Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g25835 Brassica carinata HOM05D004817 ORTHO05D005790 2.2e-38 161.8 80 100.0
Thhalv10022414m.g Eutrema salsugineum HOM05D004817 ORTHO05D005790 2.3e-35 151.8 81 93.8
Carub.0003s1729 Capsella rubella HOM05D004817 ORTHO05D005790 3.9e-35 151.0 78 93.6
A05p32270 Brassica napus HOM05D004817 ORTHO05D005790 6.7e-35 150.2 83 94.0
BraA05t22056Z Brassica rapa HOM05D004817 ORTHO05D005790 6.7e-35 150.2 83 94.0
AL3G30650 Arabidopsis lyrata HOM05D004817 ORTHO05D005790 8.7e-35 149.8 79 93.7
AT3G17580 Arabidopsis thaliana HOM05D004817 ORTHO05D005790 8.7e-35 149.8 80 92.5
BcaB04g18952 Brassica carinata HOM05D004817 ORTHO05D005790 8.7e-35 149.8 81 92.6
BcaC01g03751 Brassica carinata HOM05D004817 ORTHO05D005790 8.7e-35 149.8 81 92.6
C03p48950 Brassica napus HOM05D004817 ORTHO05D005790 8.7e-35 149.8 81 92.6
BolC3t17174H Brassica oleracea HOM05D004817 ORTHO05D005790 8.7e-35 149.8 81 92.6
BraA03t13178Z Brassica rapa HOM05D004817 ORTHO05D005790 8.7e-35 149.8 81 92.6
BcaC05g28773 Brassica carinata HOM05D004817 ORTHO05D005790 1.1e-34 149.4 83 92.8
C05p48800 Brassica napus HOM05D004817 ORTHO05D005790 1.9e-34 148.7 83 92.8
BolC5t33617H Brassica oleracea HOM05D004817 ORTHO05D005790 1.9e-34 148.7 83 92.8
A03p40250 Brassica napus HOM05D004817 ORTHO05D005790 2.5e-34 148.3 81 91.4
Sp3g15710 Schrenkiella parvula HOM05D004817 ORTHO05D005790 2.5e-34 148.3 81 91.4
Aa31LG8G4450 Aethionema arabicum HOM05D004817 ORTHO05D005790 1.3e-33 146.0 84 86.9
BcaB04g20835 Brassica carinata HOM05D004817 ORTHO05D005790 1.3e-33 146.0 82 90.2
BcaC09g48714 Brassica carinata HOM05D004817 ORTHO05D005790 3.7e-33 144.4 81 90.1
A01p36770 Brassica napus HOM05D004817 ORTHO05D005790 3.4e-31 137.9 82 86.6
BraA01t03738Z Brassica rapa HOM05D004817 ORTHO05D005790 3.4e-31 137.9 82 86.6
CARHR092890 Cardamine hirsuta HOM05D004817 ORTHO05D005790 4.5e-31 137.5 78 92.3
Carub.0001s3746 Capsella rubella HOM05D004817 ORTHO05D005790 1.4e-29 132.5 80 85.0
AL1G54940 Arabidopsis lyrata HOM05D004817 ORTHO05D005790 7.2e-29 130.2 78 84.6
Thhalv10011909m.g Eutrema salsugineum HOM05D004817 ORTHO05D005790 1.2e-28 129.4 78 83.3
AT1G48330 Arabidopsis thaliana HOM05D004817 ORTHO05D005790 2.7e-28 128.3 78 83.3
BcaB07g33764 Brassica carinata HOM05D004817 ORTHO05D005790 3.6e-28 127.9 78 82.1
A05p21090 Brassica napus HOM05D004817 ORTHO05D005790 3.6e-28 127.9 78 82.1
