Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g26235 Brassica carinata HOM05D006081 ORTHO05D007628 3.5e-95 351.7 184 100.0
Sp3g19430 Schrenkiella parvula HOM05D006081 ORTHO05D007628 2.2e-81 305.8 191 87.4
Thhalv10021583m.g Eutrema salsugineum HOM05D006081 ORTHO05D007628 7.8e-79 297.4 190 84.2
C03p51690 Brassica napus HOM05D006081 ORTHO05D007628 7.3e-77 290.8 192 82.8
BcaC01g03506 Brassica carinata HOM05D006081 ORTHO05D007628 1.2e-76 290.0 192 82.3
BolC3t17454H Brassica oleracea HOM05D006081 ORTHO05D007628 1.2e-76 290.0 192 82.3
A03p42230 Brassica napus HOM05D006081 ORTHO05D007628 6.2e-76 287.7 192 82.3
BraA03t13376Z Brassica rapa HOM05D006081 ORTHO05D007628 6.2e-76 287.7 192 82.3
BcaC05g28170 Brassica carinata HOM05D006081 ORTHO05D007628 1.1e-75 287.0 187 84.0
C05p42070 Brassica napus HOM05D006081 ORTHO05D007628 1.1e-75 287.0 187 84.0
BolC5t32937H Brassica oleracea HOM05D006081 ORTHO05D007628 1.1e-75 287.0 187 84.0
BcaB04g19166 Brassica carinata HOM05D006081 ORTHO05D007628 1.7e-73 279.6 193 81.3
Aa31LG8G8110 Aethionema arabicum HOM05D006081 ORTHO05D007628 2.9e-73 278.9 190 78.4
CARHR097370 Cardamine hirsuta HOM05D006081 ORTHO05D007628 8.3e-73 277.3 194 79.4
AL3G35480 Arabidopsis lyrata HOM05D006081 ORTHO05D007628 3.5e-71 271.9 192 78.6
AT3G21400 Arabidopsis thaliana HOM05D006081 ORTHO05D007628 1.0e-70 270.4 191 78.0
Carub.0003s2143 Capsella rubella HOM05D006081 ORTHO05D007628 1.7e-70 269.6 195 77.9
A05p27230 Brassica napus HOM05D006081 ORTHO05D007628 1.0e-62 243.8 166 80.7
BraA05t21612Z Brassica rapa HOM05D006081 ORTHO05D007628 2.3e-62 242.7 166 80.7
THA.LOC104820251 Tarenaya hassleriana HOM05D006081 ORTHO05D007628 1.6e-55 219.9 190 65.3
Dinv29771 Davidia involucrata HOM05D006081 ORTHO05D007628 3.9e-46 188.7 183 57.9
Cpa.g.sc16.161 Carica papaya HOM05D006081 ORTHO05D007628 1.3e-44 183.7 189 55.0
Prupe.1G138200 Prunus persica HOM05D006081 ORTHO05D007628 1.3e-44 183.7 196 54.6
vmacro08134 Vaccinium macrocarpon HOM05D006081 ORTHO05D007628 3.7e-44 182.2 189 55.0
Rhsim04G0220300 Rhododendron simsii HOM05D006081 ORTHO05D007628 6.2e-44 181.4 193 54.4
Gohir.A02G048800 Gossypium hirsutum HOM05D006081 ORTHO05D007628 8.1e-44 181.0 186 53.8
ClCG06G005230 Citrullus lanatus HOM05D006081 ORTHO05D007628 1.4e-43 180.3 188 52.7
Lsat_1_v5_gn_5_49301 Lactuca sativa HOM05D006081 ORTHO05D007628 1.4e-43 180.3 186 55.9
Thecc.04G283000 Theobroma cacao HOM05D006081 ORTHO05D007628 2.4e-43 179.5 184 54.3
MSTRG.21799 Avicennia marina HOM05D006081 ORTHO05D007628 4.0e-43 178.7 188 55.3
Manes.15G013500 Manihot esculenta HOM05D006081 ORTHO05D007628 4.0e-43 178.7 190 52.6
Cfa015373 Carpinus fangiana HOM05D006081 ORTHO05D007628 5.3e-43 178.3 187 54.5
