Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g26068 Brassica carinata HOM05D004203 ORTHO05D004830 1.4e-248 862.4 421 100.0
BcaC05g28375 Brassica carinata HOM05D004203 ORTHO05D004830 4.3e-234 814.3 421 93.6
BolC5t33177H Brassica oleracea HOM05D004203 ORTHO05D004830 4.3e-234 814.3 421 93.6
BraA05t21796Z Brassica rapa HOM05D004203 ORTHO05D004830 1.6e-233 812.4 419 93.3
A05p29130 Brassica napus HOM05D004203 ORTHO05D004830 6.3e-233 810.4 419 93.1
Sp3g18010 Schrenkiella parvula HOM05D004203 ORTHO05D004830 1.2e-228 796.2 426 91.1
Thhalv10020793m.g Eutrema salsugineum HOM05D004203 ORTHO05D004830 1.8e-227 792.3 426 89.9
AT3G19990 Arabidopsis thaliana HOM05D004203 ORTHO05D004830 5.1e-227 790.8 426 89.7
CARHR095520 Cardamine hirsuta HOM05D004203 ORTHO05D004830 8.8e-227 790.0 426 90.6
AL3G33640 Arabidopsis lyrata HOM05D004203 ORTHO05D004830 5.7e-226 787.3 426 89.2
Carub.0003s1989 Capsella rubella HOM05D004203 ORTHO05D004830 8.2e-225 783.5 427 88.8
BolC1t04373H Brassica oleracea HOM05D004203 ORTHO05D004830 3.1e-224 781.6 428 89.0
C01p44100 Brassica napus HOM05D004203 ORTHO05D004830 6.9e-224 780.4 428 88.8
BcaC09g48955 Brassica carinata HOM05D004203 ORTHO05D004830 1.5e-223 779.2 428 88.6
BcaB04g20673 Brassica carinata HOM05D004203 ORTHO05D004830 5.0e-222 774.2 425 88.9
BraA01t03555Z Brassica rapa HOM05D004203 ORTHO05D004830 1.4e-221 772.7 424 88.2
A01p34680 Brassica napus HOM05D004203 ORTHO05D004830 5.2e-219 764.2 424 87.3
Aa31LG8G6770 Aethionema arabicum HOM05D004203 ORTHO05D004830 1.7e-217 759.2 424 85.1
C05p44530 Brassica napus HOM05D004203 ORTHO05D004830 9.1e-216 753.4 421 87.4
THA.LOC104826512 Tarenaya hassleriana HOM05D004203 ORTHO05D004830 1.9e-197 692.6 419 79.0
Potri.007G001200 Populus trichocarpa HOM05D004203 ORTHO05D004830 1.2e-186 656.8 414 75.1
Gorai.013G067000 Gossypium raimondii HOM05D004203 ORTHO05D004830 7.5e-186 654.1 414 74.6
Sabra07G0000900 Salix brachista HOM05D004203 ORTHO05D004830 7.5e-186 654.1 413 74.8
Gohir.D13G059200 Gossypium hirsutum HOM05D004203 ORTHO05D004830 2.2e-185 652.5 414 74.4
Thecc.02G153000 Theobroma cacao HOM05D004203 ORTHO05D004830 3.7e-185 651.7 414 74.2
Ciclev10015311m.g Citrus clementina HOM05D004203 ORTHO05D004830 8.3e-185 650.6 413 73.6
Duzib248G1608 Durio zibethinus HOM05D004203 ORTHO05D004830 8.3e-185 650.6 414 73.9
Gohir.A13G062700 Gossypium hirsutum HOM05D004203 ORTHO05D004830 1.8e-184 649.4 414 73.9
Cpa.g.sc257.7 Carica papaya HOM05D004203 ORTHO05D004830 3.2e-184 648.7 414 73.7
CiPaw.15G000900 Carya illinoinensis HOM05D004203 ORTHO05D004830 3.2e-184 648.7 414 73.9
Atru.chr11.55 Acer truncatum HOM05D004203 ORTHO05D004830 5.4e-184 647.9 412 73.8
QL01p000433 Quercus lobata HOM05D004203 ORTHO05D004830 5.4e-184 647.9 428 73.4
DCAR_026874 Daucus carota HOM05D004203 ORTHO05D004830 2.0e-183 646.0 414 72.7
