000471 ORTHO05D000199 8.2e-50 202.2 272 45.6
BolC5t32511H Brassica oleracea HOM05D000471 ORTHO05D000199 1.5e-46 191.4 172 59.3
A05p29030 Brassica napus HOM05D000471 ORTHO05D000199 1.2e-45 188.3 172 58.1
C06p16640 Brassica napus HOM05D000471 ORTHO05D000199 4.7e-45 186.4 172 57.6
A07p12530 Brassica napus HOM05D000471 ORTHO05D000199 8.0e-45 185.7 172 57.6
C06p09110 Brassica napus HOM05D000471 ORTHO05D000199 2.3e-44 184.1 172 57.0
C03p66080 Brassica napus HOM05D000471 ORTHO05D000199 5.2e-44 183.0 202 52.5
C09p52520 Brassica napus HOM05D000471 ORTHO05D000199 6.8e-44 182.6 172 58.7
BolC5t32887H Brassica oleracea HOM05D000471 ORTHO05D000199 6.8e-44 182.6 173 56.6
BolC9t58118H Brassica oleracea HOM05D000471 ORTHO05D000199 6.8e-44 182.6 172 58.7
C04p30610 Brassica napus HOM05D000471 ORTHO05D000199 5.7e-43 179.5 202 51.5
C08p09140 Brassica napus HOM05D000471 ORTHO05D000199 1.7e-42 177.9 172 55.8
BcaC09g51281 Brassica carinata HOM05D000471 ORTHO05D015456 3.7e-42 176.8 164 57.9
BcaC05g27767 Brassica carinata HOM05D000471 ORTHO05D015456 1.4e-41 174.9 158 59.5
BolC2t10781H Brassica oleracea HOM05D000471 ORTHO05D000199 2.4e-41 174.1 190 52.6
C05p41480 Brassica napus HOM05D000471 ORTHO05D000199 3.1e-41 173.7 182 54.4
BcaB08g35230 Brassica carinata HOM05D000471 ORTHO05D015456 3.8e-39 166.8 155 59.4
BcaC07g37438 Brassica carinata HOM05D000471 ORTHO05D015456 3.8e-39 166.8 164 55.5
BcaC05g28117 Brassica carinata HOM05D000471 ORTHO05D015456 1.9e-38 164.5 158 56.3
BolC3t18881H Brassica oleracea HOM05D000471 ORTHO05D000199 7.2e-38 162.5 175 52.6
BolC9t54977H Brassica oleracea HOM05D000471 ORTHO05D000199 3.6e-37 160.2 154 54.5
BcaC04g22313 Brassica carinata HOM05D000471 ORTHO05D015456 1.0e-36 158.7 146 57.5
C04p39280 Brassica napus HOM05D000471 ORTHO05D000199 3.0e-36 157.1 143 57.3
C02p47380 Brassica napus HOM05D000471 ORTHO05D000199 2.0e-35 154.5 177 50.3
BcaB04g17216 Brassica carinata HOM05D000471 ORTHO05D093239 3.6e-29 133.7 77 89.6
BcaB06g26079 Brassica carinata HOM05D000471 ORTHO05D091218 1.4e-28 131.7 78 87.2
BolC9t55313H Brassica oleracea HOM05D000471 ORTHO05D000199 6.8e-28 129.4 159 45.3
BcaB04g17873 Brassica carinata HOM05D000471 ORTHO05D000199 8.9e-28 129.0 75 84.0
A06p22860 Brassica napus HOM05D000471 ORTHO05D000199 5.0e-23 113.2 105 55.2
BcaC04g22065 Brassica carinata HOM05D000471 ORTHO05D000199 1.5e-22 111.7 148 45.3
C09p20800 Brassica napus HOM05D000471 ORTHO05D000199 4.3e-22 110.2 105 54.3
BraA06t25390Z Brassica rapa HOM05D000471 ORTHO05D015456 9.5e-22 109.0 96 58.3
BcaB07g32558 Brassica carinata HOM05D000471 ORTHO05D000199 2.1e-21 107.8 86 57.0
BraSC35t46011Z Brassica rapa HOM05D000471 ORTHO05D000199 2.0e-19 101.3 97 50.5
C02p57260 Brassica napus HOM05D000471 ORTHO05D015456 2.6e-19 100.9 59 69.5
BcaB05g23800 Brassica carinata HOM05D000471 ORTHO05D000199 7.5e-19 99.4 169 41.4
BcaC01g02209 Brassica carinata HOM05D000471 ORTHO05D015456 1.7e-18 98.2 116 50.0
BcaC04g19656 Brassica carinata HOM05D000471 ORTHO05D000199 1.7e-18 98.2 108 56.5
BolC8t47761H Brassica oleracea HOM05D000471 ORTHO05D000199 4.9e-18 96.7 87 56.3
BcaC01g02364 Brassica carinata HOM05D000471 ORTHO05D000199 3.5e-16 90.5 108 51.9
C01p17290 Brassica napus HOM05D000471 ORTHO05D000199 4.6e-16 90.1 91 57.1
C03p67790 Brassica napus HOM05D000471 ORTHO05D015456 1.0e-15 89.0 107 49.5
