Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g25896 Brassica carinata HOM05D000589 ORTHO05D001885 6.8e-30 133.3 64 100.0
BcaC05g25861 Brassica carinata HOM05D000589 ORTHO05D001885 1.0e-22 109.4 63 85.7
BcaC06g34173 Brassica carinata HOM05D000589 ORTHO05D001885 1.0e-22 109.4 63 85.7
BcaC09g51508 Brassica carinata HOM05D000589 ORTHO05D001885 1.5e-21 105.5 62 85.5
BcaC04g22605 Brassica carinata HOM05D000589 ORTHO05D001885 5.7e-21 103.6 63 81.0
BcaB03g15491 Brassica carinata HOM05D000589 ORTHO05D001885 9.8e-21 102.8 63 79.4
BcaB01g02011 Brassica carinata HOM05D000589 ORTHO05D001885 3.7e-20 100.9 63 76.2
BcaB04g20296 Brassica carinata HOM05D000589 ORTHO05D001885 2.4e-19 98.2 63 74.6
BcaB08g34473 Brassica carinata HOM05D000589 ORTHO05D001885 2.4e-19 98.2 61 78.7
BolC4t26960H Brassica oleracea HOM05D000589 ORTHO05D001885 2.0e-18 95.1 57 82.5
BcaC06g34714 Brassica carinata HOM05D000589 ORTHO05D001885 3.0e-17 91.3 75 65.3
BcaC09g48394 Brassica carinata HOM05D000589 ORTHO05D001885 3.9e-17 90.9 63 71.4
BcaC04g22355 Brassica carinata HOM05D000589 ORTHO05D001885 5.0e-17 90.5 63 71.4
BcaB03g15329 Brassica carinata HOM05D000589 ORTHO05D001885 1.1e-16 89.4 63 69.8
BcaC04g22143 Brassica carinata HOM05D000589 ORTHO05D001885 2.8e-15 84.7 59 67.8
BolC1t04845H Brassica oleracea HOM05D000589 ORTHO05D001885 1.4e-14 82.4 82 54.9
BraA01t03046Z Brassica rapa HOM05D000589 ORTHO05D001885 3.1e-14 81.3 64 62.5
BraA08t32605Z Brassica rapa HOM05D000589 ORTHO05D001885 3.1e-14 81.3 64 62.5
BolC6t38706H Brassica oleracea HOM05D000589 ORTHO05D001885 4.0e-14 80.9 64 60.9
BraA07t28350Z Brassica rapa HOM05D000589 ORTHO05D001885 8.9e-14 79.7 64 62.5
BcaC05g29003 Brassica carinata HOM05D000589 ORTHO05D001885 1.2e-13 79.3 63 63.5
BraA08t32774Z Brassica rapa HOM05D001498 ORTHO05D001885 1.2e-13 79.3 64 60.9
BcaC06g36688 Brassica carinata HOM05D001498 ORTHO05D001885 2.0e-13 78.6 64 60.9
BolC6t37491H Brassica oleracea HOM05D000589 ORTHO05D001885 2.0e-13 78.6 64 60.9
BraA02t07685Z Brassica rapa HOM05D000589 ORTHO05D001885 2.6e-13 78.2 75 58.7
BraA03t14502Z Brassica rapa HOM05D000589 ORTHO05D001885 2.6e-13 78.2 64 60.9
BraA08t32950Z Brassica rapa HOM05D000589 ORTHO05D001885 2.6e-13 78.2 64 60.9
BcaC01g05797 Brassica carinata HOM05D000589 ORTHO05D001885 3.4e-13 77.8 63 63.5
BolC3t12574H Brassica oleracea HOM05D000589 ORTHO05D001885 3.4e-13 77.8 75 58.7
BolC3t17893H Brassica oleracea HOM05D000589 ORTHO05D000401 3.4e-13 77.8 64 68.8
BcaB05g22907 Brassica carinata HOM05D000589 ORTHO05D001885 5.8e-13 77.0 63 61.9
