Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g26368 Brassica carinata HOM05D000051 ORTHO05D014854 7.9e-32 139.8 70 100.0
Thhalv10013420m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 9.4e-17 89.7 66 66.7
BraA03t10234Z Brassica rapa HOM05D000051 ORTHO05D016813 4.7e-16 87.4 66 66.7
BraA03t10235Z Brassica rapa HOM05D000051 ORTHO05D016813 6.1e-16 87.0 66 68.2
C03p10630 Brassica napus HOM05D000051 ORTHO05D000015 1.0e-15 86.3 66 68.2
C03p10600 Brassica napus HOM05D000160 ORTHO05D000914 1.8e-15 85.5 66 69.7
BcaB01g04894 Brassica carinata HOM05D000051 ORTHO05D000015 6.7e-15 83.6 68 67.6
AL6G30120 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 1.1e-14 82.8 66 62.1
A03p09100 Brassica napus HOM05D000051 ORTHO05D016813 1.5e-14 82.4 66 65.2
A03p09110 Brassica napus HOM05D000051 ORTHO05D016813 1.5e-14 82.4 66 66.7
BcaB01g05272 Brassica carinata HOM05D000051 ORTHO05D016813 3.3e-14 81.3 66 65.2
BolC3t13541H Brassica oleracea HOM05D000051 ORTHO05D016813 3.3e-14 81.3 66 65.2
BolC3t13877H Brassica oleracea HOM05D000051 ORTHO05D000015 5.7e-14 80.5 66 65.2
BcaB01g04892 Brassica carinata HOM05D000051 ORTHO05D016813 1.7e-13 79.0 66 63.6
C03p10610 Brassica napus HOM05D000051 ORTHO05D016813 1.7e-13 79.0 69 65.2
BraA03t10533Z Brassica rapa HOM05D000051 ORTHO05D016813 1.7e-13 79.0 66 63.6
C03p10650 Brassica napus HOM05D000051 ORTHO05D000015 2.8e-13 78.2 61 67.2
C03p10620 Brassica napus HOM05D000051 ORTHO05D016813 4.8e-13 77.4 54 74.1
AT5G18770 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 8.2e-13 76.6 66 60.6
BcaB01g04556 Brassica carinata HOM05D000051 ORTHO05D000015 8.2e-13 76.6 67 64.2
BcaB01g04893 Brassica carinata HOM05D000051 ORTHO05D000015 8.2e-13 76.6 52 75.0
A03p09120 Brassica napus HOM05D000051 ORTHO05D014854 2.4e-12 75.1 52 75.0
AL6G47630 Arabidopsis lyrata HOM05D000051 ORTHO05D014854 5.3e-12 73.9 65 60.0
Sp6g25610 Schrenkiella parvula HOM05D000051 ORTHO05D000015 1.3e-10 69.3 50 68.0
Carub.0002s0732 Capsella rubella HOM05D000051 ORTHO05D000015 2.2e-10 68.6 61 55.7
AL6G30130 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 2.9e-10 68.2 50 66.0
CARHR194210 Cardamine hirsuta HOM05D000051 ORTHO05D000015 2.9e-10 68.2 50 66.0
AT5G18780 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 3.8e-10 67.8 50 66.0
C03p14330 Brassica napus HOM05D000051 ORTHO05D014854 1.1e-09 66.2 69 59.4
BcaB01g04891 Brassica carinata HOM05D000051 ORTHO05D000015 3.2e-09 64.7 66 54.5
A03p12220 Brassica napus HOM05D000051 ORTHO05D000015 5.5e-09 63.9 67 59.7
BcaB01g05273 Brassica carinata HOM05D000051 ORTHO05D000015 1.6e-08 62.4 68 51.5
A09p26640 Brassica napus HOM05D000051 ORTHO05D014854 4.7e-08 60.8 52 59.6
BraA09t38237Z Brassica rapa HOM05D000051 ORTHO05D014854 4.7e-08 60.8 52 59.6
C09p33770 Brassica napus HOM05D000051 ORTHO05D014854 1.8e-07 58.9 52 57.7
BolC9t56213H Brassica oleracea HOM05D000051 ORTHO05D014854 1.8e-07 58.9 52 57.7
AL6G33710 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 1.2e-06 56.2 51 51.0


User provided reference genes

Program Settings