Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g26639 Brassica carinata HOM05D000977 ORTHO05D001094 5.9e-105 384.4 224 100.0
BcaB06g26642 Brassica carinata HOM05D000977 ORTHO05D001094 4.1e-98 361.7 215 99.1
BcaB06g29622 Brassica carinata HOM05D000977 ORTHO05D001094 1.8e-69 266.5 184 90.8
BcaC08g44296 Brassica carinata HOM05D000977 ORTHO05D001094 1.8e-45 186.8 179 65.9
BcaC08g44528 Brassica carinata HOM05D000977 ORTHO05D001094 3.8e-43 179.1 178 63.5
BolC9t55670H Brassica oleracea HOM05D000977 ORTHO05D001094 1.4e-42 177.2 175 62.9
BcaC01g00057 Brassica carinata HOM05D000977 ORTHO05D001094 1.0e-40 171.0 179 56.4
BolC2t11220H Brassica oleracea HOM05D000977 ORTHO05D001094 4.3e-39 165.6 177 65.5
BcaB01g03292 Brassica carinata HOM05D000977 ORTHO05D001094 3.6e-38 162.5 332 35.8
BcaC06g35604 Brassica carinata HOM05D000977 ORTHO05D001094 3.6e-38 162.5 306 44.8
BolC5t33624H Brassica oleracea HOM05D000977 ORTHO05D001094 4.8e-38 162.2 177 59.3
BcaC03g17204 Brassica carinata HOM05D000977 ORTHO05D001094 8.1e-38 161.4 143 67.8
BcaB04g17253 Brassica carinata HOM05D000977 ORTHO05D001094 2.4e-37 159.8 166 54.8
BcaC05g27458 Brassica carinata HOM05D000977 ORTHO05D001094 4.0e-37 159.1 174 59.2
BcaC05g27350 Brassica carinata HOM05D000977 ORTHO05D001094 5.3e-37 158.7 180 56.1
BcaC09g50525 Brassica carinata HOM05D000977 ORTHO05D001094 6.9e-37 158.3 179 58.1
BcaC05g29030 Brassica carinata HOM05D000977 ORTHO05D001094 9.0e-37 157.9 177 53.7
BcaB03g14367 Brassica carinata HOM05D000977 ORTHO05D001094 7.6e-36 154.8 181 60.2
BcaB04g18310 Brassica carinata HOM05D000977 ORTHO05D001094 1.7e-35 153.7 176 51.7
BcaC09g49808 Brassica carinata HOM05D000977 ORTHO05D001094 4.9e-35 152.1 191 60.2
BcaC04g21749 Brassica carinata HOM05D000977 ORTHO05D001094 4.2e-34 149.1 176 62.5
BcaB08g35729 Brassica carinata HOM05D000977 ORTHO05D001094 3.5e-33 146.0 166 52.4
BcaC07g36913 Brassica carinata HOM05D000977 ORTHO05D001094 3.5e-33 146.0 146 57.5
BcaC09g50384 Brassica carinata HOM05D000977 ORTHO05D001094 7.9e-33 144.8 111 71.2
BcaB07g33073 Brassica carinata HOM05D000977 ORTHO05D001094 8.7e-32 141.4 122 65.6
BcaB05g22218 Brassica carinata HOM05D000977 ORTHO05D001094 7.4e-31 138.3 122 64.8
BcaB05g21894 Brassica carinata HOM05D000977 ORTHO05D001094 4.8e-30 135.6 122 63.1
BcaB07g32894 Brassica carinata HOM05D000977 ORTHO05D001094 6.2e-30 135.2 181 53.6
BcaB01g02120 Brassica carinata HOM05D000977 ORTHO05D001094 8.1e-30 134.8 160 58.1
BcaB08g35649 Brassica carinata HOM05D000977 ORTHO05D001094 2.4e-29 133.3 177 51.4
