Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g26463 Brassica carinata HOM05D005115 ORTHO05D005703 2.5e-95 352.1 172 100.0
BcaNung01098 Brassica carinata HOM05D005115 ORTHO05D005703 3.9e-32 142.1 77 90.9
Sp7g21880 Schrenkiella parvula HOM05D005115 ORTHO05D005703 4.6e-25 118.6 74 81.1
BcaC09g50931 Brassica carinata HOM05D005115 ORTHO05D005703 9.7e-23 110.9 93 67.7
A01p15220 Brassica napus HOM05D005115 ORTHO05D005703 9.7e-23 110.9 103 61.2
C01p19150 Brassica napus HOM05D005115 ORTHO05D005703 9.7e-23 110.9 93 67.7
Carub.0007s1718 Capsella rubella HOM05D005115 ORTHO05D005703 2.1e-17 93.2 74 70.3
AT4G23910 Arabidopsis thaliana HOM05D005115 ORTHO05D005703 4.7e-17 92.0 97 59.8
Thhalv10026287m.g Eutrema salsugineum HOM05D005115 ORTHO05D005703 6.1e-17 91.7 74 70.3
BolC1t01841H Brassica oleracea HOM05D005115 ORTHO05D005703 2.3e-16 89.7 82 64.6
CARHR231330 Cardamine hirsuta HOM05D005115 ORTHO05D005703 7.4e-15 84.7 74 60.8
AL7G29420 Arabidopsis lyrata HOM05D005115 ORTHO05D005703 3.7e-14 82.4 74 64.9
Thhalv10028955m.g Eutrema salsugineum HOM05D005115 ORTHO05D005703 2.6e-07 59.7 109 40.4
CARHR255630 Cardamine hirsuta HOM05D005115 ORTHO05D005703 3.3e-07 59.3 90 45.6
Carub.0006s2972 Capsella rubella HOM05D005115 ORTHO05D005703 2.2e-06 56.6 85 43.5
Sp6g06500 Schrenkiella parvula HOM05D005115 ORTHO05D005703 6.3e-06 55.1 89 42.7


User provided reference genes

Program Settings