Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g26137 Brassica carinata HOM05D004651 ORTHO05D005761 9.3e-29 129.4 61 100.0
BraA05t19275Z Brassica rapa HOM05D004651 ORTHO05D005761 6.1e-20 100.1 70 77.1
Thhalv10017449m.g Eutrema salsugineum HOM05D004651 ORTHO05D005761 6.1e-20 100.1 70 77.1
Sp4g24480 Schrenkiella parvula HOM05D004651 ORTHO05D005761 6.1e-20 100.1 70 77.1
A05p02830 Brassica napus HOM05D004651 ORTHO05D005761 1.3e-19 99.0 70 75.7
Carub.0005s2464 Capsella rubella HOM05D004651 ORTHO05D005761 1.3e-19 99.0 70 75.7
Thhalv10006322m.g Eutrema salsugineum HOM05D004651 ORTHO05D005761 1.3e-19 99.0 70 75.7
AL5G39450 Arabidopsis lyrata HOM05D004651 ORTHO05D005761 3.9e-19 97.4 70 74.3
AT3G57785 Arabidopsis thaliana HOM05D004651 ORTHO05D005761 6.7e-19 96.7 68 75.0
Aa31LG10G12520 Aethionema arabicum HOM05D004651 ORTHO05D005761 8.7e-19 96.3 70 72.9
Aa31LG1G23980 Aethionema arabicum HOM05D004651 ORTHO05D005761 1.1e-18 95.9 70 74.3
Carub.0004s2465 Capsella rubella HOM05D004651 ORTHO05D005761 1.5e-18 95.5 70 72.9
AL4G40670 Arabidopsis lyrata HOM05D004651 ORTHO05D005761 2.5e-18 94.7 70 72.9
AT2G42310 Arabidopsis thaliana HOM05D004651 ORTHO05D005761 2.5e-18 94.7 70 72.9
BcaNung04397 Brassica carinata HOM05D004651 ORTHO05D005761 2.5e-18 94.7 70 71.4
THA.LOC104802364 Tarenaya hassleriana HOM05D004651 ORTHO05D005761 4.3e-18 94.0 70 71.4
THA.LOC104819088 Tarenaya hassleriana HOM05D004651 ORTHO05D005761 4.3e-18 94.0 70 71.4
BcaC02g07250 Brassica carinata HOM05D004651 ORTHO05D005761 9.7e-18 92.8 70 74.3
A04p32130 Brassica napus HOM05D004651 ORTHO05D005761 9.7e-18 92.8 70 74.3
C04p69620 Brassica napus HOM05D004651 ORTHO05D005761 9.7e-18 92.8 70 74.3
BolC4t28461H Brassica oleracea HOM05D004651 ORTHO05D005761 9.7e-18 92.8 70 74.3
BraA04t18667Z Brassica rapa HOM05D004651 ORTHO05D005761 9.7e-18 92.8 70 74.3
BcaB06g29236 Brassica carinata HOM05D004651 ORTHO05D005761 1.3e-17 92.4 72 72.2
BcaC02g07246 Brassica carinata HOM05D004651 ORTHO05D005761 1.3e-17 92.4 72 72.2
BcaC02g12474 Brassica carinata HOM05D004651 ORTHO05D005761 1.3e-17 92.4 70 74.3
C04p03440 Brassica napus HOM05D004651 ORTHO05D005761 1.3e-17 92.4 70 74.3
BolC4t21980H Brassica oleracea HOM05D004651 ORTHO05D005761 1.3e-17 92.4 70 74.3
BcaC01g05307 Brassica carinata HOM05D004651 ORTHO05D005761 4.8e-17 90.5 70 72.9
A03p23620 Brassica napus HOM05D004651 ORTHO05D005761 4.8e-17 90.5 70 72.9
BraA03t11578Z Brassica rapa HOM05D004651 ORTHO05D005761 4.8e-17 90.5 70 72.9