Peaxi162Scf00603g00031 Petunia axillaris HOM05D004203 ORTHO05D004830 2.3e-182 642.5 415 74.7
TAR623G0552 Trochodendron aralioides HOM05D004203 ORTHO05D004830 2.3e-182 642.5 423 72.3
COL.COLO4_33135 Corchorus olitorius HOM05D004203 ORTHO05D004830 6.6e-182 641.0 414 72.5
TWI74G0727 Tripterygium wilfordii HOM05D004203 ORTHO05D004830 1.1e-181 640.2 418 72.0
Actinidia13679 Actinidia chinensis HOM05D004203 ORTHO05D004830 1.5e-181 639.8 417 72.9
Hma1.2p1_0513F.1_g169570 Hydrangea macrophylla HOM05D004203 ORTHO05D004830 1.9e-181 639.4 415 71.8
Aqoxy3G04325 Aquilegia oxysepala HOM05D004203 ORTHO05D004830 7.3e-181 637.5 418 70.1
Oeu027932.1 Olea europaea HOM05D004203 ORTHO05D004830 2.8e-180 635.6 418 70.6
Haze_17403 Corylus avellana HOM05D004203 ORTHO05D004830 6.2e-180 634.4 419 72.3
Duzib132G1212 Durio zibethinus HOM05D004203 ORTHO05D004830 1.1e-179 633.6 414 71.5
Cfa018675 Carpinus fangiana HOM05D004203 ORTHO05D004830 3.1e-179 632.1 417 72.9
Manes.04G161600 Manihot esculenta HOM05D004203 ORTHO05D004830 4.0e-179 631.7 414 71.0
AUR62032903 Chenopodium quinoa HOM05D004203 ORTHO05D004830 4.4e-178 628.2 414 70.5
VMungo0900G0001 Vigna mungo HOM05D004203 ORTHO05D004830 4.4e-178 628.2 421 70.8
Atru.chr11.58 Acer truncatum HOM05D004203 ORTHO05D004830 5.8e-178 627.9 404 73.0
CSS0042488 Camellia sinensis var. sinensis HOM05D004203 ORTHO05D004830 8.3e-177 624.0 414 71.5
ClCG01G007960 Citrullus lanatus HOM05D004203 ORTHO05D004830 2.4e-176 622.5 414 69.8
CAN.G143.62 Capsicum annuum HOM05D004203 ORTHO05D004830 3.2e-176 622.1 415 71.6
Phvul.003G000800 Phaseolus vulgaris HOM05D004203 ORTHO05D004830 3.2e-176 622.1 421 70.1
PGSC0003DMG400000979 Solanum tuberosum HOM05D004203 ORTHO05D004830 3.2e-176 622.1 415 72.3
CANSAT78G1232 Cannabis sativa HOM05D004203 ORTHO05D004830 4.1e-176 621.7 428 69.9
Eucgr.G02607 Eucalyptus grandis HOM05D004203 ORTHO05D004830 9.2e-176 620.5 417 69.5
EL10Ac9g23011 Beta vulgaris HOM05D004203 ORTHO05D004830 2.0e-175 619.4 412 69.9
Sopen11g002260 Solanum pennellii HOM05D004203 ORTHO05D004830 2.0e-175 619.4 425 71.1
Eucgr.L03404 Eucalyptus grandis HOM05D004203 ORTHO05D004830 6.0e-175 617.8 419 69.2
Lalb_Chr17g0337651 Lupinus albus HOM05D004203 ORTHO05D004830 1.0e-174 617.1 414 71.3
MD13G1001600 Malus domestica HOM05D004203 ORTHO05D004830 1.3e-174 616.7 434 67.5
Eucgr.G02598 Eucalyptus grandis HOM05D004203 ORTHO05D004830 1.7e-174 616.3 419 69.2
PSO063G7450 Papaver somniferum HOM05D004203 ORTHO05D004830 3.9e-174 615.1 414 69.8
PSO782G5227 Papaver somniferum HOM05D004203 ORTHO05D004830 6.6e-174 614.4 431 68.2
PGR142G4147 Punica granatum HOM05D004203 ORTHO05D004830 6.6e-174 614.4 421 70.3
Nitab4.5_0001803g0070 Nicotiana tabacum HOM05D004203 ORTHO05D004830 1.1e-173 613.6 413 70.9
AUR62017749 Chenopodium quinoa HOM05D004203 ORTHO05D004830 1.5e-173 613.2 410 69.3
