Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g25813 Brassica carinata HOM05D008745 ORTHO05D010941 1.8e-99 365.9 188 100.0
A05p32570 Brassica napus HOM05D008745 ORTHO05D010941 1.7e-84 316.2 188 87.2
BolC5t33663H Brassica oleracea HOM05D008745 ORTHO05D010941 1.7e-84 316.2 188 86.7
BcaC05g28818 Brassica carinata HOM05D008745 ORTHO05D010941 2.2e-84 315.8 188 86.7
C05p49220 Brassica napus HOM05D008745 ORTHO05D010941 2.2e-84 315.8 188 86.7
BraA05t22081Z Brassica rapa HOM05D008745 ORTHO05D010941 4.8e-84 314.7 188 86.7
Sp3g15410 Schrenkiella parvula HOM05D008745 ORTHO05D010941 8.0e-71 270.8 188 74.5
CARHR092500 Cardamine hirsuta HOM05D008745 ORTHO05D010941 5.9e-66 254.6 188 70.7
Thhalv10022084m.g Eutrema salsugineum HOM05D008745 ORTHO05D010941 1.7e-60 236.5 171 70.2
AL3G30260 Arabidopsis lyrata HOM05D008745 ORTHO05D010941 3.1e-59 232.3 188 64.9
AT3G17227 Arabidopsis thaliana HOM05D008745 ORTHO05D010941 9.2e-59 230.7 188 63.3
Thhalv10021601m.g Eutrema salsugineum HOM05D008745 ORTHO05D010941 2.0e-58 229.6 188 61.2
AT3G17230 Arabidopsis thaliana HOM05D008745 ORTHO05D010941 2.5e-56 222.6 187 63.1
Sp3g15450 Schrenkiella parvula HOM05D008745 ORTHO05D010941 5.6e-56 221.5 188 59.0
AT3G17225 Arabidopsis thaliana HOM05D008745 ORTHO05D010941 9.5e-56 220.7 188 64.9
BcaB04g18935 Brassica carinata HOM05D008745 ORTHO05D010941 1.3e-49 200.3 190 61.1
Sp3g15440 Schrenkiella parvula HOM05D008745 ORTHO05D010941 6.6e-49 198.0 189 56.6
Carub.0002s1162 Capsella rubella HOM05D008745 ORTHO05D010941 1.2e-47 193.7 185 55.1
A03p40110 Brassica napus HOM05D008745 ORTHO05D010941 3.6e-47 192.2 189 59.3
BcaC01g03777 Brassica carinata HOM05D008745 ORTHO05D010941 1.8e-46 189.9 189 58.2
Carub.0006s2544 Capsella rubella HOM05D008745 ORTHO05D010941 4.0e-46 188.7 189 55.0
Carub.0002s0897 Capsella rubella HOM05D008745 ORTHO05D010941 8.9e-46 187.6 186 54.3
C03p48680 Brassica napus HOM05D008745 ORTHO05D010941 3.4e-45 185.7 189 57.7
BraA03t13161Z Brassica rapa HOM05D008745 ORTHO05D010941 5.8e-45 184.9 189 57.1
BolC3t17147H Brassica oleracea HOM05D008745 ORTHO05D010941 7.5e-45 184.5 191 57.1
AL3G30270 Arabidopsis lyrata HOM05D008745 ORTHO05D010941 1.9e-43 179.9 185 54.1
BraA05t22077Z Brassica rapa HOM05D008745 ORTHO05D010941 4.1e-43 178.7 187 50.3
Carub.0006s2723 Capsella rubella HOM05D008745 ORTHO05D010941 4.1e-43 178.7 187 49.2
Carub.0003s2924 Capsella rubella HOM05D008745 ORTHO05D010941 5.4e-43 178.3 186 48.9
A05p32510 Brassica napus HOM05D008745 ORTHO05D010941 9.2e-43 177.6 187 49.7
C05p49180 Brassica napus HOM05D008745 ORTHO05D010941 9.2e-43 177.6 187 50.8
