Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g26684 Brassica carinata HOM05D001224 ORTHO05D010571 4.8e-296 1020.4 509 100.0
BcaB05g24682 Brassica carinata HOM05D001224 ORTHO05D016074 1.7e-115 420.6 577 49.2
BcaB06g26645 Brassica carinata HOM05D001224 ORTHO05D010571 5.6e-111 405.6 386 61.7
BcaB04g17704 Brassica carinata HOM05D001224 ORTHO05D096088 2.1e-81 307.4 285 63.2
BcaB06g25737 Brassica carinata HOM05D001224 ORTHO05D016074 7.5e-55 219.2 348 46.3
BcaB02g11183 Brassica carinata HOM05D001224 ORTHO05D016074 7.2e-50 202.6 380 42.6
BcaB05g22948 Brassica carinata HOM05D001224 ORTHO05D010571 5.2e-48 196.4 266 49.2
BcaB04g16977 Brassica carinata HOM05D001224 ORTHO05D010571 1.8e-45 188.0 366 38.3
BcaB04g17600 Brassica carinata HOM05D001224 ORTHO05D093893 1.6e-44 184.9 410 41.5
BcaB06g27850 Brassica carinata HOM05D001224 ORTHO05D016074 4.4e-39 166.8 94 94.7
BolC9t59175H Brassica oleracea HOM05D001224 ORTHO05D042117 7.5e-31 139.4 326 36.5
BcaB01g01183 Brassica carinata HOM05D001224 ORTHO05D019989 5.4e-29 133.3 330 33.3
BcaB06g27849 Brassica carinata HOM05D001224 ORTHO05D091028 7.0e-29 132.9 119 61.3
C05p18370 Brassica napus HOM05D001224 ORTHO05D042117 1.0e-27 129.0 321 35.8
BcaB06g26475 Brassica carinata HOM05D001224 ORTHO05D093826 2.5e-26 124.4 109 72.5
BcaB02g11218 Brassica carinata HOM05D001224 ORTHO05D010571 1.2e-25 122.1 408 31.9
BcaB04g17485 Brassica carinata HOM05D001224 ORTHO05D019989 4.4e-23 113.6 284 35.9
BcaB07g33214 Brassica carinata HOM05D001224 ORTHO05D018563 9.8e-23 112.5 216 34.3
BcaB01g01374 Brassica carinata HOM05D001224 ORTHO05D018563 1.3e-22 112.1 298 31.2
BcaB06g27136 Brassica carinata HOM05D001224 ORTHO05D094773 1.9e-21 108.2 90 73.3
BcaB05g24223 Brassica carinata HOM05D001224 ORTHO05D019989 2.4e-21 107.8 443 28.4
BcaB03g16206 Brassica carinata HOM05D001224 ORTHO05D010571 4.6e-20 103.6 374 29.1
C07p00680 Brassica napus HOM05D001224 ORTHO05D003542 1.7e-19 101.7 294 34.7
BcaB06g27207 Brassica carinata HOM05D001224 ORTHO05D019989 2.3e-19 101.3 257 34.6
BcaC01g02927 Brassica carinata HOM05D001224 ORTHO05D014478 3.9e-19 100.5 396 28.5
A10p08880 Brassica napus HOM05D001224 ORTHO05D010571 5.1e-19 100.1 437 27.5
BcaC05g28451 Brassica carinata HOM05D001224 ORTHO05D014478 4.3e-18 97.1 397 28.2
BcaB01g02584 Brassica carinata HOM05D001224 ORTHO05D019989 9.5e-18 95.9 116 50.9
BcaB03g16627 Brassica carinata HOM05D001224 ORTHO05D018563 1.6e-17 95.1 278 32.7
BcaB06g27848 Brassica carinata HOM05D001224 ORTHO05D094661 2.8e-17 94.4 371 31.0
BcaC08g43834 Brassica carinata HOM05D001224 ORTHO05D014478 3.6e-17 94.0 410 28.3
BcaC06g36171 Brassica carinata HOM05D001224 ORTHO05D014478 8.1e-17 92.8 420 26.7
BcaB06g26650 Brassica carinata HOM05D001224 ORTHO05D010571 1.1e-16 92.4 87 54.0
BcaC02g09920 Brassica carinata HOM05D001224 ORTHO05D014478 1.4e-16 92.0 295 31.5
BcaB04g17772 Brassica carinata HOM05D001224 ORTHO05D010571 6.8e-16 89.7 353 30.0
BcaB05g22878 Brassica carinata HOM05D001224 ORTHO05D018563 6.8e-16 89.7 239 33.9