Nitab4.5_0003749g0060 Nicotiana tabacum HOM05D006081 ORTHO05D007628 5.3e-43 178.3 183 54.1
CSS0030149 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 9.0e-43 177.6 185 53.0
Nitab4.5_0003972g0010 Nicotiana tabacum HOM05D006081 ORTHO05D007628 9.0e-43 177.6 185 54.6
Atru.chr4.2827 Acer truncatum HOM05D006081 ORTHO05D007628 1.2e-42 177.2 181 57.5
Actinidia40266 Actinidia chinensis HOM05D006081 ORTHO05D007628 1.2e-42 177.2 186 54.3
Cc00_g10580 Coffea canephora HOM05D006081 ORTHO05D007628 1.2e-42 177.2 188 54.3
Eucgr.H03897 Eucalyptus grandis HOM05D006081 ORTHO05D007628 1.2e-42 177.2 184 54.9
Manes.03G194000 Manihot esculenta HOM05D006081 ORTHO05D007628 2.6e-42 176.0 189 52.4
Solyc01g067080.3 Solanum lycopersicum HOM05D006081 ORTHO05D007628 2.6e-42 176.0 185 52.4
Sopen01g028790 Solanum pennellii HOM05D006081 ORTHO05D007628 2.6e-42 176.0 185 52.4
PGSC0003DMG400022662 Solanum tuberosum HOM05D006081 ORTHO05D007628 2.6e-42 176.0 183 50.8
Peaxi162Scf00534g00212 Petunia axillaris HOM05D006081 ORTHO05D007628 3.4e-42 175.6 184 53.3
MD16G1171400 Malus domestica HOM05D006081 ORTHO05D007628 4.5e-42 175.3 185 56.2
FvH4_4g17860 Fragaria vesca HOM05D006081 ORTHO05D007628 1.0e-41 174.1 186 53.2
Gohir.D02G054100 Gossypium hirsutum HOM05D006081 ORTHO05D007628 1.0e-41 174.1 184 52.2
Gorai.005G059600 Gossypium raimondii HOM05D006081 ORTHO05D007628 1.0e-41 174.1 184 52.2
HanXRQChr03g0079991 Helianthus annuus HOM05D006081 ORTHO05D007628 1.0e-41 174.1 196 52.6
RcHm_v2.0_Chr4g0421971 Rosa chinensis HOM05D006081 ORTHO05D007628 1.0e-41 174.1 192 50.0
Sed0014998 Sechium edule HOM05D006081 ORTHO05D007628 1.0e-41 174.1 188 52.1
TWI53G0242 Tripterygium wilfordii HOM05D006081 ORTHO05D007628 1.3e-41 173.7 189 54.0
Duzib151G0152 Durio zibethinus HOM05D006081 ORTHO05D007628 1.7e-41 173.3 185 53.0
Potri.008G210100 Populus trichocarpa HOM05D006081 ORTHO05D007628 1.7e-41 173.3 184 55.4
SGA_v2.0_scaffold55G19699 Striga asiatica HOM05D006081 ORTHO05D007628 1.7e-41 173.3 190 52.1
FAN17G1774 Fragaria x ananassa HOM05D006081 ORTHO05D007628 2.9e-41 172.6 186 51.1
Lj6A673G88 Lonicera japonica HOM05D006081 ORTHO05D007628 2.9e-41 172.6 134 64.2
Ciclev10005978m.g Citrus clementina HOM05D006081 ORTHO05D007628 3.8e-41 172.2 189 55.6
TAR636G3617 Trochodendron aralioides HOM05D006081 ORTHO05D007628 3.8e-41 172.2 187 54.5
FAN12G2613 Fragaria x ananassa HOM05D006081 ORTHO05D007628 4.9e-41 171.8 186 52.7
CsaV3_6G017270 Cucumis sativus L. HOM05D006081 ORTHO05D007628 6.5e-41 171.4 187 51.3
FAN07G2255 Fragaria x ananassa HOM05D006081 ORTHO05D007628 6.5e-41 171.4 186 52.7
Medtr2g436940 Medicago truncatula HOM05D006081 ORTHO05D007628 8.4e-41 171.0 195 49.7