BcaC03g16729 Brassica carinata HOM05D000589 ORTHO05D004260 5.8e-13 77.0 61 63.9
BolC3t19856H Brassica oleracea HOM05D000589 ORTHO05D000401 5.8e-13 77.0 68 63.2
BcaB07g32349 Brassica carinata HOM05D000589 ORTHO05D001885 9.8e-13 76.3 63 58.7
BcaC05g28348 Brassica carinata HOM05D000589 ORTHO05D001885 9.8e-13 76.3 63 60.3
BcaB06g26956 Brassica carinata HOM05D000589 ORTHO05D001885 1.3e-12 75.9 63 60.3
BcaC06g33454 Brassica carinata HOM05D000589 ORTHO05D001885 1.3e-12 75.9 63 58.7
BolC8t49419H Brassica oleracea HOM05D000589 ORTHO05D001885 1.7e-12 75.5 64 59.4
BcaC07g38282 Brassica carinata HOM05D000589 ORTHO05D001885 2.2e-12 75.1 63 58.7
BolC4t25125H Brassica oleracea HOM05D000589 ORTHO05D001885 2.2e-12 75.1 64 59.4
BolC9t54652H Brassica oleracea HOM05D000589 ORTHO05D001885 2.2e-12 75.1 64 59.4
C08p03150 Brassica napus HOM05D000930 ORTHO05D000748 2.9e-12 74.7 63 60.3
BolC9t55020H Brassica oleracea HOM05D000589 ORTHO05D001885 2.9e-12 74.7 64 59.4
BolC9t57315H Brassica oleracea HOM05D000589 ORTHO05D001885 2.9e-12 74.7 64 59.4
BcaB01g01573 Brassica carinata HOM05D000589 ORTHO05D001885 3.7e-12 74.3 63 60.3
BcaB05g21802 Brassica carinata HOM05D000589 ORTHO05D001885 3.7e-12 74.3 63 58.7
BcaB01g01311 Brassica carinata HOM05D000589 ORTHO05D001885 4.9e-12 73.9 64 59.4
BcaC06g33723 Brassica carinata HOM05D000589 ORTHO05D001885 4.9e-12 73.9 63 60.3
BcaC08g44374 Brassica carinata HOM05D001498 ORTHO05D008559 4.9e-12 73.9 64 59.4
BcaC02g08929 Brassica carinata HOM05D000589 ORTHO05D001885 8.3e-12 73.2 63 58.7
BcaC04g21586 Brassica carinata HOM05D000589 ORTHO05D001885 8.3e-12 73.2 63 55.6
BcaB05g24472 Brassica carinata HOM05D000589 ORTHO05D001885 1.1e-11 72.8 63 60.3
BcaB07g32905 Brassica carinata HOM05D000589 ORTHO05D001885 1.4e-11 72.4 64 64.1
BolC6t35247H Brassica oleracea HOM05D000589 ORTHO05D001885 3.2e-11 71.2 63 57.1
BcaC04g20928 Brassica carinata HOM05D000589 ORTHO05D001885 5.4e-11 70.5 63 57.1
BcaC05g25264 Brassica carinata HOM05D000589 ORTHO05D001885 5.4e-11 70.5 63 57.1
BcaB02g09937 Brassica carinata HOM05D000589 ORTHO05D001885 7.0e-11 70.1 66 57.6
BcaB08g36271 Brassica carinata HOM05D000589 ORTHO05D001885 7.0e-11 70.1 62 56.5
BcaNung04078 Brassica carinata HOM05D000589 ORTHO05D001885 7.0e-11 70.1 64 56.2
BcaB06g28242 Brassica carinata HOM05D000589 ORTHO05D001885 9.2e-11 69.7 64 56.2
BcaC01g03921 Brassica carinata HOM05D000589 ORTHO05D040045 9.2e-11 69.7 62 58.1
BcaC05g25328 Brassica carinata HOM05D000589 ORTHO05D001885 9.2e-11 69.7 63 55.6
