Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g26727 Brassica carinata HOM05D001498 ORTHO05D093134 1.3e-74 283.1 160 100.0
BcaB06g27273 Brassica carinata HOM05D001498 ORTHO05D094467 1.3e-61 240.0 161 88.8
BcaB01g01816 Brassica carinata HOM05D001498 ORTHO05D091844 2.3e-58 229.2 152 89.5
BcaB07g33217 Brassica carinata HOM05D001498 ORTHO05D093085 3.4e-46 188.7 162 76.5
BcaC05g26789 Brassica carinata HOM05D001498 ORTHO05D094205 1.4e-44 183.3 135 85.2
BcaB05g23244 Brassica carinata HOM05D001498 ORTHO05D095601 1.7e-42 176.4 161 73.3
BcaB07g33084 Brassica carinata HOM05D001498 ORTHO05D092207 1.7e-42 176.4 156 74.4
BcaB03g16286 Brassica carinata HOM05D001498 ORTHO05D093797 7.1e-28 127.9 161 59.6
BcaB06g26480 Brassica carinata HOM05D001498 ORTHO05D094428 4.6e-27 125.2 162 59.3
BcaB04g17776 Brassica carinata HOM05D001498 ORTHO05D092868 1.8e-26 123.2 177 48.6
BcaB07g33317 Brassica carinata HOM05D001498 ORTHO05D096108 3.7e-24 115.5 152 59.9
BcaB01g01484 Brassica carinata HOM05D001498 ORTHO05D091615 1.4e-23 113.6 158 49.4
A08p07550 Brassica napus HOM05D001498 ORTHO05D011506 1.6e-19 100.1 181 43.1
BcaB07g32989 Brassica carinata HOM05D001498 ORTHO05D008559 3.5e-19 99.0 138 48.6
BolC5t31266H Brassica oleracea HOM05D001498 ORTHO05D019959 3.5e-19 99.0 100 56.0
BcaB03g16152 Brassica carinata HOM05D001498 ORTHO05D093112 1.3e-18 97.1 100 58.0
BcaB07g32913 Brassica carinata HOM05D001498 ORTHO05D091922 1.3e-18 97.1 85 62.4
BcaB07g33220 Brassica carinata HOM05D001498 ORTHO05D096371 3.9e-18 95.5 84 61.9
C09p16580 Brassica napus HOM05D001498 ORTHO05D011506 3.9e-18 95.5 180 40.6
BolC2t11288H Brassica oleracea HOM05D001498 ORTHO05D011506 5.1e-18 95.1 169 43.2
C07p49110 Brassica napus HOM05D001498 ORTHO05D097837 8.7e-18 94.4 181 42.0
BcaB05g23120 Brassica carinata HOM05D001498 ORTHO05D090647 1.1e-17 94.0 100 57.0
BraA08t32774Z Brassica rapa HOM05D001498 ORTHO05D001885 5.6e-17 91.7 174 42.0
BcaB04g17678 Brassica carinata HOM05D001498 ORTHO05D094760 9.6e-17 90.9 160 45.6
BcaC02g11926 Brassica carinata HOM05D001498 ORTHO05D019959 9.6e-17 90.9 100 51.0
C01p30560 Brassica napus HOM05D001498 ORTHO05D011506 1.3e-16 90.5 158 45.6
BcaB01g03187 Brassica carinata HOM05D001498 ORTHO05D090608 2.1e-16 89.7 109 55.0
C04p21380 Brassica napus HOM05D001498 ORTHO05D013028 2.1e-16 89.7 174 40.8
C09p17600 Brassica napus HOM05D001498 ORTHO05D011506 2.1e-16 89.7 177 41.8
C02p52020 Brassica napus HOM05D001498 ORTHO05D011506 2.8e-16 89.4 177 41.8
C01p38680 Brassica napus HOM05D001498 ORTHO05D011506 3.7e-16 89.0 175 41.7
C08p17880 Brassica napus HOM05D001498 ORTHO05D001885 3.7e-16 89.0 162 42.6