BcaC06g35365 Brassica carinata HOM05D000977 ORTHO05D001094 4.0e-29 132.5 182 53.8
BcaC02g12311 Brassica carinata HOM05D000977 ORTHO05D001094 6.9e-29 131.7 95 71.6
BcaC09g51272 Brassica carinata HOM05D000977 ORTHO05D001094 6.9e-29 131.7 130 57.7
BcaC03g16219 Brassica carinata HOM05D000977 ORTHO05D001094 1.2e-28 131.0 143 53.1
BcaC05g28779 Brassica carinata HOM05D000977 ORTHO05D001094 4.5e-28 129.0 174 53.4
BcaC02g09848 Brassica carinata HOM05D000977 ORTHO05D001094 2.9e-27 126.3 112 61.6
BcaC02g10149 Brassica carinata HOM05D000977 ORTHO05D001094 8.4e-27 124.8 89 71.9
BolC9t57660H Brassica oleracea HOM05D000977 ORTHO05D001094 1.1e-26 124.4 89 71.9
BcaC02g10227 Brassica carinata HOM05D000977 ORTHO05D001094 1.2e-25 120.9 91 69.2
BcaC06g34453 Brassica carinata HOM05D000977 ORTHO05D001094 1.5e-23 114.0 92 66.3
BolC1t02514H Brassica oleracea HOM05D000977 ORTHO05D001094 2.2e-19 100.1 115 49.6
BcaB05g22284 Brassica carinata HOM05D000977 ORTHO05D001094 2.5e-18 96.7 96 54.2
BcaC04g22236 Brassica carinata HOM05D000977 ORTHO05D001094 1.6e-17 94.0 174 44.8
BcaB03g15222 Brassica carinata HOM05D000977 ORTHO05D001094 7.9e-17 91.7 132 41.7
C03p78210 Brassica napus HOM05D000977 ORTHO05D001094 5.1e-16 89.0 100 50.0
BolC8t48388H Brassica oleracea HOM05D000977 ORTHO05D001094 1.9e-15 87.0 80 53.8
BcaC06g36215 Brassica carinata HOM05D000977 ORTHO05D001094 5.7e-15 85.5 89 55.1
BcaC05g26254 Brassica carinata HOM05D000977 ORTHO05D001094 8.2e-14 81.6 108 54.6
BcaB05g24163 Brassica carinata HOM05D000977 ORTHO05D002086 2.6e-12 76.6 104 46.2
BcaC06g35928 Brassica carinata HOM05D000977 ORTHO05D001094 2.6e-12 76.6 87 55.2
BolC7t41395H Brassica oleracea HOM05D000977 ORTHO05D001094 2.6e-12 76.6 87 55.2
BcaC05g28256 Brassica carinata HOM05D000977 ORTHO05D001094 7.7e-12 75.1 77 53.2
BcaB06g26489 Brassica carinata HOM05D000977 ORTHO05D002086 2.9e-11 73.2 54 70.4
BcaC04g20081 Brassica carinata HOM05D000977 ORTHO05D001094 1.4e-10 70.9 54 66.7
BcaC09g49945 Brassica carinata HOM05D000977 ORTHO05D013023 1.4e-10 70.9 199 28.6
BcaC05g26250 Brassica carinata HOM05D000977 ORTHO05D001094 1.9e-10 70.5 65 56.9
BcaC08g44361 Brassica carinata HOM05D000977 ORTHO05D001094 4.2e-10 69.3 128 37.5
BcaC08g44363 Brassica carinata HOM05D000977 ORTHO05D001094 4.2e-10 69.3 128 37.5
BcaB07g33902 Brassica carinata HOM05D000977 ORTHO05D008837 1.2e-09 67.8 109 36.7
BcaC01g00497 Brassica carinata HOM05D000977 ORTHO05D001094 2.1e-09 67.0 114 41.2
BcaC06g33214 Brassica carinata HOM05D000977 ORTHO05D001094 2.1e-09 67.0 114 41.2
BcaC08g46178 Brassica carinata HOM05D000977 ORTHO05D001094 2.1e-09 67.0 118 40.7