BcaC07g38195 Brassica carinata HOM05D000589 ORTHO05D001885 9.2e-11 69.7 63 55.6
BolC3t18711H Brassica oleracea HOM05D000589 ORTHO05D040045 9.2e-11 69.7 62 56.5
BolC4t25876H Brassica oleracea HOM05D000589 ORTHO05D001885 9.2e-11 69.7 63 55.6
BcaC02g12351 Brassica carinata HOM05D000589 ORTHO05D001885 1.2e-10 69.3 63 55.6
BcaNung06643 Brassica carinata HOM05D000589 ORTHO05D094827 1.2e-10 69.3 71 57.7
BcaC02g08655 Brassica carinata HOM05D000589 ORTHO05D001885 1.6e-10 68.9 63 57.1
BcaB02g07028 Brassica carinata HOM05D000589 ORTHO05D001885 2.7e-10 68.2 64 56.2
BcaB06g26227 Brassica carinata HOM05D000589 ORTHO05D001885 2.7e-10 68.2 63 54.0
BolC6t36239H Brassica oleracea HOM05D000589 ORTHO05D001885 2.7e-10 68.2 60 58.3
BraA02t07620Z Brassica rapa HOM05D000589 ORTHO05D001885 2.7e-10 68.2 63 55.6
BcaC04g19451 Brassica carinata HOM05D000589 ORTHO05D001885 3.5e-10 67.8 64 57.8
BolC8t47336H Brassica oleracea HOM05D000589 ORTHO05D000401 3.5e-10 67.8 63 54.0
BcaC07g39835 Brassica carinata HOM05D000589 ORTHO05D001885 4.6e-10 67.4 64 56.2
BcaC08g44546 Brassica carinata HOM05D000589 ORTHO05D001885 4.6e-10 67.4 59 55.9
BcaB03g13920 Brassica carinata HOM05D000589 ORTHO05D001885 6.0e-10 67.0 63 54.0
BcaB06g25421 Brassica carinata HOM05D000589 ORTHO05D001885 6.0e-10 67.0 64 54.7
BcaC02g11767 Brassica carinata HOM05D000589 ORTHO05D001885 6.0e-10 67.0 63 52.4
BcaB01g01446 Brassica carinata HOM05D000589 ORTHO05D001885 7.8e-10 66.6 63 54.0
BcaB01g02139 Brassica carinata HOM05D000589 ORTHO05D001885 7.8e-10 66.6 63 54.0
BcaB04g18988 Brassica carinata HOM05D000589 ORTHO05D001885 7.8e-10 66.6 59 54.2
BcaC03g18153 Brassica carinata HOM05D000589 ORTHO05D001885 7.8e-10 66.6 63 54.0
BcaC09g50125 Brassica carinata HOM05D000589 ORTHO05D001885 7.8e-10 66.6 63 54.0
BolC1t02802H Brassica oleracea HOM05D000589 ORTHO05D000401 7.8e-10 66.6 63 54.0
BcaC05g25870 Brassica carinata HOM05D000589 ORTHO05D001885 1.3e-09 65.9 63 52.4
BcaC08g45829 Brassica carinata HOM05D000589 ORTHO05D001885 1.3e-09 65.9 63 52.4
BcaC01g05146 Brassica carinata HOM05D000589 ORTHO05D001885 1.7e-09 65.5 64 54.7
BcaC05g28209 Brassica carinata HOM05D000589 ORTHO05D001885 1.7e-09 65.5 63 54.0
BcaC07g37959 Brassica carinata HOM05D000589 ORTHO05D093878 1.7e-09 65.5 45 77.8
BcaB02g07279 Brassica carinata HOM05D000589 ORTHO05D001885 3.0e-09 64.7 68 55.9
BcaB02g09875 Brassica carinata HOM05D000589 ORTHO05D001885 3.0e-09 64.7 64 53.1
BcaC08g45577 Brassica carinata HOM05D000589 ORTHO05D001885 3.0e-09 64.7 64 54.7
BolC8t48273H Brassica oleracea HOM05D000589 ORTHO05D001885 3.0e-09 64.7 64 53.1