CARHR137350 Cardamine hirsuta HOM05D004651 ORTHO05D005761 1.4e-16 89.0 70 70.0
Sp5g04900 Schrenkiella parvula HOM05D004651 ORTHO05D005761 1.8e-16 88.6 70 68.6
MELO3C026725.2 Cucumis melo HOM05D004651 ORTHO05D005761 3.4e-15 84.3 67 65.7
ClCG04G000490 Citrullus lanatus HOM05D004651 ORTHO05D005761 7.7e-15 83.2 67 64.2
DCAR_013570 Daucus carota HOM05D004651 ORTHO05D005761 7.7e-15 83.2 70 62.9
Sc19g0006860 Simmondsia chinensis HOM05D004651 ORTHO05D005761 7.7e-15 83.2 68 60.3
Hma1.2p1_0856F.1_g229150 Hydrangea macrophylla HOM05D004651 ORTHO05D005761 1.0e-14 82.8 66 63.6
Sabra16G0055100 Salix brachista HOM05D004651 ORTHO05D005761 1.0e-14 82.8 67 62.7
CSS0019774 Camellia sinensis var. sinensis HOM05D004651 ORTHO05D005761 1.3e-14 82.4 68 63.2
CSS0028305 Camellia sinensis var. sinensis HOM05D004651 ORTHO05D005761 1.3e-14 82.4 68 63.2
Sed0027459 Sechium edule HOM05D004651 ORTHO05D005761 1.3e-14 82.4 67 65.7
HanXRQChr13g0391011 Helianthus annuus HOM05D004651 ORTHO05D005761 1.7e-14 82.0 71 60.6
Potri.016G051400 Populus trichocarpa HOM05D004651 ORTHO05D005761 1.7e-14 82.0 67 61.2
Manes.09G030500 Manihot esculenta HOM05D004651 ORTHO05D005761 2.9e-14 81.3 64 67.2
Nn2g15489 Nelumbo nucifera HOM05D004651 ORTHO05D005761 2.9e-14 81.3 69 59.4
CDE05G0104 Ceratophyllum demersum HOM05D004651 ORTHO05D005761 3.8e-14 80.9 70 61.4
Cc06_g16440 Coffea canephora HOM05D004651 ORTHO05D005761 3.8e-14 80.9 66 65.2
QL07p022191 Quercus lobata HOM05D004651 ORTHO05D005761 3.8e-14 80.9 68 63.2
CsaV3_4G011920 Cucumis sativus L. HOM05D004651 ORTHO05D005761 5.0e-14 80.5 67 64.2
MD07G1000900 Malus domestica HOM05D004651 ORTHO05D005761 5.0e-14 80.5 61 68.9
MD14G1064400 Malus domestica HOM05D004651 ORTHO05D005761 5.0e-14 80.5 61 68.9
Sabra06G0040200 Salix brachista HOM05D004651 ORTHO05D005761 6.5e-14 80.1 66 63.6
Cpa.g.sc85.122 Carica papaya HOM05D004651 ORTHO05D005761 8.5e-14 79.7 60 68.3
Potri.006G056900 Populus trichocarpa HOM05D004651 ORTHO05D005761 8.5e-14 79.7 66 63.6
HPP92_022788 Vanilla planifolia HOM05D004651 ORTHO05D005761 8.5e-14 79.7 68 58.8
Ah.04g152020 Amaranthus hybridus HOM05D004651 ORTHO05D005761 1.1e-13 79.3 63 63.5
CDE05G0718 Ceratophyllum demersum HOM05D004651 ORTHO05D005761 1.1e-13 79.3 70 60.0
COL.COLO4_28721 Corchorus olitorius HOM05D004651 ORTHO05D005761 1.1e-13 79.3 66 63.6
Gohir.D11G330800 Gossypium hirsutum HOM05D004651 ORTHO05D005761 1.1e-13 79.3 65 63.1
Gorai.007G361500 Gossypium raimondii HOM05D004651 ORTHO05D005761 1.1e-13 79.3 65 63.1