BcaC05g27245 Brassica carinata HOM05D000977 ORTHO05D001094 3.6e-09 66.2 114 36.8
BolC7t41798H Brassica oleracea HOM05D000977 ORTHO05D001094 3.6e-09 66.2 33 87.9
BolC6t36479H Brassica oleracea HOM05D000977 ORTHO05D001094 6.1e-09 65.5 33 87.9
BcaC05g25704 Brassica carinata HOM05D000977 ORTHO05D001094 1.4e-08 64.3 118 35.6
BcaB01g02452 Brassica carinata HOM05D000977 ORTHO05D001094 1.8e-08 63.9 104 36.5
BolC2t12078H Brassica oleracea HOM05D000977 ORTHO05D032779 1.8e-08 63.9 33 84.8
BcaC03g14983 Brassica carinata HOM05D000977 ORTHO05D001094 2.3e-08 63.5 118 35.6
BcaC06g34451 Brassica carinata HOM05D000977 ORTHO05D001094 2.3e-08 63.5 33 84.8
C02p60230 Brassica napus HOM05D000977 ORTHO05D001094 2.3e-08 63.5 33 84.8
BolC1t04630H Brassica oleracea HOM05D000977 ORTHO05D001094 2.3e-08 63.5 31 90.3
BcaC05g28482 Brassica carinata HOM05D000977 ORTHO05D001094 3.0e-08 63.2 118 33.1
BcaC07g37597 Brassica carinata HOM05D000977 ORTHO05D001094 3.0e-08 63.2 118 34.7
BcaC08g44209 Brassica carinata HOM05D000977 ORTHO05D001094 3.0e-08 63.2 118 39.0
BcaC03g16857 Brassica carinata HOM05D000977 ORTHO05D001094 3.9e-08 62.8 84 44.0
BcaC05g25745 Brassica carinata HOM05D000977 ORTHO05D001094 3.9e-08 62.8 85 47.1
BcaC09g48826 Brassica carinata HOM05D000977 ORTHO05D001094 3.9e-08 62.8 126 34.9
BraA10t43803Z Brassica rapa HOM05D000977 ORTHO05D001094 3.9e-08 62.8 58 55.2
BcaC01g00939 Brassica carinata HOM05D000977 ORTHO05D001094 5.1e-08 62.4 118 33.9
BcaC06g33769 Brassica carinata HOM05D000977 ORTHO05D001094 6.7e-08 62.0 118 34.7
BcaC05g27597 Brassica carinata HOM05D000977 ORTHO05D001094 8.8e-08 61.6 117 35.9
A05p16280 Brassica napus HOM05D000977 ORTHO05D001094 8.8e-08 61.6 117 32.5
C06p02270 Brassica napus HOM05D000977 ORTHO05D001094 8.8e-08 61.6 117 32.5
BolC8t47282H Brassica oleracea HOM05D000977 ORTHO05D001094 8.8e-08 61.6 117 32.5
BcaB04g17837 Brassica carinata HOM05D000977 ORTHO05D001094 1.1e-07 61.2 33 78.8
BcaC06g35798 Brassica carinata HOM05D000977 ORTHO05D001094 1.1e-07 61.2 33 81.8
C07p10720 Brassica napus HOM05D000977 ORTHO05D001094 1.1e-07 61.2 33 81.8
BolC1t04517H Brassica oleracea HOM05D000977 ORTHO05D001094 1.1e-07 61.2 121 36.4
BolC7t41538H Brassica oleracea HOM05D000977 ORTHO05D001094 1.1e-07 61.2 33 81.8
BolC9t55635H Brassica oleracea HOM05D000977 ORTHO05D001094 1.1e-07 61.2 117 31.6
BcaB03g16512 Brassica carinata HOM05D000977 ORTHO05D001094 1.5e-07 60.8 33 81.8
BcaC02g11403 Brassica carinata HOM05D000977 ORTHO05D001094 1.5e-07 60.8 33 84.8
BcaC09g48981 Brassica carinata HOM05D000977 ORTHO05D001094 1.5e-07 60.8 118 33.1