Glyma.09G285700 Glycine max HOM05D004203 ORTHO05D004830 7.3e-173 610.9 426 69.2
Nitab4.5_0001018g0120 Nicotiana tabacum HOM05D004203 ORTHO05D004830 7.3e-173 610.9 413 71.2
MBI06_g12559_MAGBIO Magnolia biondii HOM05D004203 ORTHO05D004830 2.1e-172 609.4 414 70.5
Dinv37943 Davidia involucrata HOM05D004203 ORTHO05D004830 2.8e-172 609.0 416 71.6
Medtr0365s0010 Medicago truncatula HOM05D004203 ORTHO05D004830 1.8e-171 606.3 425 69.2
Cc11_g04600 Coffea canephora HOM05D004203 ORTHO05D004830 2.3e-171 605.9 414 67.6
Rhsim02G0210900 Rhododendron simsii HOM05D004203 ORTHO05D004830 4.0e-171 605.1 421 68.9
CsaV3_5G021930 Cucumis sativus L. HOM05D004203 ORTHO05D004830 8.9e-171 604.0 415 68.2
CDE04G2894 Ceratophyllum demersum HOM05D004203 ORTHO05D004830 1.2e-170 603.6 414 67.1
MELO3C005084.2 Cucumis melo HOM05D004203 ORTHO05D004830 5.8e-170 601.3 415 67.2
Prupe.1G350900 Prunus persica HOM05D004203 ORTHO05D004830 7.5e-170 600.9 439 66.1
Psat6g100840 Pisum sativum HOM05D004203 ORTHO05D004830 2.2e-169 599.4 428 67.8
Hund24393 Selenicereus undatus HOM05D004203 ORTHO05D004830 1.4e-168 596.7 418 68.4
Cc11_g04630 Coffea canephora HOM05D004203 ORTHO05D004830 3.2e-168 595.5 414 66.2
Lsat_1_v5_gn_3_35621 Lactuca sativa HOM05D004203 ORTHO05D004830 6.6e-166 587.8 416 68.0
Lj2g0024262 Lotus japonicus HOM05D004203 ORTHO05D004830 9.5e-165 583.9 418 68.4
Gorai.013G066900 Gossypium raimondii HOM05D004203 ORTHO05D004830 1.2e-164 583.6 425 64.5
Gohir.D13G059100 Gossypium hirsutum HOM05D004203 ORTHO05D004830 2.1e-164 582.8 425 64.2
Ca_12360_v3 Cicer arietinum L. HOM05D004203 ORTHO05D004830 4.7e-164 581.6 423 67.6
Ca_12363_v3 Cicer arietinum L. HOM05D004203 ORTHO05D004830 4.7e-164 581.6 423 67.6
ClCG01G007980 Citrullus lanatus HOM05D004203 ORTHO05D004830 1.4e-163 580.1 407 66.3
Sed0024681 Sechium edule HOM05D004203 ORTHO05D004830 5.2e-163 578.2 422 64.7
FvH4_4g37300 Fragaria vesca HOM05D004203 ORTHO05D004830 1.5e-162 576.6 414 66.7
Eucgr.G02596 Eucalyptus grandis HOM05D004203 ORTHO05D004830 1.1e-160 570.5 417 65.5
RcHm_v2.0_Chr4g0447121 Rosa chinensis HOM05D004203 ORTHO05D004830 2.4e-160 569.3 414 64.5
Migut.O00611 Erythranthe guttata HOM05D004203 ORTHO05D004830 3.2e-160 568.9 415 66.7
MSTRG.8095 Avicennia marina HOM05D004203 ORTHO05D004830 4.1e-160 568.5 418 67.2
FAN17G0196 Fragaria x ananassa HOM05D004203 ORTHO05D004830 4.1e-160 568.5 414 66.2
ECA246G1911 Erigeron canadensis HOM05D004203 ORTHO05D004830 1.6e-159 566.6 419 67.5
HanXRQChr15g0472171 Helianthus annuus HOM05D004203 ORTHO05D004830 1.6e-159 566.6 419 66.1
SHI10741 Sapria himalayana HOM05D004203 ORTHO05D004830 2.1e-159 566.2 397 67.0
Migut.L00789 Erythranthe guttata HOM05D004203 ORTHO05D004830 3.5e-159 565.5 416 66.1
Eucgr.G02594 Eucalyptus grandis HOM05D004203 ORTHO05D004830 1.7e-158 563.1 419 63.5
SalBow2G2162 Salvia bowleyana HOM05D004203 ORTHO05D004830 1.7e-158 563.1 418 65.3