HanXRQChr10g0294281 Helianthus annuus HOM05D004651 ORTHO05D005761 1.1e-13 79.3 70 58.6
Gohir.D11G330900 Gossypium hirsutum HOM05D004651 ORTHO05D005761 1.4e-13 79.0 65 63.1
Lsat_1_v5_gn_9_27580 Lactuca sativa HOM05D004651 ORTHO05D005761 1.4e-13 79.0 71 60.6
C03p28150 Brassica napus HOM05D004651 ORTHO05D005761 1.9e-13 78.6 67 68.7
Haze_19923 Corylus avellana HOM05D004651 ORTHO05D005761 1.9e-13 78.6 66 63.6
Gorai.007G361600 Gossypium raimondii HOM05D004651 ORTHO05D005761 1.9e-13 78.6 65 63.1
Zm00001eb316630 Zea mays HOM05D004651 ORTHO05D005761 1.9e-13 78.6 69 59.4
Ciclev10006760m.g Citrus clementina HOM05D000001 ORTHO05D000003 2.5e-13 78.2 59 67.8
FvH4_6g22990 Fragaria vesca HOM05D004651 ORTHO05D005761 3.2e-13 77.8 66 63.6
Atru.chr1.949 Acer truncatum HOM05D004651 ORTHO05D005761 4.2e-13 77.4 59 67.8
FAN02G2491 Fragaria x ananassa HOM05D004651 ORTHO05D005761 4.2e-13 77.4 60 68.3
FAN05G1131 Fragaria x ananassa HOM05D004651 ORTHO05D005761 4.2e-13 77.4 66 63.6
FAN09G0537 Fragaria x ananassa HOM05D004651 ORTHO05D005761 4.2e-13 77.4 66 63.6
Gohir.A11G313600 Gossypium hirsutum HOM05D004651 ORTHO05D005761 4.2e-13 77.4 65 61.5
Oeu033769.1 Olea europaea HOM05D004651 ORTHO05D005761 4.2e-13 77.4 69 60.9
SGA_v2.0_scaffold105G30461 Striga asiatica HOM05D004651 ORTHO05D005761 4.2e-13 77.4 58 69.0
CANSAT80G2258 Cannabis sativa HOM05D004651 ORTHO05D005761 5.5e-13 77.0 72 61.1
CiPaw.09G033900 Carya illinoinensis HOM05D004651 ORTHO05D005761 5.5e-13 77.0 69 60.9
Dinv24113 Davidia involucrata HOM05D004651 ORTHO05D005761 5.5e-13 77.0 66 60.6
Glyma.02G174400 Glycine max HOM05D004651 ORTHO05D005761 5.5e-13 77.0 68 58.8
Lj5g0006028 Lotus japonicus HOM05D004651 ORTHO05D005761 5.5e-13 77.0 69 60.9
Manes.08G047600 Manihot esculenta HOM05D004651 ORTHO05D005761 5.5e-13 77.0 64 65.6
Actinidia38568 Actinidia chinensis HOM05D004651 ORTHO05D005761 7.2e-13 76.6 66 59.1
arahy.Tifrunner.gnm1.ann1.F3K4LC Arachis hypogaea HOM05D005399 ORTHO05D006347 7.2e-13 76.6 63 63.5
MBI01_g38800_MAGBIO Magnolia biondii HOM05D004651 ORTHO05D005761 7.2e-13 76.6 65 58.5
Phvul.007G256600 Phaseolus vulgaris HOM05D004651 ORTHO05D005761 7.2e-13 76.6 70 62.9
Thecc.05G165000 Theobroma cacao HOM05D004651 ORTHO05D005761 7.2e-13 76.6 63 63.5
EL10Ac3g06986 Beta vulgaris HOM05D004651 ORTHO05D005761 9.4e-13 76.3 69 60.9
Duzib128G1036 Durio zibethinus HOM05D004651 ORTHO05D005761 9.4e-13 76.3 62 64.5
Migut.J01795 Erythranthe guttata HOM05D004651 ORTHO05D005761 9.4e-13 76.3 66 62.1
