Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g25738 Brassica carinata HOM05D007818 ORTHO05D091088 2.2e-55 218.8 113 100.0
BcaB06g26472 Brassica carinata HOM05D007818 ORTHO05D092505 1.6e-53 212.6 112 97.3
BcaB05g24680 Brassica carinata HOM05D007818 ORTHO05D095925 5.2e-49 197.6 109 94.5
BcaB04g17702 Brassica carinata HOM05D007818 ORTHO05D096147 3.8e-44 181.4 108 89.8
BcaB06g27139 Brassica carinata HOM05D007818 ORTHO05D092592 3.8e-44 181.4 93 100.0
BcaB08g36129 Brassica carinata HOM05D007818 ORTHO05D092162 1.6e-21 106.3 75 80.0
BcaB07g33943 Brassica carinata HOM05D007818 ORTHO05D091954 4.7e-18 94.7 116 54.3
BcaB05g23796 Brassica carinata HOM05D007818 ORTHO05D092076 8.9e-17 90.5 116 50.0
C04p35200 Brassica napus HOM05D007818 ORTHO05D015522 7.8e-13 77.4 70 62.9
C05p18330 Brassica napus HOM05D007818 ORTHO05D014962 7.8e-13 77.4 70 62.9
C04p05460 Brassica napus HOM05D007818 ORTHO05D014962 2.3e-12 75.9 70 61.4
C07p11950 Brassica napus HOM05D007818 ORTHO05D015522 2.3e-12 75.9 70 61.4
BolC8t47206H Brassica oleracea HOM05D007818 ORTHO05D014962 2.3e-12 75.9 77 58.4
BraA01t02469Z Brassica rapa HOM05D007818 ORTHO05D015522 3.0e-12 75.5 74 62.2
BraA06t25340Z Brassica rapa HOM05D007818 ORTHO05D015522 3.9e-12 75.1 70 61.4
A01p25450 Brassica napus HOM05D007818 ORTHO05D015522 5.0e-12 74.7 74 60.8
C04p47800 Brassica napus HOM05D007818 ORTHO05D014962 5.0e-12 74.7 65 63.1
BolC4t26382H Brassica oleracea HOM05D007818 ORTHO05D014962 5.0e-12 74.7 65 63.1
BcaC05g26853 Brassica carinata HOM05D007818 ORTHO05D011878 6.6e-12 74.3 77 57.1
C05p37820 Brassica napus HOM05D007818 ORTHO05D014962 6.6e-12 74.3 70 61.4
C01p41510 Brassica napus HOM05D007818 ORTHO05D015522 1.1e-11 73.6 71 60.6
BraA01t01576Z Brassica rapa HOM05D007818 ORTHO05D015522 3.3e-11 72.0 92 55.4
BolC7t41108H Brassica oleracea HOM05D007818 ORTHO05D014962 2.1e-10 69.3 65 60.0
BraA03t15277Z Brassica rapa HOM05D007818 ORTHO05D014962 3.6e-10 68.6 102 48.0
BolC8t49596H Brassica oleracea HOM05D007818 ORTHO05D014962 6.2e-10 67.8 73 57.5
C05p45450 Brassica napus HOM05D007818 ORTHO05D014962 3.1e-09 65.5 68 57.4
BcaC05g28457 Brassica carinata HOM05D007818 ORTHO05D014962 6.8e-09 64.3 77 51.9
C06p26590 Brassica napus HOM05D007818 ORTHO05D015522 1.5e-08 63.2 53 60.4
A07p05920 Brassica napus HOM05D007818 ORTHO05D015522 9.9e-08 60.5 66 54.5
BolC7t41573H Brassica oleracea HOM05D007818 ORTHO05D015522 2.9e-07 58.9 53 58.5
BolC6t35450H Brassica oleracea HOM05D007818 ORTHO05D015522 1.4e-06 56.6 48 60.4


User provided reference genes

Program Settings