Lsat_1_v5_gn_4_27720 Lactuca sativa HOM05D004203 ORTHO05D004830 1.9e-157 559.7 416 63.0
ECA246G0515 Erigeron canadensis HOM05D004203 ORTHO05D004830 3.6e-156 555.4 417 65.2
unitig_749.g13343 Utricularia gibba HOM05D004203 ORTHO05D004830 7.6e-154 547.7 418 64.6
ECA234G3608 Erigeron canadensis HOM05D004203 ORTHO05D004830 5.4e-152 541.6 412 60.4
QL01p000454 Quercus lobata HOM05D004203 ORTHO05D004830 3.5e-151 538.9 414 65.2
Eucgr.G02595 Eucalyptus grandis HOM05D004203 ORTHO05D004830 1.3e-150 537.0 420 61.4
HPP92_022176 Vanilla planifolia HOM05D004203 ORTHO05D004830 8.1e-148 527.7 411 60.8
Lsat_1_v5_gn_8_139521 Lactuca sativa HOM05D004203 ORTHO05D004830 1.1e-147 527.3 414 58.9
HanXRQChr17g0559591 Helianthus annuus HOM05D004203 ORTHO05D004830 1.7e-145 520.0 414 57.2
QL01p000540 Quercus lobata HOM05D004203 ORTHO05D004830 4.9e-145 518.5 358 71.2
ATR0124G027 Amborella trichopoda HOM05D004203 ORTHO05D004830 6.4e-145 518.1 414 59.9
Os02g0828200 Oryza sativa ssp. japonica HOM05D004203 ORTHO05D004830 7.1e-144 514.6 413 58.6
HanXRQChr09g0251301 Helianthus annuus HOM05D004203 ORTHO05D004830 1.2e-143 513.8 414 56.3
HPP92_005409 Vanilla planifolia HOM05D004203 ORTHO05D004830 2.3e-142 509.6 418 60.8
Zm00001eb259360 Zea mays HOM05D004203 ORTHO05D004830 3.0e-142 509.2 413 57.9
ECA233G1072 Erigeron canadensis HOM05D004203 ORTHO05D004830 2.0e-138 496.5 395 58.0
Os02g0828500 Oryza sativa ssp. japonica HOM05D004203 ORTHO05D004830 2.1e-135 486.5 416 56.5
SEGI_02027 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 8.7e-134 481.1 449 51.4
MD16G1004500 Malus domestica HOM05D004203 ORTHO05D004830 2.3e-126 456.4 406 57.6
TPR.G34239 Trifolium pratense HOM05D004203 ORTHO05D004830 1.0e-121 441.0 310 70.3
AagrBONN_evm.TU.Sc2ySwM_368.1197 Anthoceros agrestis HOM05D004203 ORTHO05D004830 8.5e-121 438.0 443 49.4
Thecc.02G152900 Theobroma cacao HOM05D004203 ORTHO05D004830 1.8e-118 430.3 298 68.1
Sc08g0004160 Simmondsia chinensis HOM05D004203 ORTHO05D004830 2.6e-109 399.8 255 72.2
GSVIVG01034366001 Vitis vinifera HOM05D004203 ORTHO05D004830 3.3e-109 399.4 427 51.1
SMO117G0084 Selaginella moellendorffii HOM05D004203 ORTHO05D004830 9.7e-109 397.9 413 47.7
GSVIVG01034368001 Vitis vinifera HOM05D004203 ORTHO05D004830 6.3e-108 395.2 427 51.3
Mapoly0080s0012 Marchantia polymorpha HOM05D004203 ORTHO05D004830 2.4e-107 393.3 414 45.7
Pp3c17_21640 Physcomitrium patens HOM05D004203 ORTHO05D004830 1.2e-106 391.0 409 46.0
SEGI_01054 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 1.4e-102 377.5 350 51.1
Cre16.g671500 Chlamydomonas reinhardtii HOM05D004203 ORTHO05D004830 1.6e-90 337.4 422 41.9
Lj3A845T90 Lonicera japonica HOM05D004203 ORTHO05D004830 5.2e-86 322.4 245 67.3
Prupe.1G351100 Prunus persica HOM05D004203 ORTHO05D004830 5.2e-86 322.4 239 64.9
Medtr0400s0020 Medicago truncatula HOM05D004203 ORTHO05D004830 1.3e-84 317.8 227 67.8