BcaB06g25814 Brassica carinata HOM05D008745 ORTHO05D010941 1.6e-42 176.8 185 51.4
BcaC05g28814 Brassica carinata HOM05D008745 ORTHO05D010941 7.5e-37 157.9 178 47.8
BolC5t33659H Brassica oleracea HOM05D008745 ORTHO05D010941 2.9e-36 156.0 178 47.8
Sp3g04630 Schrenkiella parvula HOM05D008745 ORTHO05D010941 5.2e-30 135.2 189 41.8
BolC1t05672H Brassica oleracea HOM05D008745 ORTHO05D010941 2.1e-26 123.2 190 38.4
Thhalv10022010m.g Eutrema salsugineum HOM05D008745 ORTHO05D010941 8.6e-25 117.9 187 39.0
AL3G16450 Arabidopsis lyrata HOM05D008745 ORTHO05D010941 1.1e-24 117.5 189 40.7
BraA01t04492Z Brassica rapa HOM05D008745 ORTHO05D010941 6.2e-23 111.7 183 37.2
BcaC09g47846 Brassica carinata HOM05D008745 ORTHO05D010941 1.4e-22 110.5 183 38.3
AT2G15345 Arabidopsis thaliana HOM05D008745 ORTHO05D010941 9.0e-22 107.8 119 50.4
AT3G05741 Arabidopsis thaliana HOM05D008745 ORTHO05D010941 5.1e-17 92.0 190 33.2
AL3G47110 Arabidopsis lyrata HOM05D008745 ORTHO05D010941 2.8e-15 86.3 98 52.0
QL06p013378 Quercus lobata HOM05D003146 ORTHO05D001819 3.5e-10 69.3 176 26.1
QL04p007223 Quercus lobata HOM05D003146 ORTHO05D001819 1.5e-08 63.9 168 28.6
CARHR092490 Cardamine hirsuta HOM05D003146 ORTHO05D001819 7.4e-08 61.6 133 29.3
AT3G17220 Arabidopsis thaliana HOM05D003146 ORTHO05D001819 1.3e-07 60.8 133 28.6
AL3G30250 Arabidopsis lyrata HOM05D003146 ORTHO05D001819 1.6e-07 60.5 133 28.6
Oeu000482.1 Olea europaea HOM05D009438 ORTHO05D010870 1.6e-07 60.5 184 28.3
Nitab4.5_0005440g0020 Nicotiana tabacum HOM05D003146 ORTHO05D001819 2.1e-07 60.1 189 30.2
Thhalv10022367m.g Eutrema salsugineum HOM05D003146 ORTHO05D001819 1.1e-06 57.8 133 28.6
THA.LOC104816708 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 3.1e-06 56.2 185 24.9
MELO3C019860.2 Cucumis melo HOM05D003146 ORTHO05D001819 5.3e-06 55.5 173 26.0
THA.LOC104817105 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 5.3e-06 55.5 185 24.9
A01p37050 Brassica napus HOM05D003146 ORTHO05D001819 6.9e-06 55.1 176 27.3
BraA01t03766Z Brassica rapa HOM05D003146 ORTHO05D001819 6.9e-06 55.1 176 27.3
THA.LOC104825373 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 6.9e-06 55.1 185 24.3
BcaC09g48683 Brassica carinata HOM05D003146 ORTHO05D001819 9.0e-06 54.7 179 26.8
C01p46950 Brassica napus HOM05D003146 ORTHO05D001819 9.0e-06 54.7 179 26.8
C01p46980 Brassica napus HOM05D003146 ORTHO05D001819 9.0e-06 54.7 179 26.8
BolC1t04666H Brassica oleracea HOM05D003146 ORTHO05D001819 9.0e-06 54.7 179 26.8


User provided reference genes

Program Settings