A06p02270 Brassica napus HOM05D000977 ORTHO05D001094 1.5e-07 60.8 117 32.5
BcaB01g02646 Brassica carinata HOM05D000977 ORTHO05D001094 2.0e-07 60.5 33 78.8
BcaC08g43369 Brassica carinata HOM05D000977 ORTHO05D001094 2.0e-07 60.5 117 32.5
C06p07370 Brassica napus HOM05D000977 ORTHO05D001094 2.0e-07 60.5 117 32.5
BolC9t55864H Brassica oleracea HOM05D000977 ORTHO05D001094 2.0e-07 60.5 34 79.4
C06p04170 Brassica napus HOM05D000977 ORTHO05D001094 2.6e-07 60.1 60 55.0
BcaC01g01920 Brassica carinata HOM05D000977 ORTHO05D001094 3.3e-07 59.7 123 31.7
BcaC02g09936 Brassica carinata HOM05D000977 ORTHO05D001094 3.3e-07 59.7 33 78.8
BcaC04g22378 Brassica carinata HOM05D000977 ORTHO05D001094 3.3e-07 59.7 33 78.8
BcaC04g23591 Brassica carinata HOM05D000977 ORTHO05D001094 3.3e-07 59.7 33 78.8
C02p08890 Brassica napus HOM05D000977 ORTHO05D001094 3.3e-07 59.7 33 78.8
BolC3t19702H Brassica oleracea HOM05D000977 ORTHO05D001094 3.3e-07 59.7 58 51.7
BolC4t23780H Brassica oleracea HOM05D000977 ORTHO05D001094 3.3e-07 59.7 33 78.8
BolC8t47821H Brassica oleracea HOM05D000977 ORTHO05D001094 3.3e-07 59.7 125 32.0
CARHR254760 Cardamine hirsuta HOM05D000977 ORTHO05D001094 3.3e-07 59.7 112 33.0
BcaC04g20474 Brassica carinata HOM05D000977 ORTHO05D001094 4.4e-07 59.3 33 78.8
BcaC08g43667 Brassica carinata HOM05D000977 ORTHO05D001094 4.4e-07 59.3 33 78.8
C06p10910 Brassica napus HOM05D000977 ORTHO05D001094 4.4e-07 59.3 33 78.8
C09p43120 Brassica napus HOM05D000977 ORTHO05D001094 4.4e-07 59.3 33 78.8
BolC6t36171H Brassica oleracea HOM05D000977 ORTHO05D001094 4.4e-07 59.3 33 78.8
BolC6t36478H Brassica oleracea HOM05D000977 ORTHO05D001094 4.4e-07 59.3 46 63.0
BolC9t57183H Brassica oleracea HOM05D000977 ORTHO05D001094 4.4e-07 59.3 33 78.8
BcaB06g26548 Brassica carinata HOM05D000977 ORTHO05D001094 5.7e-07 58.9 33 75.8
BcaC04g22823 Brassica carinata HOM05D000977 ORTHO05D001094 5.7e-07 58.9 118 33.1
BcaC01g03210 Brassica carinata HOM05D000977 ORTHO05D001094 7.4e-07 58.5 114 35.1
BolC5t32181H Brassica oleracea HOM05D000977 ORTHO05D001094 7.4e-07 58.5 33 81.8
BcaB04g17368 Brassica carinata HOM05D000977 ORTHO05D001094 9.7e-07 58.2 83 39.8
BcaB06g26832 Brassica carinata HOM05D000977 ORTHO05D001094 9.7e-07 58.2 108 33.3
BcaB07g33549 Brassica carinata HOM05D000977 ORTHO05D001094 9.7e-07 58.2 33 75.8
BcaB06g27188 Brassica carinata HOM05D000977 ORTHO05D001094 1.3e-06 57.8 120 33.3
BcaC01g00337 Brassica carinata HOM05D000977 ORTHO05D001094 1.3e-06 57.8 125 32.0
BcaC08g43894 Brassica carinata HOM05D000977 ORTHO05D001094 1.3e-06 57.8 33 75.8