C05p36130 Brassica napus HOM05D001224 ORTHO05D010571 6.8e-16 89.7 253 35.2
BcaB06g26507 Brassica carinata HOM05D001224 ORTHO05D010571 8.9e-16 89.4 173 43.9
C01p48020 Brassica napus HOM05D001224 ORTHO05D010571 8.9e-16 89.4 258 35.3
BcaC02g09037 Brassica carinata HOM05D001224 ORTHO05D014478 1.5e-15 88.6 422 27.7
C07p12920 Brassica napus HOM05D001224 ORTHO05D016739 5.8e-15 86.7 261 32.2
BcaC06g36017 Brassica carinata HOM05D001224 ORTHO05D016739 2.2e-14 84.7 214 35.5
BcaC07g37040 Brassica carinata HOM05D001224 ORTHO05D010571 3.7e-14 84.0 453 26.9
BcaB03g15932 Brassica carinata HOM05D001224 ORTHO05D092529 4.9e-14 83.6 193 36.3
C01p45400 Brassica napus HOM05D001224 ORTHO05D010571 4.9e-14 83.6 249 33.3
BolC8t47204H Brassica oleracea HOM05D001224 ORTHO05D010571 6.4e-14 83.2 238 33.2
BcaB06g26317 Brassica carinata HOM05D001224 ORTHO05D010571 8.3e-14 82.8 154 40.9
BcaC05g28169 Brassica carinata HOM05D001224 ORTHO05D003044 2.4e-13 81.3 278 30.6
BcaB04g17609 Brassica carinata HOM05D001224 ORTHO05D019989 3.2e-13 80.9 134 41.0
C03p58300 Brassica napus HOM05D001224 ORTHO05D010571 1.2e-12 79.0 234 34.2
BcaB07g32768 Brassica carinata HOM05D001224 ORTHO05D090509 2.1e-12 78.2 209 33.5
C07p08920 Brassica napus HOM05D001224 ORTHO05D010571 6.0e-12 76.6 243 33.7
BcaC05g27783 Brassica carinata HOM05D001224 ORTHO05D000395 1.0e-11 75.9 74 45.9
C07p01220 Brassica napus HOM05D001224 ORTHO05D010571 3.9e-11 73.9 253 32.4
BcaC05g27135 Brassica carinata HOM05D001224 ORTHO05D010571 5.1e-11 73.6 64 48.4
C07p08900 Brassica napus HOM05D001224 ORTHO05D016739 6.6e-11 73.2 294 28.9
BolC8t49589H Brassica oleracea HOM05D001224 ORTHO05D010571 8.6e-11 72.8 260 31.9
BcaB04g17593 Brassica carinata HOM05D001224 ORTHO05D091055 1.1e-10 72.4 211 27.5
BcaB08g35070 Brassica carinata HOM05D001224 ORTHO05D010571 1.5e-10 72.0 242 31.4
BolC6t35441H Brassica oleracea HOM05D001224 ORTHO05D003542 1.5e-10 72.0 72 47.2
BcaC01g02361 Brassica carinata HOM05D001224 ORTHO05D016739 1.9e-10 71.6 99 43.4
C05p36970 Brassica napus HOM05D001224 ORTHO05D024276 1.9e-10 71.6 219 27.4
BolC7t41304H Brassica oleracea HOM05D001224 ORTHO05D016739 1.9e-10 71.6 293 28.7
BcaB01g02585 Brassica carinata HOM05D001224 ORTHO05D000395 2.5e-10 71.2 223 28.7
BraA07t28368Z Brassica rapa HOM05D001224 ORTHO05D003542 4.3e-10 70.5 89 48.3
BcaC06g35526 Brassica carinata HOM05D002776 ORTHO05D012331 5.6e-10 70.1 351 24.8
BcaB04g18434 Brassica carinata HOM05D001224 ORTHO05D090692 7.3e-10 69.7 98 45.9
BcaC02g11120 Brassica carinata HOM05D001224 ORTHO05D010571 7.3e-10 69.7 425 25.6
BcaC06g35068 Brassica carinata HOM05D002776 ORTHO05D012331 7.3e-10 69.7 348 26.7
C05p27310 Brassica napus HOM05D001224 ORTHO05D010571 7.3e-10 69.7 275 30.2
C06p26600 Brassica napus HOM05D001224 ORTHO05D014478 7.3e-10 69.7 248 31.9
BcaB02g11186 Brassica carinata HOM05D001224 ORTHO05D092062 9.6e-10 69.3 87 47.1
BraA01t02476Z Brassica rapa HOM05D001224 ORTHO05D003542 1.2e-09 68.9 84 47.6