BolC5t32277H Brassica oleracea HOM05D004817 ORTHO05D005790 3.6e-28 127.9 78 82.1
BraA05t21012Z Brassica rapa HOM05D004817 ORTHO05D005790 3.6e-28 127.9 78 82.1
CARHR037950 Cardamine hirsuta HOM05D004817 ORTHO05D005790 3.6e-28 127.9 78 83.3
BcaC08g43030 Brassica carinata HOM05D004817 ORTHO05D005790 1.8e-27 125.6 77 80.5
C06p02830 Brassica napus HOM05D004817 ORTHO05D005790 1.8e-27 125.6 77 80.5
C08p05160 Brassica napus HOM05D004817 ORTHO05D005790 1.8e-27 125.6 77 81.8
BolC6t35412H Brassica oleracea HOM05D004817 ORTHO05D005790 1.8e-27 125.6 77 80.5
BraA06t23656Z Brassica rapa HOM05D004817 ORTHO05D005790 1.8e-27 125.6 78 80.8
BcaC07g37143 Brassica carinata HOM05D004817 ORTHO05D005790 3.0e-27 124.8 78 80.8
A08p04790 Brassica napus HOM05D004817 ORTHO05D005790 3.0e-27 124.8 78 80.8
BraA08t32509Z Brassica rapa HOM05D004817 ORTHO05D005790 3.0e-27 124.8 78 80.8
Sp1g35290 Schrenkiella parvula HOM05D004817 ORTHO05D005790 3.9e-27 124.4 78 80.8
BcaB04g17438 Brassica carinata HOM05D004817 ORTHO05D005790 6.7e-27 123.6 78 80.8
BcaC05g27577 Brassica carinata HOM05D004817 ORTHO05D005790 6.7e-27 123.6 78 79.5
C05p35610 Brassica napus HOM05D004817 ORTHO05D005790 6.7e-27 123.6 78 79.5
Aa31LG10G5430 Aethionema arabicum HOM05D004817 ORTHO05D005790 6.9e-24 113.6 80 71.2
THA.LOC104821815 Tarenaya hassleriana HOM05D004817 ORTHO05D005790 3.2e-21 104.8 82 70.7
TPR.G29237 Trifolium pratense HOM05D004817 ORTHO05D005790 2.6e-18 95.1 81 67.9
Glyma.13G117300 Glycine max HOM05D004817 ORTHO05D005790 4.4e-18 94.4 80 63.8
Phvul.003G124400 Phaseolus vulgaris HOM05D004817 ORTHO05D005790 7.4e-18 93.6 80 65.0
Glyma.17G042600 Glycine max HOM05D004817 ORTHO05D005790 9.7e-18 93.2 80 65.0
Manes.03G213500 Manihot esculenta HOM05D004817 ORTHO05D005790 1.3e-17 92.8 81 67.9
arahy.Tifrunner.gnm1.ann1.E7NGHZ Arachis hypogaea HOM05D004817 ORTHO05D005790 1.7e-17 92.4 81 63.0
Phvul.009G221600 Phaseolus vulgaris HOM05D004817 ORTHO05D005790 3.7e-17 91.3 81 64.2
Psat1g016600 Pisum sativum HOM05D004817 ORTHO05D005790 3.7e-17 91.3 81 67.9
Solyc05g053180.3 Solanum lycopersicum HOM05D004817 ORTHO05D005790 1.1e-16 89.7 72 62.5
Sopen05g031690 Solanum pennellii HOM05D004817 ORTHO05D005790 1.1e-16 89.7 72 62.5
CAN.G305.33 Capsicum annuum HOM05D004817 ORTHO05D005790 1.4e-16 89.4 72 62.5
PGSC0003DMG400027147 Solanum tuberosum HOM05D004817 ORTHO05D005790 1.4e-16 89.4 72 62.5
Glyma.15G185200 Glycine max HOM05D004817 ORTHO05D005790 2.4e-16 88.6 81 63.0