BcaB05g22943 Brassica carinata HOM05D001498 ORTHO05D096110 4.8e-16 88.6 85 61.2
C01p44920 Brassica napus HOM05D001498 ORTHO05D011506 6.2e-16 88.2 174 41.4
C01p48970 Brassica napus HOM05D001498 ORTHO05D011506 8.2e-16 87.8 104 56.7
BcaB02g11279 Brassica carinata HOM05D001498 ORTHO05D095830 1.8e-15 86.7 94 52.1
BolC9t54653H Brassica oleracea HOM05D001498 ORTHO05D011506 2.4e-15 86.3 174 41.4
BolC1t03827H Brassica oleracea HOM05D001498 ORTHO05D011506 3.1e-15 85.9 154 42.2
BcaC02g09114 Brassica carinata HOM05D001498 ORTHO05D011506 4.0e-15 85.5 154 41.6
C03p56230 Brassica napus HOM05D001498 ORTHO05D001885 4.0e-15 85.5 172 40.7
C06p31050 Brassica napus HOM05D001498 ORTHO05D011506 4.0e-15 85.5 109 53.2
BcaC06g36329 Brassica carinata HOM05D001498 ORTHO05D096194 5.3e-15 85.1 110 48.2
C03p66370 Brassica napus HOM05D001498 ORTHO05D011506 5.3e-15 85.1 104 55.8
BcaB04g18314 Brassica carinata HOM05D001498 ORTHO05D095953 9.0e-15 84.3 82 58.5
BcaC07g38657 Brassica carinata HOM05D001498 ORTHO05D011506 9.0e-15 84.3 148 42.6
BolC3t17911H Brassica oleracea HOM05D001498 ORTHO05D008559 9.0e-15 84.3 173 41.0
BcaB05g23246 Brassica carinata HOM05D001498 ORTHO05D090900 1.2e-14 84.0 85 58.8
BolC9t57107H Brassica oleracea HOM05D001498 ORTHO05D016694 1.2e-14 84.0 82 58.5
BcaB05g23077 Brassica carinata HOM05D001498 ORTHO05D091436 1.5e-14 83.6 104 53.8
A08p09540 Brassica napus HOM05D001498 ORTHO05D011506 2.6e-14 82.8 167 41.3
C09p27470 Brassica napus HOM05D001498 ORTHO05D011506 2.6e-14 82.8 101 52.5
C09p42290 Brassica napus HOM05D001498 ORTHO05D016694 2.6e-14 82.8 82 58.5
BcaC08g44373 Brassica carinata HOM05D001498 ORTHO05D011506 3.4e-14 82.4 154 40.3
BcaB07g33315 Brassica carinata HOM05D001498 ORTHO05D091495 4.5e-14 82.0 104 51.9
C02p53500 Brassica napus HOM05D001498 ORTHO05D001885 4.5e-14 82.0 170 40.6
BcaC04g19551 Brassica carinata HOM05D001498 ORTHO05D090991 5.8e-14 81.6 72 63.9
BcaC05g27519 Brassica carinata HOM05D001498 ORTHO05D011506 7.6e-14 81.3 104 53.8
A03p54380 Brassica napus HOM05D001498 ORTHO05D011506 7.6e-14 81.3 173 40.5
BcaB08g35016 Brassica carinata HOM05D001498 ORTHO05D092631 1.3e-13 80.5 104 51.0
BcaC08g44056 Brassica carinata HOM05D001498 ORTHO05D091470 1.3e-13 80.5 135 45.2
BcaB07g32352 Brassica carinata HOM05D001498 ORTHO05D021639 2.2e-13 79.7 106 52.8
C01p30520 Brassica napus HOM05D001498 ORTHO05D001885 2.2e-13 79.7 103 52.4
BcaC09g50109 Brassica carinata HOM05D001498 ORTHO05D093510 2.9e-13 79.3 70 64.3
BolC3t19484H Brassica oleracea HOM05D001498 ORTHO05D011506 2.9e-13 79.3 147 41.5