BolSC21t60246H Brassica oleracea HOM05D000471 ORTHO05D015456 1.0e-15 89.0 107 49.5
A10p04540 Brassica napus HOM05D000471 ORTHO05D000199 3.3e-14 84.0 67 59.7
BcaC09g51072 Brassica carinata HOM05D000471 ORTHO05D000199 6.2e-13 79.7 67 56.7
BcaC03g16851 Brassica carinata HOM05D000471 ORTHO05D000199 1.1e-12 79.0 67 56.7
A05p09010 Brassica napus HOM05D000471 ORTHO05D000199 1.8e-12 78.2 167 34.7
A05p26660 Brassica napus HOM05D000471 ORTHO05D000199 6.8e-12 76.3 182 32.4
A09p44860 Brassica napus HOM05D000471 ORTHO05D000199 1.2e-11 75.5 167 34.7
C02p34660 Brassica napus HOM05D000471 ORTHO05D000199 1.5e-11 75.1 182 31.9
BolC1t02448H Brassica oleracea HOM05D000471 ORTHO05D000199 1.5e-11 75.1 191 33.5
BcaB02g11509 Brassica carinata HOM05D015666 ORTHO05D019915 3.4e-11 73.9 51 68.6
BcaC05g27721 Brassica carinata HOM05D000471 ORTHO05D024295 5.8e-11 73.2 137 32.8
C01p25040 Brassica napus HOM05D000471 ORTHO05D000199 5.8e-11 73.2 185 31.9
C04p28660 Brassica napus HOM05D000471 ORTHO05D000199 7.5e-11 72.8 162 34.6
BcaC02g09172 Brassica carinata HOM05D000471 ORTHO05D000199 1.7e-10 71.6 108 46.3
C05p34790 Brassica napus HOM05D000471 ORTHO05D000199 2.2e-10 71.2 170 32.4
BolC8t48263H Brassica oleracea HOM05D000471 ORTHO05D000199 2.9e-10 70.9 171 32.2
A03p66800 Brassica napus HOM05D000471 ORTHO05D000199 6.4e-10 69.7 150 34.7
BolC6t36870H Brassica oleracea HOM05D000471 ORTHO05D000199 6.4e-10 69.7 159 31.4
BcaB06g27194 Brassica carinata HOM05D000471 ORTHO05D013512 8.3e-10 69.3 160 30.0
A08p30620 Brassica napus HOM05D000471 ORTHO05D000199 8.3e-10 69.3 146 36.3
BolC5t32495H Brassica oleracea HOM05D000471 ORTHO05D000199 8.3e-10 69.3 147 32.7
A10p14660 Brassica napus HOM05D000471 ORTHO05D000199 1.4e-09 68.6 133 36.8
C06p16710 Brassica napus HOM05D000471 ORTHO05D000199 1.4e-09 68.6 157 33.8
BcaB04g17819 Brassica carinata HOM05D000471 ORTHO05D000199 1.9e-09 68.2 152 30.3
C01p37480 Brassica napus HOM05D000471 ORTHO05D000199 1.9e-09 68.2 160 27.5
BraSC36t46070Z Brassica rapa HOM05D000471 ORTHO05D000199 2.4e-09 67.8 169 30.8
Sp5g17020 Schrenkiella parvula HOM05D003739 ORTHO05D003996 2.4e-09 67.8 66 51.5
BolC6t37107H Brassica oleracea HOM05D000471 ORTHO05D013512 5.4e-09 66.6 96 38.5
C07p33570 Brassica napus HOM05D000471 ORTHO05D000199 9.2e-09 65.9 137 32.8
BolC3t18324H Brassica oleracea HOM05D000471 ORTHO05D000199 9.2e-09 65.9 168 30.4
A07p40940 Brassica napus HOM05D000471 ORTHO05D000199 1.2e-08 65.5 133 36.1
C08p09090 Brassica napus HOM05D000471 ORTHO05D000199 1.6e-08 65.1 159 30.8
C01p14860 Brassica napus HOM05D000471 ORTHO05D015456 4.6e-08 63.5 90 44.4
BcaC01g02210 Brassica carinata HOM05D000471 ORTHO05D027229 6.0e-08 63.2 52 61.5
C05p33730 Brassica napus HOM05D000471 ORTHO05D000199 6.0e-08 63.2 79 39.2
Thhalv10019787m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 6.0e-08 63.2 143 26.6
C09p27430 Brassica napus HOM05D000471 ORTHO05D027229 7.8e-08 62.8 53 60.4
BolC1t03718H Brassica oleracea HOM05D000471 ORTHO05D000199 7.8e-08 62.8 160 26.2
C02p43170 Brassica napus HOM05D000471 ORTHO05D000199 1.3e-07 62.0 177 27.7
BolC5t32312H Brassica oleracea HOM05D000471 ORTHO05D000199 1.7e-07 61.6 89 41.6
A03p66530 Brassica napus HOM05D000471 ORTHO05D000199 2.3e-07 61.2 195 29.7
C09p27730 Brassica napus HOM05D000471 ORTHO05D000199 2.3e-07 61.2 172 29.1
BraA09t38317Z Brassica rapa HOM05D000471 ORTHO05D000199 2.3e-07 61.2 64 46.9