arahy.Tifrunner.gnm1.ann1.XTK2NM Arachis hypogaea HOM05D004817 ORTHO05D005790 4.1e-16 87.8 81 60.5
Glyma.09G077700 Glycine max HOM05D004817 ORTHO05D005790 5.3e-16 87.4 82 63.4
Sed0023994 Sechium edule HOM05D004817 ORTHO05D005790 7.0e-16 87.0 73 61.6
Atru.chr4.3187 Acer truncatum HOM05D004817 ORTHO05D005790 9.1e-16 86.7 81 58.0
Gohir.D01G023700 Gossypium hirsutum HOM05D004817 ORTHO05D005790 1.2e-15 86.3 73 64.4
Gorai.002G032200 Gossypium raimondii HOM05D004817 ORTHO05D005790 1.2e-15 86.3 73 64.4
Gohir.A01G036400 Gossypium hirsutum HOM05D004817 ORTHO05D005790 1.6e-15 85.9 72 65.3
ClCG05G006950 Citrullus lanatus HOM05D004817 ORTHO05D005790 2.0e-15 85.5 80 56.2
Lalb_Chr08g0232961 Lupinus albus HOM05D004817 ORTHO05D005790 2.0e-15 85.5 80 63.8
Lalb_Chr23g0276121 Lupinus albus HOM05D004817 ORTHO05D005790 2.0e-15 85.5 80 63.8
Nitab4.5_0001769g0110 Nicotiana tabacum HOM05D004817 ORTHO05D005790 2.0e-15 85.5 72 63.9
Eucgr.H04140 Eucalyptus grandis HOM05D004817 ORTHO05D005790 2.6e-15 85.1 73 61.6
Lalb_Chr12g0200501 Lupinus albus HOM05D004817 ORTHO05D005790 3.5e-15 84.7 81 58.0
CANSAT25G3847 Cannabis sativa HOM05D004817 ORTHO05D005790 4.5e-15 84.3 89 58.4
COL.COLO4_25048 Corchorus olitorius HOM05D004817 ORTHO05D005790 4.5e-15 84.3 70 65.7
Medtr2g044940 Medicago truncatula HOM05D004817 ORTHO05D005790 4.5e-15 84.3 81 63.0
PGR031G2777 Punica granatum HOM05D004817 ORTHO05D005790 4.5e-15 84.3 80 60.0
Ca_02320_v3 Cicer arietinum L. HOM05D004817 ORTHO05D005790 7.7e-15 83.6 81 60.5
Eucgr.B02200 Eucalyptus grandis HOM05D004817 ORTHO05D005790 7.7e-15 83.6 79 58.2
Potri.010G004000 Populus trichocarpa HOM05D004817 ORTHO05D005790 7.7e-15 83.6 81 59.3
Medtr4g124250 Medicago truncatula HOM05D004817 ORTHO05D005790 1.0e-14 83.2 82 56.1
Lalb_Chr13g0299061 Lupinus albus HOM05D004817 ORTHO05D005790 1.3e-14 82.8 72 61.1
Sabra10G0003400 Salix brachista HOM05D004817 ORTHO05D005790 1.3e-14 82.8 81 58.0
Duzib151G1168 Durio zibethinus HOM05D004817 ORTHO05D005790 2.2e-14 82.0 72 62.5
PGR004G2302 Punica granatum HOM05D004817 ORTHO05D005790 2.2e-14 82.0 73 58.9
Sed0022538 Sechium edule HOM05D004817 ORTHO05D005790 2.2e-14 82.0 78 55.1
TPR.G12580 Trifolium pratense HOM05D004817 ORTHO05D005790 2.2e-14 82.0 82 56.1
QL06p014718 Quercus lobata HOM05D004817 ORTHO05D005790 2.9e-14 81.6 80 56.2
Lalb_Chr07g0181551 Lupinus albus HOM05D004817 ORTHO05D005790 3.8e-14 81.3 81 58.0
Lj4g0003186 Lotus japonicus HOM05D004817 ORTHO05D005790 5.0e-14 80.9 79 54.4