BolC4t23616H Brassica oleracea HOM05D001498 ORTHO05D016694 2.9e-13 79.3 105 49.5
BcaB01g01185 Brassica carinata HOM05D001498 ORTHO05D019959 3.8e-13 79.0 85 51.8
BcaB07g33085 Brassica carinata HOM05D001498 ORTHO05D095625 3.8e-13 79.0 163 40.5
BcaC02g11068 Brassica carinata HOM05D001498 ORTHO05D016694 3.8e-13 79.0 105 49.5
BcaC06g35524 Brassica carinata HOM05D001498 ORTHO05D016694 3.8e-13 79.0 105 47.6
C04p20860 Brassica napus HOM05D001498 ORTHO05D016694 6.5e-13 78.2 105 49.5
BolC1t02817H Brassica oleracea HOM05D001498 ORTHO05D106172 6.5e-13 78.2 102 52.9
C09p21170 Brassica napus HOM05D001498 ORTHO05D011506 8.4e-13 77.8 172 39.5
BraA03t15290Z Brassica rapa HOM05D001498 ORTHO05D011506 1.1e-12 77.4 174 37.4
BcaB01g01309 Brassica carinata HOM05D001498 ORTHO05D091216 1.4e-12 77.0 147 47.6
BcaB01g01371 Brassica carinata HOM05D001498 ORTHO05D091381 1.4e-12 77.0 76 55.3
BcaC09g48967 Brassica carinata HOM05D001498 ORTHO05D011506 1.4e-12 77.0 100 53.0
A08p06060 Brassica napus HOM05D001498 ORTHO05D011506 1.4e-12 77.0 170 40.0
BcaB03g15933 Brassica carinata HOM05D001498 ORTHO05D021639 1.9e-12 76.6 106 50.9
BcaC04g20364 Brassica carinata HOM05D001498 ORTHO05D011506 2.5e-12 76.3 100 53.0
A01p28560 Brassica napus HOM05D001498 ORTHO05D021639 2.5e-12 76.3 73 63.0
BolC8t49067H Brassica oleracea HOM05D001498 ORTHO05D011506 2.5e-12 76.3 141 41.8
BolC9t55019H Brassica oleracea HOM05D001498 ORTHO05D011506 2.5e-12 76.3 172 39.0
BcaB07g33213 Brassica carinata HOM05D001498 ORTHO05D090837 4.2e-12 75.5 76 53.9
BcaC05g27663 Brassica carinata HOM05D001498 ORTHO05D090842 5.5e-12 75.1 77 54.5
C04p36710 Brassica napus HOM05D001498 ORTHO05D001885 5.5e-12 75.1 142 40.8
BcaB06g26483 Brassica carinata HOM05D001498 ORTHO05D095599 9.3e-12 74.3 104 49.0
BcaB06g27205 Brassica carinata HOM05D001498 ORTHO05D091204 1.6e-11 73.6 76 52.6
BcaC02g10287 Brassica carinata HOM05D001498 ORTHO05D093229 1.6e-11 73.6 103 50.5
C03p66000 Brassica napus HOM05D001498 ORTHO05D001885 2.1e-11 73.2 169 39.1
BcaB07g33754 Brassica carinata HOM05D001498 ORTHO05D092729 2.7e-11 72.8 69 59.4
BcaB02g11277 Brassica carinata HOM05D001498 ORTHO05D091891 4.6e-11 72.0 94 47.9
BcaB05g22880 Brassica carinata HOM05D001498 ORTHO05D019959 4.6e-11 72.0 92 48.9
BolC8t47367H Brassica oleracea HOM05D001498 ORTHO05D011506 6.1e-11 71.6 147 38.8
BcaB08g35076 Brassica carinata HOM05D001498 ORTHO05D021639 1.0e-10 70.9 97 52.6
BcaB04g17703 Brassica carinata HOM05D001498 ORTHO05D021639 1.3e-10 70.5 100 48.0
BcaB02g10765 Brassica carinata HOM05D001498 ORTHO05D095468 1.8e-10 70.1 95 49.5