BcaC06g35617 Brassica carinata HOM05D001224 ORTHO05D016739 2.8e-09 67.8 254 28.0
BcaB04g18242 Brassica carinata HOM05D001224 ORTHO05D010571 3.6e-09 67.4 204 31.4
BcaC05g27630 Brassica carinata HOM05D001224 ORTHO05D001170 3.6e-09 67.4 210 33.8
A08p08810 Brassica napus HOM05D001224 ORTHO05D010571 6.2e-09 66.6 252 31.7
BcaB06g26680 Brassica carinata HOM05D001224 ORTHO05D018563 8.1e-09 66.2 61 50.8
BcaB07g33938 Brassica carinata HOM05D001224 ORTHO05D019989 1.1e-08 65.9 77 50.6
BcaC06g36430 Brassica carinata HOM05D001224 ORTHO05D039145 1.1e-08 65.9 283 27.2
C01p38730 Brassica napus HOM05D001224 ORTHO05D012331 1.1e-08 65.9 333 24.9
BolC3t19180H Brassica oleracea HOM05D001224 ORTHO05D042758 1.1e-08 65.9 149 32.9
BolC5t31444H Brassica oleracea HOM05D001224 ORTHO05D003044 1.1e-08 65.9 90 46.7
BolC5t33261H Brassica oleracea HOM05D001224 ORTHO05D014478 1.4e-08 65.5 89 46.1
BcaC02g12294 Brassica carinata HOM05D001224 ORTHO05D014478 1.8e-08 65.1 373 25.2
C04p05530 Brassica napus HOM05D001224 ORTHO05D010571 1.8e-08 65.1 259 31.7
C07p04250 Brassica napus HOM05D001224 ORTHO05D039145 1.8e-08 65.1 105 38.1
BolC5t30546H Brassica oleracea HOM05D001224 ORTHO05D010571 1.8e-08 65.1 252 31.3
BolC6t35536H Brassica oleracea HOM05D000675 ORTHO05D000395 1.8e-08 65.1 107 39.3
BolC9t57112H Brassica oleracea HOM05D001224 ORTHO05D012331 1.8e-08 65.1 306 26.5
BolC6t36715H Brassica oleracea HOM05D001224 ORTHO05D024547 2.4e-08 64.7 93 45.2
BcaB06g27137 Brassica carinata HOM05D001224 ORTHO05D094047 3.1e-08 64.3 107 43.0
BolC3t19387H Brassica oleracea HOM05D001224 ORTHO05D016111 3.1e-08 64.3 292 29.5
BcaB04g18021 Brassica carinata HOM05D001224 ORTHO05D092713 4.0e-08 63.9 89 44.9
BolC4t22590H Brassica oleracea HOM05D002776 ORTHO05D016111 4.0e-08 63.9 66 45.5
C01p41550 Brassica napus HOM05D001224 ORTHO05D010571 8.9e-08 62.8 251 30.7
C05p37780 Brassica napus HOM05D001224 ORTHO05D010571 8.9e-08 62.8 259 31.7
C07p13910 Brassica napus HOM05D001224 ORTHO05D012331 8.9e-08 62.8 322 24.2
BolC1t03176H Brassica oleracea HOM05D001224 ORTHO05D010571 2.0e-07 61.6 190 34.2
BolC4t26388H Brassica oleracea HOM05D001224 ORTHO05D000395 2.6e-07 61.2 101 34.7
BolC5t32442H Brassica oleracea HOM05D001224 ORTHO05D024276 2.6e-07 61.2 197 27.4
C07p01190 Brassica napus HOM05D001224 ORTHO05D000395 3.4e-07 60.8 101 33.7
BcaC07g37923 Brassica carinata HOM05D001224 ORTHO05D016739 5.8e-07 60.1 115 35.7
BolC4t23819H Brassica oleracea HOM05D002776 ORTHO05D000395 1.3e-06 58.9 64 39.1
BcaB06g25741 Brassica carinata HOM05D001224 ORTHO05D016074 1.7e-06 58.5 44 63.6
BcaB02g10769 Brassica carinata HOM05D002776 ORTHO05D012331 2.9e-06 57.8 351 25.6
BcaC03g17086 Brassica carinata HOM05D001224 ORTHO05D010571 3.8e-06 57.4 219 30.6
BraSC37t46113Z Brassica rapa HOM05D000675 ORTHO05D000395 3.8e-06 57.4 163 25.8
BcaB04g18801 Brassica carinata HOM05D001224 ORTHO05D093562 8.4e-06 56.2 145 40.7


User provided reference genes

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