CiPaw.01G149700 Carya illinoinensis HOM05D006081 ORTHO05D007628 1.4e-40 170.2 192 51.0
PGR031G1107 Punica granatum HOM05D006081 ORTHO05D007628 2.5e-40 169.5 182 50.5
GSVIVG01017744001 Vitis vinifera HOM05D006081 ORTHO05D007628 5.5e-40 168.3 198 50.5
ECA240G0281 Erigeron canadensis HOM05D006081 ORTHO05D007628 7.1e-40 167.9 191 53.4
Ca_01966_v3 Cicer arietinum L. HOM05D006081 ORTHO05D007628 1.2e-39 167.2 192 50.0
arahy.Tifrunner.gnm1.ann1.EZB5Q6 Arachis hypogaea HOM05D006081 ORTHO05D007628 1.6e-39 166.8 190 50.0
MELO3C021343.2 Cucumis melo HOM05D006081 ORTHO05D007628 2.7e-39 166.0 187 50.3
Migut.N00097 Erythranthe guttata HOM05D006081 ORTHO05D007628 2.7e-39 166.0 199 48.7
Psat1g153280 Pisum sativum HOM05D006081 ORTHO05D007628 2.7e-39 166.0 192 47.9
CiPaw.02G083900 Carya illinoinensis HOM05D006081 ORTHO05D007628 3.5e-39 165.6 195 48.7
VMungo1309G0529 Vigna mungo HOM05D006081 ORTHO05D007628 6.0e-39 164.9 190 50.0
Lj6g0000146 Lotus japonicus HOM05D006081 ORTHO05D007628 7.9e-39 164.5 194 47.9
SalBow5G1281 Salvia bowleyana HOM05D006081 ORTHO05D007628 7.9e-39 164.5 194 50.0
arahy.Tifrunner.gnm1.ann1.TA2ZSY Arachis hypogaea HOM05D006081 ORTHO05D007628 1.0e-38 164.1 190 48.9
Oeu027733.1 Olea europaea HOM05D006081 ORTHO05D007628 1.8e-38 163.3 195 49.7
Sabra08G0154300 Salix brachista HOM05D006081 ORTHO05D007628 1.8e-38 163.3 187 54.5
Lalb_Chr18g0051761 Lupinus albus HOM05D006081 ORTHO05D007628 3.0e-38 162.5 184 47.3
Phvul.009G246800 Phaseolus vulgaris HOM05D006081 ORTHO05D007628 3.0e-38 162.5 190 49.5
Glyma.15G153100 Glycine max HOM05D006081 ORTHO05D007628 1.1e-37 160.6 192 49.5
TAR365G0221 Trochodendron aralioides HOM05D006081 ORTHO05D007628 7.4e-37 157.9 177 49.2
PSO170G3586 Papaver somniferum HOM05D006081 ORTHO05D007628 9.6e-37 157.5 188 49.5
QL06p008580 Quercus lobata HOM05D006081 ORTHO05D007628 9.6e-37 157.5 189 49.2
PSO210G2816 Papaver somniferum HOM05D006081 ORTHO05D007628 2.1e-36 156.4 187 48.1
EL10Ac3g06586 Beta vulgaris HOM05D006081 ORTHO05D007628 2.8e-36 156.0 188 44.7
Glyma.09G045900 Glycine max HOM05D006081 ORTHO05D007628 2.8e-36 156.0 189 47.1
MBI19_g30830_MAGBIO Magnolia biondii HOM05D006081 ORTHO05D007628 4.8e-36 155.2 197 47.2
Sc13g0003510 Simmondsia chinensis HOM05D006081 ORTHO05D007628 4.8e-36 155.2 191 47.6
CANSAT78G1428 Cannabis sativa HOM05D006081 ORTHO05D007628 6.2e-36 154.8 191 47.1
TPR.G26808 Trifolium pratense HOM05D006081 ORTHO05D007628 1.4e-35 153.7 126 60.3
DCAR_030534 Daucus carota HOM05D006081 ORTHO05D007628 1.5e-34 150.2 193 46.6
AUR62043167 Chenopodium quinoa HOM05D006081 ORTHO05D007628 2.0e-34 149.8 136 55.1
