Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g26688 Brassica carinata HOM05D009886 ORTHO05D006977 1.4e-78 296.2 152 100.0
BcaB04g18053 Brassica carinata HOM05D009886 ORTHO05D093091 2.7e-32 142.5 86 87.2
BcaB05g23013 Brassica carinata HOM05D000471 ORTHO05D013512 6.5e-31 137.9 86 86.0
BcaC06g34265 Brassica carinata HOM05D009886 ORTHO05D011627 1.1e-14 84.0 78 62.8
BcaB08g35088 Brassica carinata HOM05D009886 ORTHO05D009533 1.9e-14 83.2 63 77.8
BcaC09g49061 Brassica carinata HOM05D009886 ORTHO05D011627 5.6e-14 81.6 78 62.8
A01p23060 Brassica napus HOM05D005860 ORTHO05D006977 6.1e-13 78.2 52 78.8
BraA01t02219Z Brassica rapa HOM05D005860 ORTHO05D006977 6.1e-13 78.2 52 78.8
BcaC09g50132 Brassica carinata HOM05D005860 ORTHO05D006977 1.0e-12 77.4 52 76.9
C01p28690 Brassica napus HOM05D005860 ORTHO05D006977 1.0e-12 77.4 52 76.9
BolC1t02795H Brassica oleracea HOM05D005860 ORTHO05D006977 1.0e-12 77.4 52 76.9
Sp7g12700 Schrenkiella parvula HOM05D005860 ORTHO05D006977 1.8e-12 76.6 59 69.5
BcaB01g05258 Brassica carinata HOM05D009886 ORTHO05D091658 2.3e-12 76.3 127 43.3
BcaB05g23825 Brassica carinata HOM05D009886 ORTHO05D011627 2.3e-12 76.3 90 60.0
BcaB07g32885 Brassica carinata HOM05D008116 ORTHO05D092418 4.0e-12 75.5 72 68.1
BcaB06g26859 Brassica carinata HOM05D009886 ORTHO05D011627 5.2e-12 75.1 70 71.4
AL7G41520 Arabidopsis lyrata HOM05D005860 ORTHO05D006977 6.8e-12 74.7 59 69.5
BcaNung00353 Brassica carinata HOM05D005860 ORTHO05D006977 6.8e-12 74.7 60 70.0
BcaC01g01795 Brassica carinata HOM05D009886 ORTHO05D093830 8.9e-12 74.3 71 63.4
Carub.0007s2760 Capsella rubella HOM05D005860 ORTHO05D006977 8.9e-12 74.3 59 67.8
AT4G14605 Arabidopsis thaliana HOM05D005860 ORTHO05D006977 1.2e-11 73.9 59 66.1
CARHR220830 Cardamine hirsuta HOM05D005860 ORTHO05D006977 1.2e-11 73.9 59 67.8
Thhalv10025001m.g Eutrema salsugineum HOM05D005860 ORTHO05D006977 1.2e-11 73.9 59 67.8
BcaB01g02190 Brassica carinata HOM05D009886 ORTHO05D011627 1.5e-11 73.6 69 72.5
BcaB01g01747 Brassica carinata HOM05D009886 ORTHO05D011627 3.4e-11 72.4 71 71.8
BcaC02g10020 Brassica carinata HOM05D002478 ORTHO05D003331 2.9e-10 69.3 71 62.0
BcaB05g24315 Brassica carinata HOM05D010929 ORTHO05D011627 6.4e-10 68.2 71 69.0
BcaC07g37235 Brassica carinata HOM05D009142 ORTHO05D090351 1.1e-09 67.4 65 63.1
BcaB06g27413 Brassica carinata HOM05D000803 ORTHO05D011944 1.4e-09 67.0 61 72.1
BcaC09g49100 Brassica carinata HOM05D009886 ORTHO05D094675 1.8e-09 66.6 71 60.6
BcaC07g37585 Brassica carinata HOM05D009886 ORTHO05D092155 1.2e-08 63.9 72 56.9
BcaB05g22085 Brassica carinata HOM05D009886 ORTHO05D094811 2.7e-08 62.8 78 53.8
BcaB05g23449 Brassica carinata HOM05D009886 ORTHO05D092337 4.6e-08 62.0 52 73.1
BcaC03g16790 Brassica carinata HOM05D009886 ORTHO05D095683 4.6e-08 62.0 72 54.2
BcaNung03562 Brassica carinata HOM05D009886 ORTHO05D011627 1.0e-07 60.8 56 73.2
Aa31LG9G2730 Aethionema arabicum HOM05D005860 ORTHO05D006977 2.3e-07 59.7 59 54.2
BcaB02g06456 Brassica carinata HOM05D009886 ORTHO05D011627 2.3e-07 59.7 71 62.0
BcaC04g20227 Brassica carinata HOM05D009886 ORTHO05D092077 5.0e-07 58.5 78 51.3
BcaC05g27142 Brassica carinata HOM05D009886 ORTHO05D091445 5.0e-07 58.5 62 59.7
Gohir.D10G072200 Gossypium hirsutum HOM05D005860 ORTHO05D006977 6.6e-07 58.2 76 47.4
Gorai.011G077700 Gossypium raimondii HOM05D005860 ORTHO05D006977 6.6e-07 58.2 76 47.4
Dinv19535 Davidia involucrata HOM05D005860 ORTHO05D006977 1.9e-06 56.6 46 60.9
Actinidia30891 Actinidia chinensis HOM05D005860 ORTHO05D006977 2.5e-06 56.2 50 60.0
Manes.15G158200 Manihot esculenta HOM05D005860 ORTHO05D006977 2.5e-06 56.2 46 60.9
CiPaw.04G034700 Carya illinoinensis HOM05D005860 ORTHO05D006977 3.3e-06 55.8 46 63.0
QL02p072028 Quercus lobata HOM05D005860 ORTHO05D006977 4.3e-06 55.5 43 67.4
Gohir.A10G079300 Gossypium hirsutum HOM05D005860 ORTHO05D006977 5.6e-06 55.1 76 46.1
Thecc.08G160800 Theobroma cacao HOM05D005860 ORTHO05D006977 5.6e-06 55.1 46 60.9
TAR622G0256 Trochodendron aralioides HOM05D005860 ORTHO05D006977 7.3e-06 54.7 45 62.2
GSVIVG01001819001 Vitis vinifera HOM05D005860 ORTHO05D006977 7.3e-06 54.7 45 62.2


User provided reference genes

Program Settings