Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g26151 Brassica carinata HOM05D013103 ORTHO05D000411 2.7e-109 398.7 200 100.0
BcaC02g11107 Brassica carinata HOM05D000496 ORTHO05D000411 2.7e-40 169.5 157 61.1
BcaC06g36411 Brassica carinata HOM05D000496 ORTHO05D000411 2.8e-37 159.5 107 69.2
AT3G31430 Arabidopsis thaliana HOM05D000496 ORTHO05D000411 5.2e-36 155.2 110 64.5
BcaC09g51704 Brassica carinata HOM05D000496 ORTHO05D000411 4.4e-35 152.1 107 63.6
BcaC01g02297 Brassica carinata HOM05D000496 ORTHO05D000411 7.5e-35 151.4 126 55.6
BcaC07g37790 Brassica carinata HOM05D000496 ORTHO05D000411 7.5e-35 151.4 107 62.6
BcaC02g10886 Brassica carinata HOM05D000496 ORTHO05D000411 1.7e-34 150.2 194 45.4
BcaC02g09241 Brassica carinata HOM05D000496 ORTHO05D000411 1.4e-33 147.1 107 63.6
BcaC09g48758 Brassica carinata HOM05D000496 ORTHO05D000411 5.4e-33 145.2 107 59.8
BcaC02g08608 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-30 137.5 107 58.9
CARHR292290 Cardamine hirsuta HOM05D000496 ORTHO05D000411 1.9e-30 136.7 107 56.1
BcaB06g27366 Brassica carinata HOM05D000496 ORTHO05D000411 1.2e-29 134.0 107 58.9
Aa31LG1G4950 Aethionema arabicum HOM05D000496 ORTHO05D000411 2.6e-27 126.3 106 51.9
Aa31LG6G9170 Aethionema arabicum HOM05D000496 ORTHO05D000411 4.4e-27 125.6 106 50.9
Aa31sc1015G10 Aethionema arabicum HOM05D000496 ORTHO05D000411 5.8e-27 125.2 122 50.8
BcaC03g15081 Brassica carinata HOM05D000496 ORTHO05D000411 5.8e-27 125.2 107 55.1
Aa31sc387G10 Aethionema arabicum HOM05D000496 ORTHO05D000411 7.5e-27 124.8 126 46.8
Aa31LG9G3350 Aethionema arabicum HOM05D000496 ORTHO05D000411 3.7e-26 122.5 103 53.4
Aa31LG8G12070 Aethionema arabicum HOM05D000496 ORTHO05D000411 4.1e-25 119.0 120 45.0
Aa31sc153G50 Aethionema arabicum HOM05D000003 ORTHO05D000411 7.0e-25 118.2 112 48.2
Aa31sc480G10 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.2e-24 117.5 107 46.7
Aa31sc52G80 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.6e-24 117.1 112 48.2
BcaB02g10661 Brassica carinata HOM05D000496 ORTHO05D000411 7.8e-24 114.8 117 43.6
BcaB01g00938 Brassica carinata HOM05D000496 ORTHO05D000411 3.6e-21 105.9 160 33.8
C09p39910 Brassica napus HOM05D000496 ORTHO05D000411 3.6e-21 105.9 117 40.2
CARHR260200 Cardamine hirsuta HOM05D013103 ORTHO05D000411 8.1e-21 104.8 96 47.9
BcaB05g22432 Brassica carinata HOM05D000003 ORTHO05D000004 1.8e-20 103.6 115 42.6
CARHR119870 Cardamine hirsuta HOM05D000496 ORTHO05D000411 1.8e-20 103.6 97 50.5
BcaB04g17740 Brassica carinata HOM05D000496 ORTHO05D000411 3.1e-20 102.8 99 51.5
BolC8t51212H Brassica oleracea HOM05D000496 ORTHO05D000411 3.1e-20 102.8 107 46.7
C01p46210 Brassica napus HOM05D000496 ORTHO05D000411 1.2e-19 100.9 107 45.8