SGA_v2.0_scaffold94G28447 Striga asiatica HOM05D004651 ORTHO05D005761 9.4e-13 76.3 62 64.5
Aqoxy2G00117 Aquilegia oxysepala HOM05D004651 ORTHO05D005761 1.2e-12 75.9 59 64.4
CiPaw.10G029700 Carya illinoinensis HOM05D004651 ORTHO05D005761 1.2e-12 75.9 69 59.4
Gohir.A11G313700 Gossypium hirsutum HOM05D004651 ORTHO05D005761 1.2e-12 75.9 65 61.5
RcHm_v2.0_Chr3g0480781 Rosa chinensis HOM05D004651 ORTHO05D005761 1.2e-12 75.9 66 62.1
Sed0009176 Sechium edule HOM05D004651 ORTHO05D005761 1.2e-12 75.9 68 58.8
TPR.G25632 Trifolium pratense HOM05D004651 ORTHO05D005761 1.2e-12 75.9 67 61.2
Ah.13g076160 Amaranthus hybridus HOM05D004651 ORTHO05D005761 1.6e-12 75.5 65 56.9
Cfa016877 Carpinus fangiana HOM05D004651 ORTHO05D005761 1.6e-12 75.5 66 62.1
Dinv18101 Davidia involucrata HOM05D000001 ORTHO05D000003 1.6e-12 75.5 70 62.9
Glyma.10G093900 Glycine max HOM05D004651 ORTHO05D005761 1.6e-12 75.5 63 61.9
Lalb_Chr02g0159821 Lupinus albus HOM05D004651 ORTHO05D005761 1.6e-12 75.5 70 60.0
Lalb_Chr21g0319241 Lupinus albus HOM05D004651 ORTHO05D005761 1.6e-12 75.5 70 58.6
MD12G1064300 Malus domestica HOM05D004651 ORTHO05D005761 1.6e-12 75.5 68 63.2
TWI34G0893 Tripterygium wilfordii HOM05D004651 ORTHO05D005761 1.6e-12 75.5 66 59.1
TWI34G1227 Tripterygium wilfordii HOM05D004651 ORTHO05D005761 1.6e-12 75.5 66 59.1
Zm00001eb034850 Zea mays HOM05D004651 ORTHO05D005761 1.6e-12 75.5 68 55.9
MSTRG.6460 Avicennia marina HOM05D004651 ORTHO05D005761 2.1e-12 75.1 65 61.5
Duzib093G1593 Durio zibethinus HOM05D004651 ORTHO05D005761 2.7e-12 74.7 69 62.3
ATR0605G299 Amborella trichopoda HOM05D004651 ORTHO05D005761 3.6e-12 74.3 66 56.1
Eucgr.A02412 Eucalyptus grandis HOM05D000001 ORTHO05D000003 3.6e-12 74.3 59 64.4
AUR62024379 Chenopodium quinoa HOM05D004651 ORTHO05D005761 4.6e-12 73.9 65 55.4
AUR62025977 Chenopodium quinoa HOM05D004651 ORTHO05D005761 4.6e-12 73.9 65 55.4
PGR004G2434 Punica granatum HOM05D004651 ORTHO05D005761 4.6e-12 73.9 59 64.4
ECA236G1810 Erigeron canadensis HOM05D004651 ORTHO05D005761 6.1e-12 73.6 69 56.5
Nitab4.5_0001347g0050 Nicotiana tabacum HOM05D004651 ORTHO05D005761 6.1e-12 73.6 68 57.4
Os09g0487500 Oryza sativa ssp. japonica HOM05D004651 ORTHO05D005761 6.1e-12 73.6 62 61.3
Peaxi162Scf00406g00069 Petunia axillaris HOM05D004651 ORTHO05D005761 6.1e-12 73.6 60 61.7
Peaxi162Scf00285g00014 Petunia axillaris HOM05D004651 ORTHO05D005761 7.9e-12 73.2 61 62.3
SHI26332 Sapria himalayana HOM05D004651 ORTHO05D005761 7.9e-12 73.2 60 63.3
