Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g25878 Brassica carinata HOM05D004345 ORTHO05D005192 1.2e-82 309.7 150 100.0
BolC5t33472H Brassica oleracea HOM05D004345 ORTHO05D005192 2.9e-47 192.2 103 92.2
C05p47630 Brassica napus HOM05D004345 ORTHO05D005192 3.2e-46 188.7 103 90.3
A05p31330 Brassica napus HOM05D004345 ORTHO05D005192 1.0e-44 183.7 106 85.8
BraA05t21971Z Brassica rapa HOM05D004345 ORTHO05D005192 1.0e-44 183.7 106 85.8
Sp3g16450 Schrenkiella parvula HOM05D004345 ORTHO05D005192 9.9e-40 167.2 106 81.1
Thhalv10020051m.g Eutrema salsugineum HOM05D004345 ORTHO05D005192 1.1e-35 153.7 107 75.7
AL3G31560 Arabidopsis lyrata HOM05D004345 ORTHO05D005192 2.0e-32 142.9 107 68.2
AT3G18310 Arabidopsis thaliana HOM05D004345 ORTHO05D005192 5.8e-32 141.4 105 69.5
C05p47510 Brassica napus HOM05D004345 ORTHO05D005192 5.8e-32 141.4 84 83.3
CARHR093680 Cardamine hirsuta HOM05D004345 ORTHO05D005192 2.4e-30 136.0 106 66.0
Carub.0003s1810 Capsella rubella HOM05D004345 ORTHO05D005192 1.8e-28 129.8 106 66.0
Aa31LG8G3600 Aethionema arabicum HOM05D004345 ORTHO05D005192 7.6e-24 114.4 99 60.6
THA.LOC104803578 Tarenaya hassleriana HOM05D004345 ORTHO05D005192 3.1e-17 92.4 111 46.8
Cpa.g.sc3060.1 Carica papaya HOM05D004345 ORTHO05D005192 1.9e-11 73.2 86 51.2
Actinidia34666 Actinidia chinensis HOM05D004345 ORTHO05D005192 2.4e-09 66.2 102 46.1
Eucgr.K02289 Eucalyptus grandis HOM05D004345 ORTHO05D005192 5.3e-09 65.1 96 42.7
Sabra12G0028400 Salix brachista HOM05D004345 ORTHO05D005192 4.5e-08 62.0 100 40.0
MELO3C021732.2 Cucumis melo HOM05D004345 ORTHO05D005192 7.7e-08 61.2 99 42.4
CsaV3_1G046170 Cucumis sativus L. HOM05D004345 ORTHO05D005192 7.7e-08 61.2 99 42.4
Potri.012G041300 Populus trichocarpa HOM05D004345 ORTHO05D005192 7.7e-08 61.2 100 40.0
Glyma.02G144000 Glycine max HOM05D004345 ORTHO05D005192 1.0e-07 60.8 77 49.4
Cfa020657 Carpinus fangiana HOM05D004345 ORTHO05D005192 2.9e-07 59.3 89 46.1
Sed0027926 Sechium edule HOM05D004345 ORTHO05D005192 5.0e-07 58.5 95 42.1
Gorai.007G379000 Gossypium raimondii HOM05D004345 ORTHO05D005192 1.4e-06 57.0 120 35.8
Dinv39346 Davidia involucrata HOM05D004345 ORTHO05D005192 5.5e-06 55.1 104 42.3
Gohir.A11G329500 Gossypium hirsutum HOM05D004345 ORTHO05D005192 7.2e-06 54.7 118 35.6


User provided reference genes

Program Settings