BcaB05g22170 Brassica carinata HOM05D000589 ORTHO05D001885 3.9e-09 64.3 68 51.5
BraA04t17042Z Brassica rapa HOM05D000589 ORTHO05D001885 3.9e-09 64.3 59 54.2
BolC8t49278H Brassica oleracea HOM05D000589 ORTHO05D001885 5.0e-09 63.9 59 54.2
BcaC01g00334 Brassica carinata HOM05D000589 ORTHO05D001885 8.6e-09 63.2 63 54.0
BolC7t42427H Brassica oleracea HOM05D000589 ORTHO05D001885 8.6e-09 63.2 59 54.2
BcaB05g24213 Brassica carinata HOM05D000589 ORTHO05D001885 1.1e-08 62.8 64 53.1
BcaB03g15647 Brassica carinata HOM05D000589 ORTHO05D001885 1.5e-08 62.4 64 51.6
BcaB05g22699 Brassica carinata HOM05D000589 ORTHO05D001885 1.9e-08 62.0 56 60.7
BcaC04g22653 Brassica carinata HOM05D000589 ORTHO05D016749 1.9e-08 62.0 57 54.4
BcaC06g35383 Brassica carinata HOM05D000589 ORTHO05D001885 1.9e-08 62.0 63 50.8
BcaC04g19792 Brassica carinata HOM05D000589 ORTHO05D001885 2.5e-08 61.6 63 50.8
BcaB02g07830 Brassica carinata HOM05D000589 ORTHO05D001885 3.3e-08 61.2 68 51.5
BcaB02g10869 Brassica carinata HOM05D000589 ORTHO05D001885 3.3e-08 61.2 59 52.5
BcaC04g22612 Brassica carinata HOM05D000589 ORTHO05D001885 3.3e-08 61.2 63 52.4
BcaB01g05554 Brassica carinata HOM05D000589 ORTHO05D001885 4.3e-08 60.8 59 52.5
BcaC05g28962 Brassica carinata HOM05D000589 ORTHO05D001885 4.3e-08 60.8 59 52.5
BolC1t01662H Brassica oleracea HOM05D000589 ORTHO05D001885 4.3e-08 60.8 55 54.5
BolC4t25855H Brassica oleracea HOM05D000589 ORTHO05D001885 4.3e-08 60.8 59 52.5
C03p80460 Brassica napus HOM05D000589 ORTHO05D001885 5.6e-08 60.5 55 54.5
C04p36710 Brassica napus HOM05D001498 ORTHO05D001885 5.6e-08 60.5 55 54.5
BcaC01g03078 Brassica carinata HOM05D001498 ORTHO05D008559 7.3e-08 60.1 55 56.4
BcaC08g45585 Brassica carinata HOM05D000589 ORTHO05D001885 9.5e-08 59.7 54 53.7
BcaC04g18907 Brassica carinata HOM05D000589 ORTHO05D001885 1.2e-07 59.3 57 50.9
BcaC01g00898 Brassica carinata HOM05D000589 ORTHO05D001885 1.6e-07 58.9 57 52.6
BcaC04g21787 Brassica carinata HOM05D000589 ORTHO05D001885 1.6e-07 58.9 63 52.4
BcaC06g35166 Brassica carinata HOM05D000589 ORTHO05D001885 1.6e-07 58.9 57 52.6
BcaC01g01963 Brassica carinata HOM05D000589 ORTHO05D001885 2.1e-07 58.5 57 52.6
BcaC02g08590 Brassica carinata HOM05D000589 ORTHO05D001885 2.1e-07 58.5 63 49.2
BcaC02g08679 Brassica carinata HOM05D000589 ORTHO05D001885 2.1e-07 58.5 55 52.7
BcaC05g25949 Brassica carinata HOM05D000589 ORTHO05D001885 2.1e-07 58.5 64 50.0
BcaC06g32032 Brassica carinata HOM05D000589 ORTHO05D001885 2.1e-07 58.5 64 51.6
