Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g26765 Brassica carinata HOM05D014235 ORTHO05D013145 5.1e-48 194.1 100 100.0
BcaC06g35826 Brassica carinata HOM05D014235 ORTHO05D013145 5.1e-48 194.1 100 100.0
C07p10440 Brassica napus HOM05D014235 ORTHO05D013145 1.1e-45 186.4 98 96.9
BcaC06g35825 Brassica carinata HOM05D014235 ORTHO05D013145 2.3e-45 185.3 100 95.0
A07p06860 Brassica napus HOM05D014235 ORTHO05D013145 5.2e-45 184.1 98 95.9
BolC7t41514H Brassica oleracea HOM05D014235 ORTHO05D013145 8.9e-45 183.3 98 94.9
BraA07t28478Z Brassica rapa HOM05D014235 ORTHO05D013145 1.5e-44 182.6 98 94.9
Sp3g23070 Schrenkiella parvula HOM05D000184 ORTHO05D013145 1.4e-34 149.4 114 71.9
Thhalv10002873m.g Eutrema salsugineum HOM05D000184 ORTHO05D013145 4.6e-33 144.4 123 67.5
AT2G06020 Arabidopsis thaliana HOM05D000184 ORTHO05D013145 4.2e-26 121.3 110 59.1
CARHR103700 Cardamine hirsuta HOM05D000184 ORTHO05D013145 3.0e-24 115.2 115 58.3
Carub.0003s2715 Capsella rubella HOM05D000184 ORTHO05D013145 5.3e-21 104.4 107 56.1
BcaB06g26764 Brassica carinata HOM05D014235 ORTHO05D013145 2.3e-16 89.0 49 95.9
THA.LOC104808826 Tarenaya hassleriana HOM05D000184 ORTHO05D013145 2.1e-09 65.9 117 35.9
Aa31sc231G10 Aethionema arabicum HOM05D000184 ORTHO05D013145 1.8e-08 62.8 97 40.2
Lj6A558G54 Lonicera japonica HOM05D000184 ORTHO05D000032 3.7e-06 55.1 34 67.6
MBI15_g26852_MAGBIO Magnolia biondii HOM05D000184 ORTHO05D000032 4.8e-06 54.7 38 55.3
vmacro00478 Vaccinium macrocarpon HOM05D000184 ORTHO05D000032 4.8e-06 54.7 35 62.9
Ciclev10016073m.g Citrus clementina HOM05D000184 ORTHO05D000032 6.2e-06 54.3 35 62.9
ECA233G3792 Erigeron canadensis HOM05D000184 ORTHO05D000032 6.2e-06 54.3 72 41.7
Oeu015950.1 Olea europaea HOM05D000184 ORTHO05D000032 6.2e-06 54.3 34 64.7
Rhsim09G0055800 Rhododendron simsii HOM05D000184 ORTHO05D000032 6.2e-06 54.3 35 62.9
DCAR_026609 Daucus carota HOM05D000184 ORTHO05D000032 8.2e-06 53.9 35 62.9
HanXRQChr02g0058891 Helianthus annuus HOM05D000184 ORTHO05D000032 8.2e-06 53.9 34 64.7


User provided reference genes

Program Settings