Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g26145 Brassica carinata HOM05D000888 ORTHO05D000740 5.8e-115 417.5 205 100.0
A04p18990 Brassica napus HOM05D000888 ORTHO05D000740 6.1e-24 115.2 67 82.1
BraA04t17500Z Brassica rapa HOM05D000888 ORTHO05D000740 5.2e-23 112.1 67 82.1
BcaC02g08431 Brassica carinata HOM05D000888 ORTHO05D000740 7.5e-22 108.2 62 85.5
C04p54280 Brassica napus HOM05D000888 ORTHO05D000740 7.5e-22 108.2 62 85.5
BolC4t26975H Brassica oleracea HOM05D000888 ORTHO05D000740 7.5e-22 108.2 62 85.5
AL4G15540 Arabidopsis lyrata HOM05D000888 ORTHO05D000740 2.4e-20 103.2 214 37.4
AT4G00260 Arabidopsis thaliana HOM05D000888 ORTHO05D000740 4.5e-19 99.0 213 37.1
Thhalv10000111m.g Eutrema salsugineum HOM05D000888 ORTHO05D000740 2.9e-18 96.3 216 35.6
AL4G15670 Arabidopsis lyrata HOM05D000888 ORTHO05D000740 3.8e-18 95.9 209 35.9
AT2G24645 Arabidopsis thaliana HOM05D000888 ORTHO05D000740 3.2e-17 92.8 175 40.0
Sp4g03640 Schrenkiella parvula HOM05D000888 ORTHO05D011624 3.6e-16 89.4 205 33.7
AL4G15320 Arabidopsis lyrata HOM05D000888 ORTHO05D000740 6.1e-16 88.6 218 34.9
A04p19040 Brassica napus HOM05D000888 ORTHO05D000740 8.8e-15 84.7 197 33.5
Carub.0004s0405 Capsella rubella HOM05D000888 ORTHO05D000740 3.4e-14 82.8 208 30.3
BcaB06g26671 Brassica carinata HOM05D000888 ORTHO05D000740 4.4e-14 82.4 180 34.4
A03p17770 Brassica napus HOM05D000888 ORTHO05D000740 4.4e-14 82.4 62 66.1
BraA03t11041Z Brassica rapa HOM05D000888 ORTHO05D000740 4.4e-14 82.4 62 66.1
Carub.0004s0425 Capsella rubella HOM05D000888 ORTHO05D000740 4.4e-14 82.4 60 65.0
C03p20850 Brassica napus HOM05D000888 ORTHO05D000740 7.5e-14 81.6 63 68.3
C04p54310 Brassica napus HOM05D000888 ORTHO05D000740 3.7e-13 79.3 207 32.4
Sp4g03630 Schrenkiella parvula HOM05D000888 ORTHO05D000740 1.1e-12 77.8 61 63.9
BolC4t26976H Brassica oleracea HOM05D000888 ORTHO05D000740 3.1e-12 76.3 196 32.7
Thhalv10000515m.g Eutrema salsugineum HOM05D000888 ORTHO05D000740 3.1e-12 76.3 62 67.7
Thhalv10028330m.g Eutrema salsugineum HOM05D000888 ORTHO05D000740 3.1e-12 76.3 62 62.9
A04p19010 Brassica napus HOM05D000888 ORTHO05D000740 7.8e-11 71.6 185 32.4
BraA04t17501Z Brassica rapa HOM05D000888 ORTHO05D000740 1.0e-10 71.2 61 55.7
C08p39110 Brassica napus HOM05D000888 ORTHO05D000740 3.8e-10 69.3 73 56.2
BolC8t51484H Brassica oleracea HOM05D000888 ORTHO05D000740 3.8e-10 69.3 73 56.2
BcaB01g02993 Brassica carinata HOM05D000888 ORTHO05D011624 5.0e-10 68.9 62 56.5
CARHR117280 Cardamine hirsuta HOM05D000888 ORTHO05D000740 3.3e-09 66.2 206 29.6
Sp4g03720 Schrenkiella parvula HOM05D000888 ORTHO05D000740 3.3e-09 66.2 62 58.1
BraA04t17499Z Brassica rapa HOM05D000888 ORTHO05D000740 1.2e-08 64.3 74 52.7
BcaC07g40912 Brassica carinata HOM05D000888 ORTHO05D000740 3.6e-08 62.8 70 50.0
C04p54320 Brassica napus HOM05D000888 ORTHO05D000740 3.6e-08 62.8 61 54.1
BcaB06g27990 Brassica carinata HOM05D000888 ORTHO05D000740 6.1e-08 62.0 67 53.7
AL4G19670 Arabidopsis lyrata HOM05D000888 ORTHO05D000740 1.8e-07 60.5 61 57.4
BcaB06g27991 Brassica carinata HOM05D000888 ORTHO05D000740 1.8e-07 60.5 186 28.5
CARHR118610 Cardamine hirsuta HOM05D000888 ORTHO05D000740 5.2e-07 58.9 67 53.7
BolC3t14439H Brassica oleracea HOM05D000888 ORTHO05D000740 6.8e-07 58.5 48 66.7
Thhalv10028050m.g Eutrema salsugineum HOM05D000888 ORTHO05D000740 1.2e-06 57.8 207 30.0


User provided reference genes

Program Settings