BcaB06g25722 Brassica carinata HOM05D013103 ORTHO05D018244 4.4e-19 99.0 111 44.1
CARHR153090 Cardamine hirsuta HOM05D000496 ORTHO05D000411 1.7e-18 97.1 106 40.6
SpUn0816_0010 Schrenkiella parvula HOM05D013103 ORTHO05D000411 4.9e-18 95.5 101 39.6
AT2G13450 Arabidopsis thaliana HOM05D000496 ORTHO05D000411 5.4e-17 92.0 112 39.3
AT2G13510 Arabidopsis thaliana HOM05D000496 ORTHO05D000411 5.4e-17 92.0 110 41.8
BraA06t25016Z Brassica rapa HOM05D013103 ORTHO05D018244 4.6e-16 89.0 79 50.6
BcaC08g42867 Brassica carinata HOM05D005355 ORTHO05D006591 1.7e-15 87.0 132 40.9
AT3G57587 Arabidopsis thaliana HOM05D000496 ORTHO05D000411 3.0e-15 86.3 110 40.9
AT2G41590 Arabidopsis thaliana HOM05D000496 ORTHO05D000411 6.6e-15 85.1 99 40.4
Aa31sc248G30 Aethionema arabicum HOM05D000003 ORTHO05D000004 8.6e-15 84.7 79 45.6
AL5G35340 Arabidopsis lyrata HOM05D000496 ORTHO05D000411 1.1e-14 84.3 109 39.4
AT5G18636 Arabidopsis thaliana HOM05D000496 ORTHO05D000411 1.1e-14 84.3 99 41.4
AL8G11190 Arabidopsis lyrata HOM05D018035 ORTHO05D000411 1.5e-14 84.0 96 43.8
AT2G02103 Arabidopsis thaliana HOM05D000496 ORTHO05D000411 2.5e-14 83.2 99 41.4
AT5G25200 Arabidopsis thaliana HOM05D000496 ORTHO05D000411 2.5e-14 83.2 99 40.4
AT2G17920 Arabidopsis thaliana HOM05D000496 ORTHO05D000411 7.3e-14 81.6 99 41.4
AT5G25600 Arabidopsis thaliana HOM05D000496 ORTHO05D000411 6.8e-12 75.1 110 36.4
Aa31sc179G10 Aethionema arabicum HOM05D013103 ORTHO05D018244 8.9e-12 74.7 62 46.8
AT5G36228 Arabidopsis thaliana HOM05D000496 ORTHO05D000411 1.2e-11 74.3 110 36.4
BcaB06g25900 Brassica carinata HOM05D000496 ORTHO05D000411 2.6e-11 73.2 110 38.2
BcaB08g35825 Brassica carinata HOM05D013103 ORTHO05D018244 2.6e-11 73.2 106 36.8
CARHR100140 Cardamine hirsuta HOM05D000496 ORTHO05D000411 4.4e-11 72.4 112 36.6
AT5G35737 Arabidopsis thaliana HOM05D000496 ORTHO05D000411 5.8e-11 72.0 112 34.8
AT2G13500 Arabidopsis thaliana HOM05D000496 ORTHO05D000411 7.6e-11 71.6 94 37.2
Aa31LG5G23740 Aethionema arabicum HOM05D000496 ORTHO05D000411 9.9e-11 71.2 68 45.6
AL300U10010 Arabidopsis lyrata HOM05D000496 ORTHO05D000411 9.9e-11 71.2 109 35.8
AL3G39280 Arabidopsis lyrata HOM05D000496 ORTHO05D000411 9.9e-11 71.2 109 35.8
BcaB05g24429 Brassica carinata HOM05D000496 ORTHO05D000411 9.9e-11 71.2 102 40.2
C01p39530 Brassica napus HOM05D000496 ORTHO05D000411 1.3e-10 70.9 109 33.9
Sp3g21870 Schrenkiella parvula HOM05D000496 ORTHO05D000411 1.3e-10 70.9 109 33.9
C09p36210 Brassica napus HOM05D013103 ORTHO05D018244 1.7e-10 70.5 79 39.2
BolC9t56459H Brassica oleracea HOM05D013103 ORTHO05D018244 1.7e-10 70.5 79 39.2
BraA03t09650Z Brassica rapa HOM05D000496 ORTHO05D000411 2.9e-10 69.7 92 41.3
