Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g26090 Brassica carinata HOM05D007725 ORTHO05D009774 3.4e-56 221.5 116 100.0
BcaC02g11617 Brassica carinata HOM05D007725 ORTHO05D009774 4.4e-11 71.6 37 97.3
A05p28800 Brassica napus HOM05D007725 ORTHO05D009774 9.8e-11 70.5 37 94.6
C05p44210 Brassica napus HOM05D007725 ORTHO05D009774 9.8e-11 70.5 37 94.6
BolC5t33143H Brassica oleracea HOM05D007725 ORTHO05D009774 9.8e-11 70.5 37 94.6
Sp3g18200 Schrenkiella parvula HOM05D007725 ORTHO05D009774 3.7e-10 68.6 37 91.9
AL3G33870 Arabidopsis lyrata HOM05D007725 ORTHO05D009774 4.8e-10 68.2 37 91.9
Carub.0003s2010 Capsella rubella HOM05D007725 ORTHO05D009774 4.8e-10 68.2 37 91.9
Gohir.D11G287700 Gossypium hirsutum HOM05D007725 ORTHO05D009774 4.8e-10 68.2 104 47.1
AT3G20170 Arabidopsis thaliana HOM05D007725 ORTHO05D009774 1.1e-09 67.0 37 91.9
CARHR095760 Cardamine hirsuta HOM05D007725 ORTHO05D009774 1.4e-09 66.6 37 89.2
Thhalv10020642m.g Eutrema salsugineum HOM05D007725 ORTHO05D009774 1.8e-09 66.2 37 89.2
C03p50970 Brassica napus HOM05D007725 ORTHO05D009774 1.2e-08 63.5 37 86.5
BolC3t17381H Brassica oleracea HOM05D007725 ORTHO05D009774 1.2e-08 63.5 37 86.5
Aa31LG8G7000 Aethionema arabicum HOM05D007725 ORTHO05D009774 2.0e-08 62.8 37 86.5
BcaB04g19094 Brassica carinata HOM05D007725 ORTHO05D009774 2.7e-08 62.4 37 86.5
A03p41610 Brassica napus HOM05D007725 ORTHO05D009774 1.0e-07 60.5 37 83.8
BraA03t13314Z Brassica rapa HOM05D007725 ORTHO05D009774 1.0e-07 60.5 37 83.8
Cpa.g.sc12.189 Carica papaya HOM05D007725 ORTHO05D009774 3.8e-07 58.5 38 76.3
COL.COLO4_09793 Corchorus olitorius HOM05D007725 ORTHO05D009774 6.6e-07 57.8 117 41.9
Ciclev10008214m.g Citrus clementina HOM05D007725 ORTHO05D009774 8.6e-07 57.4 97 39.2
Duzib170G0716 Durio zibethinus HOM05D007725 ORTHO05D009774 1.5e-06 56.6 97 40.2
Manes.03G138100 Manihot esculenta HOM05D007725 ORTHO05D009774 1.9e-06 56.2 38 73.7
TPR.G1953 Trifolium pratense HOM05D007725 ORTHO05D009774 1.9e-06 56.2 114 43.9
Glyma.08G326100 Glycine max HOM05D007725 ORTHO05D009774 7.2e-06 54.3 37 73.0
Hma1.2p1_2796F.1_g328670 Hydrangea macrophylla HOM05D007725 ORTHO05D009774 9.5e-06 53.9 37 73.0


User provided reference genes

Program Settings