Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g26478 Brassica carinata HOM05D001498 ORTHO05D092859 5.6e-46 187.6 119 100.0
BcaB07g33085 Brassica carinata HOM05D001498 ORTHO05D095625 2.5e-38 162.2 98 86.7
BcaB04g17678 Brassica carinata HOM05D001498 ORTHO05D094760 1.3e-37 159.8 98 88.8
BcaB06g26483 Brassica carinata HOM05D001498 ORTHO05D095599 1.4e-36 156.4 97 87.6
BcaB01g03187 Brassica carinata HOM05D001498 ORTHO05D090608 8.4e-34 147.1 94 84.0
BcaB06g27027 Brassica carinata HOM05D001498 ORTHO05D092574 1.4e-33 146.4 98 85.7
BcaB08g35016 Brassica carinata HOM05D001498 ORTHO05D092631 2.1e-32 142.5 98 79.6
BcaB05g23077 Brassica carinata HOM05D001498 ORTHO05D091436 1.0e-31 140.2 98 80.6
BcaB07g33315 Brassica carinata HOM05D001498 ORTHO05D091495 5.8e-27 124.4 76 89.5
BcaB03g16298 Brassica carinata HOM05D001498 ORTHO05D095831 7.9e-24 114.0 96 71.9
BcaB03g16194 Brassica carinata HOM05D001498 ORTHO05D091006 1.1e-22 110.2 99 67.7
C07p49110 Brassica napus HOM05D001498 ORTHO05D097837 1.8e-20 102.8 76 75.0
C09p17600 Brassica napus HOM05D001498 ORTHO05D011506 4.1e-20 101.7 93 64.5
BcaB03g16497 Brassica carinata HOM05D001498 ORTHO05D008559 6.9e-20 100.9 98 64.3
C04p21380 Brassica napus HOM05D001498 ORTHO05D013028 6.9e-20 100.9 93 64.5
C08p17880 Brassica napus HOM05D001498 ORTHO05D001885 6.9e-20 100.9 93 64.5
BolC9t54653H Brassica oleracea HOM05D001498 ORTHO05D011506 6.9e-20 100.9 93 64.5
BcaC02g09776 Brassica carinata HOM05D001498 ORTHO05D016036 9.0e-20 100.5 93 64.5
A08p09540 Brassica napus HOM05D001498 ORTHO05D011506 9.0e-20 100.5 95 64.2
C01p30520 Brassica napus HOM05D001498 ORTHO05D001885 9.0e-20 100.5 76 73.7
C03p66370 Brassica napus HOM05D001498 ORTHO05D011506 9.0e-20 100.5 76 73.7
C06p31050 Brassica napus HOM05D001498 ORTHO05D011506 9.0e-20 100.5 76 73.7
C02p52020 Brassica napus HOM05D001498 ORTHO05D011506 1.2e-19 100.1 93 63.4
BolC2t11288H Brassica oleracea HOM05D001498 ORTHO05D011506 1.2e-19 100.1 93 63.4
C04p36710 Brassica napus HOM05D001498 ORTHO05D001885 2.0e-19 99.4 93 63.4
C01p38680 Brassica napus HOM05D001498 ORTHO05D011506 4.5e-19 98.2 93 63.4
BolC1t03827H Brassica oleracea HOM05D001498 ORTHO05D011506 4.5e-19 98.2 93 63.4
BcaC02g10287 Brassica carinata HOM05D001498 ORTHO05D093229 5.9e-19 97.8 93 62.4
BcaC04g20364 Brassica carinata HOM05D001498 ORTHO05D011506 7.7e-19 97.4 74 73.0
A08p07550 Brassica napus HOM05D001498 ORTHO05D011506 7.7e-19 97.4 76 71.1
C01p44920 Brassica napus HOM05D001498 ORTHO05D011506 7.7e-19 97.4 93 62.4
BcaC09g48967 Brassica carinata HOM05D001498 ORTHO05D011506 1.0e-18 97.1 93 62.4