BcaB01g03263 Brassica carinata HOM05D000496 ORTHO05D000411 3.8e-10 69.3 119 34.5
BcaB03g15483 Brassica carinata HOM05D000496 ORTHO05D000411 3.8e-10 69.3 116 34.5
BolC3t21595H Brassica oleracea HOM05D000496 ORTHO05D000411 4.9e-10 68.9 92 41.3
BraA02t07554Z Brassica rapa HOM05D000496 ORTHO05D000411 4.9e-10 68.9 107 34.6
AL8G23770 Arabidopsis lyrata HOM05D000496 ORTHO05D000411 8.4e-10 68.2 75 41.3
BcaC01g00202 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-09 67.8 120 34.2
BcaC01g00511 Brassica carinata HOM05D000496 ORTHO05D000411 1.4e-09 67.4 112 33.9
Thhalv10002589m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 1.4e-09 67.4 110 32.7
BcaC08g43020 Brassica carinata HOM05D000496 ORTHO05D000411 1.9e-09 67.0 109 34.9
BraA01t02968Z Brassica rapa HOM05D000496 ORTHO05D000411 1.9e-09 67.0 103 31.1
BcaB01g02832 Brassica carinata HOM05D000496 ORTHO05D000411 2.4e-09 66.6 113 35.4
Aa31LG11G8630 Aethionema arabicum HOM05D000496 ORTHO05D000411 4.1e-09 65.9 107 29.0
BcaB04g19933 Brassica carinata HOM05D000496 ORTHO05D000411 5.4e-09 65.5 107 30.8
Aa31LG3G6220 Aethionema arabicum HOM05D000496 ORTHO05D000411 9.2e-09 64.7 96 35.4
AT3G42140 Arabidopsis thaliana HOM05D000496 ORTHO05D000411 9.2e-09 64.7 107 34.6
Thhalv10009818m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 9.2e-09 64.7 107 35.5
Thhalv10003380m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 1.2e-08 64.3 97 33.0
Aa31LG11G8260 Aethionema arabicum HOM05D000496 ORTHO05D000411 1.6e-08 63.9 107 29.9
BcaC05g28775 Brassica carinata HOM05D000496 ORTHO05D000411 2.7e-08 63.2 116 30.2
BcaB07g32270 Brassica carinata HOM05D000496 ORTHO05D000411 3.5e-08 62.8 118 31.4
Aa31LG1G4620 Aethionema arabicum HOM05D000496 ORTHO05D000411 4.6e-08 62.4 91 34.1
Aa31LG7G14920 Aethionema arabicum HOM05D000496 ORTHO05D000411 4.6e-08 62.4 104 31.7
Aa31sc31G40 Aethionema arabicum HOM05D000003 ORTHO05D000411 4.6e-08 62.4 109 30.3
Aa31sc914G60 Aethionema arabicum HOM05D000496 ORTHO05D000411 4.6e-08 62.4 91 33.0
Thhalv10028300m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 6.0e-08 62.0 102 32.4
Aa31LG1G9560 Aethionema arabicum HOM05D000496 ORTHO05D000411 1.0e-07 61.2 104 30.8
BcaC09g49677 Brassica carinata HOM05D000496 ORTHO05D011709 1.0e-07 61.2 90 40.0
Aa31LG3G3240 Aethionema arabicum HOM05D000496 ORTHO05D000411 1.3e-07 60.8 104 32.7
BcaB06g29541 Brassica carinata HOM05D000496 ORTHO05D000411 1.3e-07 60.8 112 33.0
BcaB07g33425 Brassica carinata HOM05D000496 ORTHO05D000411 1.3e-07 60.8 88 34.1
BcaC06g35182 Brassica carinata HOM05D000496 ORTHO05D017591 1.3e-07 60.8 109 33.9
BolC7t41620H Brassica oleracea HOM05D000496 ORTHO05D000411 1.3e-07 60.8 103 32.0
BcaB08g36396 Brassica carinata HOM05D000496 ORTHO05D000411 1.7e-07 60.5 79 40.5