MD16G1133100 Malus domestica HOM05D004817 ORTHO05D005790 5.0e-14 80.9 73 57.5
Cfa015752 Carpinus fangiana HOM05D004817 ORTHO05D005790 6.5e-14 80.5 79 54.4
CiPaw.01G127200 Carya illinoinensis HOM05D004817 ORTHO05D005790 6.5e-14 80.5 79 58.2
Lj2g0017510 Lotus japonicus HOM05D004817 ORTHO05D005790 6.5e-14 80.5 79 54.4
FAN12G2725 Fragaria x ananassa HOM05D004817 ORTHO05D005790 8.5e-14 80.1 79 58.2
Nitab4.5_0000745g0110 Nicotiana tabacum HOM05D004817 ORTHO05D005790 8.5e-14 80.1 72 59.7
Psat4g020640 Pisum sativum HOM05D004817 ORTHO05D005790 8.5e-14 80.1 76 56.6
Cc03_g00010 Coffea canephora HOM05D004817 ORTHO05D005790 1.5e-13 79.3 78 59.0
FvH4_4g21760 Fragaria vesca HOM05D004817 ORTHO05D005790 1.5e-13 79.3 79 58.2
FAN07G2633 Fragaria x ananassa HOM05D004817 ORTHO05D005790 1.5e-13 79.3 79 58.2
FAN17G1578 Fragaria x ananassa HOM05D004817 ORTHO05D005790 1.5e-13 79.3 79 58.2
arahy.Tifrunner.gnm1.ann1.WNQ9XL Arachis hypogaea HOM05D004817 ORTHO05D005790 2.5e-13 78.6 85 55.3
EL10Ac3g06222 Beta vulgaris HOM05D004817 ORTHO05D005790 2.5e-13 78.6 78 55.1
Ciclev10007149m.g Citrus clementina HOM05D004817 ORTHO05D005790 2.5e-13 78.6 80 53.8
CsaV3_3G015620 Cucumis sativus L. HOM05D004817 ORTHO05D005790 2.5e-13 78.6 76 59.2
RcHm_v2.0_Chr4g0427991 Rosa chinensis HOM05D004817 ORTHO05D005790 2.5e-13 78.6 79 57.0
Dinv24730 Davidia involucrata HOM05D004817 ORTHO05D005790 3.2e-13 78.2 81 56.8
MD13G1137200 Malus domestica HOM05D004817 ORTHO05D005790 3.2e-13 78.2 73 57.5
Migut.J01631 Erythranthe guttata HOM05D004817 ORTHO05D005790 4.2e-13 77.8 74 54.1
PSO761G0543 Papaver somniferum HOM05D004817 ORTHO05D005790 4.2e-13 77.8 70 57.1
SalBow6G6449 Salvia bowleyana HOM05D004817 ORTHO05D005790 4.2e-13 77.8 70 55.7
Cpa.g.sc146.7 Carica papaya HOM05D004817 ORTHO05D005790 5.5e-13 77.4 89 48.3
Lj6g0012255 Lotus japonicus HOM05D004817 ORTHO05D005790 9.4e-13 76.6 81 56.8
CANSAT78G0586 Cannabis sativa HOM05D004817 ORTHO05D005790 1.6e-12 75.9 82 51.2
arahy.Tifrunner.gnm1.ann1.V5CRDX Arachis hypogaea HOM05D004817 ORTHO05D005790 2.7e-12 75.1 87 52.9
Aqoxy5G02845 Aquilegia oxysepala HOM05D004817 ORTHO05D005790 3.6e-12 74.7 73 53.4
Nn4g25286 Nelumbo nucifera HOM05D004817 ORTHO05D005790 4.7e-12 74.3 70 55.7
Prupe.1G208000 Prunus persica HOM05D004817 ORTHO05D005790 4.7e-12 74.3 81 53.1
Hund12264 Selenicereus undatus HOM05D004817 ORTHO05D005790 8.0e-12 73.6 78 53.8