A08p06060 Brassica napus HOM05D001498 ORTHO05D011506 1.0e-18 97.1 76 72.4
BcaB07g32352 Brassica carinata HOM05D001498 ORTHO05D021639 1.3e-18 96.7 95 61.1
BcaC05g27519 Brassica carinata HOM05D001498 ORTHO05D011506 1.3e-18 96.7 74 73.0
BcaC07g38657 Brassica carinata HOM05D001498 ORTHO05D011506 1.3e-18 96.7 93 62.4
BolC8t49067H Brassica oleracea HOM05D001498 ORTHO05D011506 1.3e-18 96.7 93 62.4
BcaC08g44373 Brassica carinata HOM05D001498 ORTHO05D011506 1.7e-18 96.3 93 61.3
A03p54380 Brassica napus HOM05D001498 ORTHO05D011506 1.7e-18 96.3 76 72.4
BraA08t32774Z Brassica rapa HOM05D001498 ORTHO05D001885 1.7e-18 96.3 76 71.1
BolC3t17911H Brassica oleracea HOM05D001498 ORTHO05D008559 2.2e-18 95.9 93 62.4
BraA03t15290Z Brassica rapa HOM05D001498 ORTHO05D011506 2.2e-18 95.9 95 61.1
BcaB06g26473 Brassica carinata HOM05D001498 ORTHO05D091656 2.9e-18 95.5 95 60.0
BcaB06g25739 Brassica carinata HOM05D001498 ORTHO05D093323 3.8e-18 95.1 95 60.0
C09p27470 Brassica napus HOM05D001498 ORTHO05D011506 3.8e-18 95.1 76 69.7
BcaB03g16152 Brassica carinata HOM05D001498 ORTHO05D093112 5.0e-18 94.7 84 66.7
C09p16580 Brassica napus HOM05D001498 ORTHO05D011506 5.0e-18 94.7 93 61.3
BcaB08g35076 Brassica carinata HOM05D001498 ORTHO05D021639 6.5e-18 94.4 92 62.0
BcaB03g15933 Brassica carinata HOM05D001498 ORTHO05D021639 1.1e-17 93.6 95 58.9
BcaB04g18432 Brassica carinata HOM05D001498 ORTHO05D090882 1.1e-17 93.6 95 60.0
BolC1t02817H Brassica oleracea HOM05D001498 ORTHO05D106172 1.1e-17 93.6 93 61.3
BolC8t47367H Brassica oleracea HOM05D001498 ORTHO05D011506 1.1e-17 93.6 93 61.3
BolC3t19484H Brassica oleracea HOM05D001498 ORTHO05D011506 1.9e-17 92.8 93 60.2
BcaB05g23120 Brassica carinata HOM05D001498 ORTHO05D090647 5.5e-17 91.3 91 60.4
C02p53500 Brassica napus HOM05D001498 ORTHO05D001885 5.5e-17 91.3 93 60.2
BcaB07g32913 Brassica carinata HOM05D001498 ORTHO05D091922 7.2e-17 90.9 130 56.2
BcaC02g09114 Brassica carinata HOM05D001498 ORTHO05D011506 9.4e-17 90.5 93 60.2
BcaC03g14315 Brassica carinata HOM05D001498 ORTHO05D008559 1.2e-16 90.1 69 72.5
BcaC06g36688 Brassica carinata HOM05D001498 ORTHO05D001885 1.2e-16 90.1 76 65.8
BcaB08g35461 Brassica carinata HOM05D001498 ORTHO05D090491 6.1e-16 87.8 95 57.9
C03p56230 Brassica napus HOM05D001498 ORTHO05D001885 7.9e-16 87.4 93 58.1
C09p21170 Brassica napus HOM05D001498 ORTHO05D011506 1.4e-15 86.7 95 58.9
BolC9t55019H Brassica oleracea HOM05D001498 ORTHO05D011506 1.4e-15 86.7 95 58.9
BcaC01g03078 Brassica carinata HOM05D001498 ORTHO05D008559 3.0e-15 85.5 95 56.8
BcaB07g32989 Brassica carinata HOM05D001498 ORTHO05D008559 1.1e-14 83.6 76 63.2