BcaC09g48325 Brassica carinata HOM05D000496 ORTHO05D000411 1.7e-07 60.5 109 33.0
BcaB08g35229 Brassica carinata HOM05D000496 ORTHO05D000411 2.3e-07 60.1 110 32.7
BcaC08g42965 Brassica carinata HOM05D000496 ORTHO05D000411 2.3e-07 60.1 55 47.3
BcaC09g49291 Brassica carinata HOM05D000496 ORTHO05D000411 2.3e-07 60.1 113 32.7
Aa31LG9G6670 Aethionema arabicum HOM05D000496 ORTHO05D000411 3.0e-07 59.7 137 27.0
BcaB01g01907 Brassica carinata HOM05D000496 ORTHO05D000411 3.0e-07 59.7 85 37.6
BcaC05g27187 Brassica carinata HOM05D000496 ORTHO05D000411 3.0e-07 59.7 100 32.0
BcaC07g42701 Brassica carinata HOM05D000496 ORTHO05D000411 3.0e-07 59.7 82 36.6
BcaC08g42936 Brassica carinata HOM05D000496 ORTHO05D000411 3.0e-07 59.7 98 33.7
Aa31LG10G11540 Aethionema arabicum HOM05D000496 ORTHO05D000411 3.9e-07 59.3 114 29.8
Aa31LG9G4930 Aethionema arabicum HOM05D000496 ORTHO05D000411 3.9e-07 59.3 101 31.7
BcaC06g33741 Brassica carinata HOM05D000496 ORTHO05D000411 3.9e-07 59.3 79 39.2
BcaC07g40069 Brassica carinata HOM05D000496 ORTHO05D000411 3.9e-07 59.3 91 30.8
BcaNung04087 Brassica carinata HOM05D000496 ORTHO05D000411 3.9e-07 59.3 91 30.8
Aa31LG9G15190 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.1e-07 58.9 96 34.4
BcaC09g49394 Brassica carinata HOM05D000003 ORTHO05D000411 5.1e-07 58.9 116 31.0
Sp3g24980 Schrenkiella parvula HOM05D000305 ORTHO05D000065 5.1e-07 58.9 64 37.5
BcaB05g24019 Brassica carinata HOM05D000496 ORTHO05D000411 6.6e-07 58.5 109 31.2
BcaC01g00782 Brassica carinata HOM05D000496 ORTHO05D011793 6.6e-07 58.5 106 31.1
BcaC02g10030 Brassica carinata HOM05D000496 ORTHO05D000411 8.7e-07 58.2 79 40.5
Thhalv10012330m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 8.7e-07 58.2 62 40.3
BolC2t11809H Brassica oleracea HOM05D000496 ORTHO05D000411 1.1e-06 57.8 91 33.0
BolC6t36354H Brassica oleracea HOM05D000496 ORTHO05D000411 1.1e-06 57.8 99 32.3
Aa31sc168G20 Aethionema arabicum HOM05D000496 ORTHO05D000411 1.5e-06 57.4 96 32.3
Aa31sc222G80 Aethionema arabicum HOM05D000496 ORTHO05D000411 1.5e-06 57.4 104 26.9
BraA06t25656Z Brassica rapa HOM05D000496 ORTHO05D000411 1.5e-06 57.4 108 31.5
Aa31sc407G20 Aethionema arabicum HOM05D000496 ORTHO05D000411 1.9e-06 57.0 91 29.7
BcaB08g35777 Brassica carinata HOM05D000496 ORTHO05D000411 1.9e-06 57.0 91 30.8
BolC6t37172H Brassica oleracea HOM05D000496 ORTHO05D000411 1.9e-06 57.0 116 31.9
Aa31LG4G12870 Aethionema arabicum HOM05D000496 ORTHO05D000411 2.5e-06 56.6 90 28.9
Aa31LG7G2740 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.5e-06 56.6 90 33.3
BcaB03g14160 Brassica carinata HOM05D000496 ORTHO05D000411 2.5e-06 56.6 90 31.1
BcaB07g33380 Brassica carinata HOM05D000496 ORTHO05D000411 2.5e-06 56.6 79 34.2