BcaC09g50760 Brassica carinata HOM05D000977 ORTHO05D013023 1.3e-06 57.8 88 37.5
C01p37340 Brassica napus HOM05D000977 ORTHO05D001094 1.3e-06 57.8 33 75.8
C03p54160 Brassica napus HOM05D000977 ORTHO05D001094 1.3e-06 57.8 33 75.8
C04p44910 Brassica napus HOM05D000977 ORTHO05D001094 1.3e-06 57.8 33 75.8
C06p04160 Brassica napus HOM05D000977 ORTHO05D001094 1.3e-06 57.8 33 75.8
C06p12800 Brassica napus HOM05D000977 ORTHO05D001094 1.3e-06 57.8 33 75.8
BolC6t36564H Brassica oleracea HOM05D000977 ORTHO05D001094 1.3e-06 57.8 33 75.8
BolC9t57495H Brassica oleracea HOM05D000977 ORTHO05D001094 1.3e-06 57.8 33 75.8
BolC9t58247H Brassica oleracea HOM05D000977 ORTHO05D001094 1.3e-06 57.8 33 75.8
BcaC01g02182 Brassica carinata HOM05D000977 ORTHO05D001094 1.7e-06 57.4 33 75.8
BcaC07g37500 Brassica carinata HOM05D000977 ORTHO05D001094 1.7e-06 57.4 33 75.8
BolC2t06798H Brassica oleracea HOM05D000977 ORTHO05D001094 1.7e-06 57.4 33 75.8
BolSC21t60291H Brassica oleracea HOM05D000977 ORTHO05D001094 1.7e-06 57.4 33 75.8
BcaB01g03497 Brassica carinata HOM05D000977 ORTHO05D010766 2.2e-06 57.0 33 78.8
BcaB08g35787 Brassica carinata HOM05D000977 ORTHO05D001094 2.2e-06 57.0 33 72.7
BcaC02g11716 Brassica carinata HOM05D000977 ORTHO05D001094 2.2e-06 57.0 98 33.7
A04p14250 Brassica napus HOM05D000977 ORTHO05D001094 2.2e-06 57.0 33 75.8
BraA03t15188Z Brassica rapa HOM05D000977 ORTHO05D001094 2.2e-06 57.0 33 75.8
Thhalv10002348m.g Eutrema salsugineum HOM05D000977 ORTHO05D001094 2.2e-06 57.0 104 29.8
AL8G14210 Arabidopsis lyrata HOM05D000977 ORTHO05D001094 3.7e-06 56.2 57 47.4
BolC4t25104H Brassica oleracea HOM05D000977 ORTHO05D001094 3.7e-06 56.2 33 72.7
BraA04t16482Z Brassica rapa HOM05D000977 ORTHO05D001094 3.7e-06 56.2 68 41.2
BcaB06g28518 Brassica carinata HOM05D000977 ORTHO05D001094 4.8e-06 55.8 33 72.7
C04p21620 Brassica napus HOM05D000977 ORTHO05D001094 4.8e-06 55.8 30 80.0
BcaB01g01550 Brassica carinata HOM05D000977 ORTHO05D001094 8.2e-06 55.1 33 72.7
BcaC02g09888 Brassica carinata HOM05D000977 ORTHO05D001094 8.2e-06 55.1 68 41.2
BcaC09g49398 Brassica carinata HOM05D000977 ORTHO05D001094 8.2e-06 55.1 88 37.5
BolC4t25105H Brassica oleracea HOM05D000977 ORTHO05D001094 8.2e-06 55.1 68 41.2
BolC7t41539H Brassica oleracea HOM05D000977 ORTHO05D001094 8.2e-06 55.1 112 33.0
BolC9t58246H Brassica oleracea HOM05D000977 ORTHO05D001094 8.2e-06 55.1 68 41.2
Carub.0007s3161 Capsella rubella HOM05D000977 ORTHO05D001094 8.2e-06 55.1 33 72.7


User provided reference genes

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