Lalb_Chr20g0114491 Lupinus albus HOM05D006081 ORTHO05D007628 2.0e-34 149.8 186 47.3
Oeu023291.2 Olea europaea HOM05D006081 ORTHO05D007628 5.8e-34 148.3 227 41.9
FAN12G2474 Fragaria x ananassa HOM05D006081 ORTHO05D007628 1.0e-33 147.5 113 64.6
CSS0018730 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 3.8e-33 145.6 109 66.1
CAN.G556.12 Capsicum annuum HOM05D006081 ORTHO05D007628 1.1e-32 144.1 113 62.8
unitig_26.g10542 Utricularia gibba HOM05D006081 ORTHO05D007628 4.2e-32 142.1 178 44.4
AUR62036825 Chenopodium quinoa HOM05D006081 ORTHO05D007628 9.3e-32 141.0 135 52.6
Aqoxy2G03026 Aquilegia oxysepala HOM05D006081 ORTHO05D007628 1.0e-30 137.5 126 58.7
CDE02G2676 Ceratophyllum demersum HOM05D006081 ORTHO05D000739 1.8e-30 136.7 191 45.0
CDE09G1305 Ceratophyllum demersum HOM05D006081 ORTHO05D007628 1.3e-28 130.6 190 43.7
Zm00001eb410420 Zea mays HOM05D006081 ORTHO05D007628 1.0e-25 120.9 192 40.6
SEGI_25455 Sequoiadendron giganteum HOM05D006081 ORTHO05D007628 6.5e-25 118.2 187 39.0
Os12g0540700 Oryza sativa ssp. japonica HOM05D006081 ORTHO05D007628 8.5e-25 117.9 126 49.2
ATR0706G092 Amborella trichopoda HOM05D006081 ORTHO05D007628 1.4e-24 117.1 129 50.4
AUR62038616 Chenopodium quinoa HOM05D006081 ORTHO05D007628 3.2e-24 115.9 93 57.0
TAR365G0700 Trochodendron aralioides HOM05D006081 ORTHO05D007628 2.1e-23 113.2 92 60.9
MBI19_g12810_MAGBIO Magnolia biondii HOM05D006081 ORTHO05D007628 1.4e-22 110.5 93 57.0
Haze_01224 Corylus avellana HOM05D006081 ORTHO05D007628 8.8e-22 107.8 83 60.2
HPP92_001321 Vanilla planifolia HOM05D006081 ORTHO05D007628 9.1e-19 97.8 178 40.4
Actinidia01470 Actinidia chinensis HOM05D006081 ORTHO05D007628 2.6e-18 96.3 183 37.2
MD13G1169900 Malus domestica HOM05D006081 ORTHO05D007628 3.4e-18 95.9 128 51.6
Potri.010G024000 Populus trichocarpa HOM05D006081 ORTHO05D007628 7.9e-15 84.7 66 62.1
CSS0011440 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 1.4e-14 84.0 109 45.9
Pp3c1_29830 Physcomitrium patens HOM05D006081 ORTHO05D007628 1.4e-11 73.9 126 35.7
Mapoly0041s0011 Marchantia polymorpha HOM05D006081 ORTHO05D007628 3.5e-10 69.3 127 37.0
Haze_01225 Corylus avellana HOM05D006081 ORTHO05D007628 7.7e-10 68.2 96 47.9
AagrBONN_evm.TU.Sc2ySwM_368.2309 Anthoceros agrestis HOM05D006081 ORTHO05D007628 1.1e-08 64.3 169 28.4
BolC7t43135H Brassica oleracea HOM05D006081 ORTHO05D033520 3.2e-08 62.8 34 88.2
FAN22G0279 Fragaria x ananassa HOM05D006081 ORTHO05D007628 4.2e-08 62.4 91 46.2
CBR_g29894 Chara braunii HOM05D008095 ORTHO05D010826 2.7e-07 59.7 118 28.0
Nn5g30060 Nelumbo nucifera HOM05D006081 ORTHO05D007628 1.4e-06 57.4 98 44.9


User provided reference genes

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