BcaC04g22591 Brassica carinata HOM05D001498 ORTHO05D095898 2.5e-14 82.4 66 69.7
C01p48970 Brassica napus HOM05D001498 ORTHO05D011506 2.5e-14 82.4 78 66.7
BcaB06g26755 Brassica carinata HOM05D001498 ORTHO05D092466 5.7e-14 81.3 68 67.6
C01p30560 Brassica napus HOM05D001498 ORTHO05D011506 1.7e-13 79.7 124 47.6
C03p66000 Brassica napus HOM05D001498 ORTHO05D001885 1.7e-13 79.7 93 54.8
BcaB05g22943 Brassica carinata HOM05D001498 ORTHO05D096110 2.2e-13 79.3 46 89.1
BcaB01g01484 Brassica carinata HOM05D001498 ORTHO05D091615 3.7e-13 78.6 113 51.3
BcaB05g23246 Brassica carinata HOM05D001498 ORTHO05D090900 6.3e-13 77.8 46 89.1
BcaB01g01309 Brassica carinata HOM05D001498 ORTHO05D091216 1.1e-12 77.0 46 87.0
BcaB04g18314 Brassica carinata HOM05D001498 ORTHO05D095953 1.8e-12 76.3 44 88.6
BcaB06g25736 Brassica carinata HOM05D001498 ORTHO05D021639 4.1e-12 75.1 59 71.2
BcaB03g16423 Brassica carinata HOM05D001498 ORTHO05D091575 1.5e-11 73.2 60 68.3
BcaC05g25872 Brassica carinata HOM05D001498 ORTHO05D011506 5.9e-11 71.2 89 53.9
BcaB04g17776 Brassica carinata HOM05D001498 ORTHO05D092868 7.7e-11 70.9 91 51.6
A01p28560 Brassica napus HOM05D001498 ORTHO05D021639 3.8e-10 68.6 45 82.2
BcaB01g01816 Brassica carinata HOM05D001498 ORTHO05D091844 4.2e-09 65.1 75 56.0
C05p25290 Brassica napus HOM05D001498 ORTHO05D019959 2.1e-08 62.8 98 46.9
BolC5t31266H Brassica oleracea HOM05D001498 ORTHO05D019959 3.6e-08 62.0 97 47.4
BcaB04g17703 Brassica carinata HOM05D001498 ORTHO05D021639 7.9e-08 60.8 64 56.2
BcaC04g19551 Brassica carinata HOM05D001498 ORTHO05D090991 1.0e-07 60.5 68 57.4
BcaC08g44056 Brassica carinata HOM05D001498 ORTHO05D091470 1.4e-07 60.1 43 74.4
BcaB07g33754 Brassica carinata HOM05D001498 ORTHO05D092729 1.8e-07 59.7 33 90.9
BcaC05g26789 Brassica carinata HOM05D001498 ORTHO05D094205 3.0e-07 58.9 66 57.6
BcaB07g33217 Brassica carinata HOM05D001498 ORTHO05D093085 3.9e-07 58.5 60 63.3
BcaB07g33084 Brassica carinata HOM05D001498 ORTHO05D092207 5.1e-07 58.2 48 70.8
BolC7t41038H Brassica oleracea HOM05D001498 ORTHO05D032253 8.8e-07 57.4 73 52.1
BcaB06g26727 Brassica carinata HOM05D001498 ORTHO05D093134 1.1e-06 57.0 68 58.8
BcaC06g36230 Brassica carinata HOM05D001498 ORTHO05D032253 1.1e-06 57.0 73 52.1
C07p06210 Brassica napus HOM05D001498 ORTHO05D032253 1.1e-06 57.0 73 52.1
BcaB05g23244 Brassica carinata HOM05D001498 ORTHO05D095601 2.0e-06 56.2 48 70.8
BcaB07g33220 Brassica carinata HOM05D001498 ORTHO05D096371 2.6e-06 55.8 70 51.4
BcaB02g11227 Brassica carinata HOM05D001498 ORTHO05D093168 7.4e-06 54.3 37 75.7


User provided reference genes

Program Settings