CAN.G358.117 Capsicum annuum HOM05D004651 ORTHO05D005761 1.0e-11 72.8 58 63.8
Solyc02g085540.1 Solanum lycopersicum HOM05D004651 ORTHO05D005761 1.0e-11 72.8 58 63.8
Sopen02g030210 Solanum pennellii HOM05D004651 ORTHO05D005761 1.0e-11 72.8 58 63.8
PGSC0003DMG400012662 Solanum tuberosum HOM05D004651 ORTHO05D005761 1.0e-11 72.8 58 63.8
Ca_04847_v3 Cicer arietinum L. HOM05D004651 ORTHO05D005761 1.4e-11 72.4 67 58.2
Prupe.7G069800 Prunus persica HOM05D004651 ORTHO05D005761 1.4e-11 72.4 68 61.8
Lsat_1_v5_gn_5_163881 Lactuca sativa HOM05D006723 ORTHO05D008194 2.3e-11 71.6 69 55.1
Rhsim03G0011100 Rhododendron simsii HOM05D004651 ORTHO05D005761 2.3e-11 71.6 71 57.7
ATR0605G353 Amborella trichopoda HOM05D004651 ORTHO05D005761 3.0e-11 71.2 66 53.0
Nitab4.5_0000603g0080 Nicotiana tabacum HOM05D004651 ORTHO05D005761 3.0e-11 71.2 58 62.1
Nitab4.5_0003477g0030 Nicotiana tabacum HOM05D004651 ORTHO05D005761 3.0e-11 71.2 58 62.1
Psat6g130960 Pisum sativum HOM05D004651 ORTHO05D005761 3.0e-11 71.2 69 56.5
TWI60G1376 Tripterygium wilfordii HOM05D004651 ORTHO05D005761 3.0e-11 71.2 66 59.1
TAR623G0603 Trochodendron aralioides HOM05D004651 ORTHO05D005761 3.0e-11 71.2 72 56.9
Nitab4.5_0004063g0110 Nicotiana tabacum HOM05D004651 ORTHO05D005761 8.8e-11 69.7 68 55.9
GSVIVG01033348001 Vitis vinifera HOM05D000001 ORTHO05D000003 1.5e-10 68.9 62 59.7
Medtr1g059290 Medicago truncatula HOM05D004651 ORTHO05D005761 2.6e-10 68.2 66 56.1
Os08g0505001 Oryza sativa ssp. japonica HOM05D004651 ORTHO05D005761 2.6e-10 68.2 60 56.7
RcHm_v2.0_Chr5g0057691 Rosa chinensis HOM05D004651 ORTHO05D005761 3.3e-10 67.8 66 57.6
Migut.K00065 Erythranthe guttata HOM05D004651 ORTHO05D005761 1.3e-09 65.9 62 58.1
PSO384G0298 Papaver somniferum HOM05D004651 ORTHO05D005761 2.8e-09 64.7 69 50.7
SEGI_06557 Sequoiadendron giganteum HOM05D004651 ORTHO05D005761 3.7e-09 64.3 59 55.9
CSS0043471 Camellia sinensis var. sinensis HOM05D004651 ORTHO05D005761 8.2e-09 63.2 69 49.3
PSO339G4089 Papaver somniferum HOM05D004651 ORTHO05D005761 8.2e-09 63.2 69 49.3
AagrBONN_evm.TU.Sc2ySwM_362.1672 Anthoceros agrestis HOM05D004651 ORTHO05D005761 3.1e-08 61.2 65 50.8
Mapoly0006s0067 Marchantia polymorpha HOM05D004651 ORTHO05D005761 1.7e-06 55.5 66 47.0
Pp3c3_16790 Physcomitrium patens HOM05D004651 ORTHO05D005761 2.9e-06 54.7 61 50.8
Aa31LG3G1100 Aethionema arabicum HOM05D004651 ORTHO05D005761 6.5e-06 53.5 34 79.4
Oeu038276.1 Olea europaea HOM05D004651 ORTHO05D005761 6.5e-06 53.5 51 56.9


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