Oeu022716.1 Olea europaea HOM05D004817 ORTHO05D005790 1.8e-11 72.4 74 51.4
Thecc.04G314800 Theobroma cacao HOM05D004817 ORTHO05D005790 1.8e-11 72.4 73 57.5
DCAR_023420 Daucus carota HOM05D004817 ORTHO05D005790 3.0e-11 71.6 70 54.3
Lalb_Chr11g0073761 Lupinus albus HOM05D004817 ORTHO05D005790 3.0e-11 71.6 78 55.1
TAR362G1300 Trochodendron aralioides HOM05D004817 ORTHO05D005790 5.2e-11 70.9 71 56.3
GSVIVG01017708001 Vitis vinifera HOM05D004817 ORTHO05D005790 5.2e-11 70.9 79 54.4
Oeu002212.1 Olea europaea HOM05D004817 ORTHO05D005790 8.8e-11 70.1 75 50.7
DCAR_026926 Daucus carota HOM05D004817 ORTHO05D005790 1.1e-10 69.7 70 52.9
Eucgr.H01515 Eucalyptus grandis HOM05D004817 ORTHO05D005790 2.6e-10 68.6 82 48.8
Solyc12g098880.2 Solanum lycopersicum HOM05D004817 ORTHO05D005790 2.6e-10 68.6 70 54.3
Sopen12g033630 Solanum pennellii HOM05D004817 ORTHO05D005790 4.4e-10 67.8 71 53.5
CDE02G4689 Ceratophyllum demersum HOM05D004817 ORTHO05D005790 9.7e-10 66.6 72 45.8
PGSC0003DMG400004597 Solanum tuberosum HOM05D004817 ORTHO05D005790 9.7e-10 66.6 69 53.6
Aqoxy2G02458 Aquilegia oxysepala HOM05D004817 ORTHO05D005790 1.7e-09 65.9 72 50.0
DCAR_030417 Daucus carota HOM05D004817 ORTHO05D005790 1.7e-09 65.9 82 42.7
CDE08G0719 Ceratophyllum demersum HOM05D004817 ORTHO05D005790 2.8e-09 65.1 73 47.9
MBI18_g40079_MAGBIO Magnolia biondii HOM05D004817 ORTHO05D005790 3.7e-09 64.7 70 50.0
MBI18_g46513_MAGBIO Magnolia biondii HOM05D004817 ORTHO05D005790 4.8e-09 64.3 70 50.0
unitig_746.g26894 Utricularia gibba HOM05D004817 ORTHO05D005790 1.1e-08 63.2 72 48.6
DCAR_002559 Daucus carota HOM05D004817 ORTHO05D005790 1.4e-08 62.8 77 40.3
Peaxi162Scf00323g00924 Petunia axillaris HOM05D004817 ORTHO05D005790 1.8e-08 62.4 69 55.1
Nitab4.5_0003998g0090 Nicotiana tabacum HOM05D004817 ORTHO05D005790 2.4e-08 62.0 75 50.7
Nitab4.5_0000978g0020 Nicotiana tabacum HOM05D004817 ORTHO05D005790 4.1e-08 61.2 75 50.7
Haze_00750 Corylus avellana HOM05D004817 ORTHO05D005790 5.3e-08 60.8 60 55.0
unitig_744.g24175 Utricularia gibba HOM05D004817 ORTHO05D005790 2.0e-07 58.9 72 47.2
Zm00001eb129600 Zea mays HOM05D004817 ORTHO05D005790 2.0e-07 58.9 85 41.2
Zm00001eb332330 Zea mays HOM05D004817 ORTHO05D005790 2.0e-07 58.9 83 43.4
unitig_21.g20684 Utricularia gibba HOM05D004817 ORTHO05D005790 4.5e-07 57.8 72 44.4
ATR0796G174 Amborella trichopoda HOM05D004817 ORTHO05D005790 8.5e-06 53.5 76 43.4


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