BcaC06g33599 Brassica carinata HOM05D000589 ORTHO05D001885 2.8e-07 58.2 57 50.9
C02p53500 Brassica napus HOM05D001498 ORTHO05D001885 3.6e-07 57.8 54 53.7
BcaB06g27723 Brassica carinata HOM05D000589 ORTHO05D001885 4.7e-07 57.4 59 50.8
BcaC06g36449 Brassica carinata HOM05D001498 ORTHO05D008559 4.7e-07 57.4 55 54.5
BcaC07g40780 Brassica carinata HOM05D000589 ORTHO05D001885 4.7e-07 57.4 63 49.2
C08p17880 Brassica napus HOM05D001498 ORTHO05D001885 4.7e-07 57.4 55 52.7
BcaB06g27274 Brassica carinata HOM05D000589 ORTHO05D001885 6.2e-07 57.0 59 50.8
C01p30550 Brassica napus HOM05D000589 ORTHO05D001885 6.2e-07 57.0 55 52.7
BraA03t15289Z Brassica rapa HOM05D000589 ORTHO05D001885 6.2e-07 57.0 54 53.7
BcaB01g04884 Brassica carinata HOM05D000589 ORTHO05D001885 1.1e-06 56.2 57 49.1
BcaC09g48963 Brassica carinata HOM05D000589 ORTHO05D001885 1.1e-06 56.2 64 50.0
BolC9t59154H Brassica oleracea HOM05D000214 ORTHO05D000131 1.1e-06 56.2 63 49.2
BcaC03g15667 Brassica carinata HOM05D000589 ORTHO05D001885 1.4e-06 55.8 61 50.8
BcaC07g38292 Brassica carinata HOM05D000589 ORTHO05D001885 1.4e-06 55.8 57 50.9
BolC2t10463H Brassica oleracea HOM05D000589 ORTHO05D000401 1.4e-06 55.8 59 55.9
BolC8t48988H Brassica oleracea HOM05D000589 ORTHO05D001885 1.4e-06 55.8 55 52.7
BcaC03g16344 Brassica carinata HOM05D000589 ORTHO05D001885 2.3e-06 55.1 61 50.8
BcaC06g35854 Brassica carinata HOM05D002078 ORTHO05D010191 2.3e-06 55.1 57 50.9
BcaB03g14285 Brassica carinata HOM05D000589 ORTHO05D001885 3.1e-06 54.7 54 50.0
BcaB06g27778 Brassica carinata HOM05D000589 ORTHO05D001885 3.1e-06 54.7 57 52.6
BcaC03g14470 Brassica carinata HOM05D000589 ORTHO05D001885 3.1e-06 54.7 57 49.1
A09p34640 Brassica napus HOM05D000589 ORTHO05D001885 3.1e-06 54.7 54 53.7
BraA09t38531Z Brassica rapa HOM05D000589 ORTHO05D001885 3.1e-06 54.7 58 51.7
BcaC01g00765 Brassica carinata HOM05D000589 ORTHO05D096280 4.0e-06 54.3 67 49.3
BcaC03g15149 Brassica carinata HOM05D000589 ORTHO05D001885 5.2e-06 53.9 60 51.7
BolC8t47924H Brassica oleracea HOM05D000589 ORTHO05D000401 5.2e-06 53.9 57 50.9
BcaB01g01593 Brassica carinata HOM05D000589 ORTHO05D001885 6.8e-06 53.5 64 48.4
BcaB02g11474 Brassica carinata HOM05D000589 ORTHO05D013242 6.8e-06 53.5 54 51.9
BcaB05g22145 Brassica carinata HOM05D000589 ORTHO05D001885 6.8e-06 53.5 60 53.3
BcaB07g33413 Brassica carinata HOM05D000589 ORTHO05D001885 6.8e-06 53.5 54 51.9
BcaC08g42891 Brassica carinata HOM05D000044 ORTHO05D002654 6.8e-06 53.5 54 51.9


User provided reference genes

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