SEGI_32381 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 3.3e-80 303.1 296 49.0
BcaB08g37041 Brassica carinata HOM05D004203 ORTHO05D004830 9.8e-61 238.4 146 82.2
BcaB06g27490 Brassica carinata HOM05D004203 ORTHO05D004830 1.9e-56 224.2 158 74.1
Atru.chr11.60 Acer truncatum HOM05D004203 ORTHO05D004830 1.4e-54 218.0 161 65.8
Lj3C845T9 Lonicera japonica HOM05D004203 ORTHO05D004830 4.4e-53 213.0 158 65.2
Sc08g0004150 Simmondsia chinensis HOM05D004203 ORTHO05D004830 1.2e-47 194.9 139 61.2
SEGI_16211 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 1.4e-46 191.4 314 34.7
Sc08g0004170 Simmondsia chinensis HOM05D004203 ORTHO05D004830 2.4e-43 180.6 132 59.1
BcaB06g27488 Brassica carinata HOM05D004203 ORTHO05D004830 1.4e-38 164.9 100 81.0
Solyc11g006360.1 Solanum lycopersicum HOM05D004203 ORTHO05D004830 1.4e-38 164.9 114 65.8
SEGI_00877 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 4.0e-38 163.3 215 46.0
FAN12G3670 Fragaria x ananassa HOM05D004203 ORTHO05D004830 7.1e-35 152.5 159 52.8
Atru.chr11.61 Acer truncatum HOM05D004203 ORTHO05D004830 2.7e-34 150.6 129 63.6
BcaB06g27492 Brassica carinata HOM05D004203 ORTHO05D004830 2.3e-33 147.5 92 79.3
BcaC07g39871 Brassica carinata HOM05D004203 ORTHO05D004830 1.1e-32 145.2 79 89.9
BcaB06g26576 Brassica carinata HOM05D004203 ORTHO05D004830 1.1e-30 138.7 78 84.6
PRCOL_00005471 Prasinoderma coloniale HOM05D004553 ORTHO05D005426 5.3e-30 136.3 408 26.0
BcaB08g37040 Brassica carinata HOM05D004203 ORTHO05D004830 1.6e-26 124.8 67 89.6
Sc08g0004180 Simmondsia chinensis HOM05D004203 ORTHO05D004830 1.5e-21 108.2 67 74.6
BcaB06g27495 Brassica carinata HOM05D004203 ORTHO05D004830 1.4e-19 101.7 60 78.3
Os03g0251425 Oryza sativa ssp. japonica HOM05D004203 ORTHO05D004830 2.5e-19 100.9 91 56.0
BcaB06g27494 Brassica carinata HOM05D004203 ORTHO05D004830 4.2e-19 100.1 62 79.0
BcaC07g38231 Brassica carinata HOM05D004203 ORTHO05D004830 2.5e-16 90.9 58 84.5
BcaB06g26577 Brassica carinata HOM05D004203 ORTHO05D004830 1.6e-15 88.2 55 85.5
Sc08g0004140 Simmondsia chinensis HOM05D004203 ORTHO05D004830 1.6e-15 88.2 84 50.0
SEGI_08354 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 2.4e-14 84.3 68 52.9
A05p19690 Brassica napus HOM05D004203 ORTHO05D004830 1.7e-12 78.2 51 82.4
GSVIVG01034364001 Vitis vinifera HOM05D004203 ORTHO05D004830 1.9e-11 74.7 73 47.9
BcaB05g24942 Brassica carinata HOM05D004203 ORTHO05D004830 3.0e-09 67.4 51 70.6
C06p51380 Brassica napus HOM05D004203 ORTHO05D004830 3.0e-09 67.4 43 83.7
COL.COLO4_33125 Corchorus olitorius HOM05D004203 ORTHO05D004830 8.7e-09 65.9 39 69.2
MCO08G255 Micromonas commoda HOM05D004203 ORTHO05D004830 2.5e-08 64.3 106 34.9
Pp3c14_4390 Physcomitrium patens HOM05D004203 ORTHO05D004830 8.2e-07 59.3 72 37.5


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