A01p23110 Brassica napus HOM05D000471 ORTHO05D000199 3.0e-07 60.8 161 32.3
BraA05t21071Z Brassica rapa HOM05D000471 ORTHO05D000199 3.0e-07 60.8 81 43.2
C09p54740 Brassica napus HOM05D000471 ORTHO05D000199 3.9e-07 60.5 159 29.6
Thhalv10002160m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 3.9e-07 60.5 143 25.2
Thhalv10023860m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 5.1e-07 60.1 143 23.8
C06p05070 Brassica napus HOM05D000471 ORTHO05D000199 6.6e-07 59.7 61 45.9
C08p08800 Brassica napus HOM05D000471 ORTHO05D000199 6.6e-07 59.7 61 42.6
C09p09790 Brassica napus HOM05D000471 ORTHO05D000199 6.6e-07 59.7 61 45.9
C04p28410 Brassica napus HOM05D000471 ORTHO05D000199 8.6e-07 59.3 140 28.6
C08p22850 Brassica napus HOM05D000471 ORTHO05D000199 8.6e-07 59.3 150 31.3
BolC4t24387H Brassica oleracea HOM05D000471 ORTHO05D000199 8.6e-07 59.3 140 28.6
BolC7t43866H Brassica oleracea HOM05D000471 ORTHO05D000199 8.6e-07 59.3 139 30.9
Thhalv10026990m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 8.6e-07 59.3 181 23.8
BcaC06g35815 Brassica carinata HOM05D000471 ORTHO05D000199 1.1e-06 58.9 73 41.1
C03p70580 Brassica napus HOM05D000471 ORTHO05D000199 1.1e-06 58.9 147 31.3
C04p33860 Brassica napus HOM05D000471 ORTHO05D013512 1.1e-06 58.9 108 35.2
C07p04030 Brassica napus HOM05D000471 ORTHO05D000199 1.1e-06 58.9 136 30.1
Thhalv10012223m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 1.1e-06 58.9 143 23.8
Thhalv10028194m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 1.1e-06 58.9 143 23.8
C02p16660 Brassica napus HOM05D000471 ORTHO05D000199 1.5e-06 58.5 194 28.9
C04p46520 Brassica napus HOM05D000471 ORTHO05D000199 1.5e-06 58.5 163 31.3
BolC4t23190H Brassica oleracea HOM05D000471 ORTHO05D000199 1.5e-06 58.5 172 30.2
BolC6t35529H Brassica oleracea HOM05D000471 ORTHO05D000199 1.5e-06 58.5 158 31.0
C04p20310 Brassica napus HOM05D000471 ORTHO05D000199 2.5e-06 57.8 68 38.2
C06p16800 Brassica napus HOM05D000471 ORTHO05D000199 2.5e-06 57.8 59 49.2
C09p23420 Brassica napus HOM05D000471 ORTHO05D000199 2.5e-06 57.8 102 37.3
BolC2t10745H Brassica oleracea HOM05D000471 ORTHO05D000199 2.5e-06 57.8 180 28.3
BolC6t36878H Brassica oleracea HOM05D000471 ORTHO05D000199 2.5e-06 57.8 59 49.2
BolC6t38315H Brassica oleracea HOM05D000471 ORTHO05D000199 2.5e-06 57.8 167 28.1
BolC9t55262H Brassica oleracea HOM05D000471 ORTHO05D000199 2.5e-06 57.8 102 37.3
BcaC09g49282 Brassica carinata HOM05D000471 ORTHO05D024295 3.3e-06 57.4 91 35.2
Thhalv10002183m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 3.3e-06 57.4 143 23.1
Thhalv10002223m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 3.3e-06 57.4 143 23.1
Thhalv10019524m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 3.3e-06 57.4 127 25.2
C09p51680 Brassica napus HOM05D000471 ORTHO05D000199 4.3e-06 57.0 166 27.1
BolC1t02994H Brassica oleracea HOM05D000471 ORTHO05D000199 4.3e-06 57.0 61 44.3
A05p21420 Brassica napus HOM05D000471 ORTHO05D042818 7.3e-06 56.2 164 29.3
BolC9t56743H Brassica oleracea HOM05D000471 ORTHO05D000199 7.3e-06 56.2 104 36.5
BraA05t21051Z Brassica rapa HOM05D000471 ORTHO05D042818 7.3e-06 56.2 164 29.3
BolC3t20378H Brassica oleracea HOM05D000471 ORTHO05D000199 9.5e-06 55.8 153 28.8
Thhalv10017755m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 9.5e-06 55.8 143 23.8


User provided reference genes

Program Settings