C05p25290 Brassica napus HOM05D001498 ORTHO05D019959 1.8e-10 70.1 82 53.7
BcaB02g11218 Brassica carinata HOM05D001224 ORTHO05D010571 3.9e-10 68.9 92 45.7
BcaB06g25736 Brassica carinata HOM05D001498 ORTHO05D021639 3.9e-10 68.9 93 52.7
BcaB06g25739 Brassica carinata HOM05D001498 ORTHO05D093323 3.9e-10 68.9 97 51.5
BcaB06g26755 Brassica carinata HOM05D001498 ORTHO05D092466 3.9e-10 68.9 97 51.5
BcaC05g25872 Brassica carinata HOM05D001498 ORTHO05D011506 3.9e-10 68.9 171 36.3
BcaB04g18432 Brassica carinata HOM05D001498 ORTHO05D090882 6.7e-10 68.2 97 51.5
BcaC04g20545 Brassica carinata HOM05D001498 ORTHO05D016694 8.7e-10 67.8 96 47.9
BcaB08g35461 Brassica carinata HOM05D001498 ORTHO05D090491 1.5e-09 67.0 85 51.8
BcaC03g13777 Brassica carinata HOM05D001498 ORTHO05D091916 1.9e-09 66.6 85 49.4
C07p06210 Brassica napus HOM05D001498 ORTHO05D032253 1.9e-09 66.6 77 53.2
BcaB03g16298 Brassica carinata HOM05D001498 ORTHO05D095831 2.5e-09 66.2 108 44.4
BolC7t41038H Brassica oleracea HOM05D001498 ORTHO05D032253 2.5e-09 66.2 77 53.2
BcaB07g33140 Brassica carinata HOM05D015118 ORTHO05D019993 4.3e-09 65.5 152 35.5
BcaB03g16194 Brassica carinata HOM05D001498 ORTHO05D091006 5.7e-09 65.1 119 43.7
C04p09850 Brassica napus HOM05D001498 ORTHO05D101798 1.6e-08 63.5 53 60.4
BcaB02g11227 Brassica carinata HOM05D001498 ORTHO05D093168 2.2e-08 63.2 44 77.3
BcaC06g36230 Brassica carinata HOM05D001498 ORTHO05D032253 2.2e-08 63.2 71 54.9
BcaB03g16497 Brassica carinata HOM05D001498 ORTHO05D008559 2.8e-08 62.8 117 45.3
BcaC04g20544 Brassica carinata HOM05D001498 ORTHO05D016694 3.7e-08 62.4 62 59.7
BcaB04g17490 Brassica carinata HOM05D001498 ORTHO05D019959 8.2e-08 61.2 73 46.6
BcaB06g26473 Brassica carinata HOM05D001498 ORTHO05D091656 3.1e-07 59.3 76 53.9
BolC7t40930H Brassica oleracea HOM05D001379 ORTHO05D016694 4.1e-07 58.9 80 46.2
BcaB05g24509 Brassica carinata HOM05D001379 ORTHO05D001277 5.3e-07 58.5 64 51.6
BcaC01g03078 Brassica carinata HOM05D001498 ORTHO05D008559 5.3e-07 58.5 150 40.7
BcaC02g09776 Brassica carinata HOM05D001498 ORTHO05D016036 5.3e-07 58.5 112 41.1
C04p18080 Brassica napus HOM05D015118 ORTHO05D019993 6.9e-07 58.2 160 35.0
BolC4t23356H Brassica oleracea HOM05D015118 ORTHO05D019993 6.9e-07 58.2 160 35.0
BcaB06g26478 Brassica carinata HOM05D001498 ORTHO05D092859 2.0e-06 56.6 68 58.8
BcaB06g27027 Brassica carinata HOM05D001498 ORTHO05D092574 2.0e-06 56.6 68 57.4
BcaC04g22591 Brassica carinata HOM05D001498 ORTHO05D095898 4.5e-06 55.5 73 53.4
BcaC03g14315 Brassica carinata HOM05D001498 ORTHO05D008559 5.9e-06 55.1 102 42.2


User provided reference genes

Program Settings