BcaC01g00784 Brassica carinata HOM05D000496 ORTHO05D000411 2.5e-06 56.6 94 30.9
BolC7t41031H Brassica oleracea HOM05D000496 ORTHO05D000411 2.5e-06 56.6 108 29.6
CARHR184570 Cardamine hirsuta HOM05D000496 ORTHO05D000411 2.5e-06 56.6 100 36.0
Aa31LG2G13340 Aethionema arabicum HOM05D000496 ORTHO05D000411 3.3e-06 56.2 104 26.0
Aa31sc62G40 Aethionema arabicum HOM05D000496 ORTHO05D000411 3.3e-06 56.2 109 27.5
BcaB05g21700 Brassica carinata HOM05D000496 ORTHO05D000411 3.3e-06 56.2 93 33.3
BcaC06g36164 Brassica carinata HOM05D000496 ORTHO05D000411 3.3e-06 56.2 91 30.8
BcaC07g38247 Brassica carinata HOM05D000496 ORTHO05D000411 3.3e-06 56.2 95 29.5
BcaC07g38676 Brassica carinata HOM05D000496 ORTHO05D000411 3.3e-06 56.2 91 35.2
BolC7t41893H Brassica oleracea HOM05D000496 ORTHO05D000411 3.3e-06 56.2 94 26.6
BolC7t42883H Brassica oleracea HOM05D000496 ORTHO05D000411 3.3e-06 56.2 91 33.0
Thhalv10017646m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 3.3e-06 56.2 92 29.3
BcaB04g17647 Brassica carinata HOM05D000496 ORTHO05D000411 4.3e-06 55.8 109 30.3
Aa31LG2G19810 Aethionema arabicum HOM05D000496 ORTHO05D000411 5.6e-06 55.5 105 30.5
BcaC06g36253 Brassica carinata HOM05D000496 ORTHO05D000411 5.6e-06 55.5 93 31.2
Aa31sc64G60 Aethionema arabicum HOM05D000496 ORTHO05D000411 7.3e-06 55.1 99 27.3
BcaB07g29799 Brassica carinata HOM05D000496 ORTHO05D000411 7.3e-06 55.1 91 31.9
BcaC03g15116 Brassica carinata HOM05D000496 ORTHO05D000411 7.3e-06 55.1 90 30.0
BcaC04g19988 Brassica carinata HOM05D000496 ORTHO05D000411 7.3e-06 55.1 94 29.8
BcaC05g28073 Brassica carinata HOM05D000003 ORTHO05D000411 7.3e-06 55.1 106 29.2
BcaC09g50123 Brassica carinata HOM05D000496 ORTHO05D000411 7.3e-06 55.1 94 29.8
BcaC09g51060 Brassica carinata HOM05D000496 ORTHO05D000411 7.3e-06 55.1 79 38.0
BcaNung00070 Brassica carinata HOM05D000496 ORTHO05D000411 7.3e-06 55.1 88 31.8
C04p17770 Brassica napus HOM05D000496 ORTHO05D000411 7.3e-06 55.1 88 33.0
BolC1t02804H Brassica oleracea HOM05D000496 ORTHO05D000411 7.3e-06 55.1 94 29.8
BolC6t36245H Brassica oleracea HOM05D000496 ORTHO05D000411 7.3e-06 55.1 64 42.2
BolC8t49529H Brassica oleracea HOM05D000496 ORTHO05D000411 7.3e-06 55.1 104 29.8
BcaB02g08512 Brassica carinata HOM05D000496 ORTHO05D000411 9.6e-06 54.7 91 30.8
BcaB08g34297 Brassica carinata HOM05D000496 ORTHO05D000411 9.6e-06 54.7 88 31.8
BcaC01g02202 Brassica carinata HOM05D000496 ORTHO05D000411 9.6e-06 54.7 98 26.5
BcaC01g06924 Brassica carinata HOM05D000496 ORTHO05D000411 9.6e-06 54.7 79 35.4
BolC7t42873H Brassica oleracea HOM05D000496 ORTHO05D000411 9.6e-06 54.7 108 30.6


User provided reference genes

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