Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g25636 Brassica carinata HOM05D004604 ORTHO05D005744 0.0e+00 1112.1 583 100.0
BcaC05g29392 Brassica carinata HOM05D004604 ORTHO05D005744 3.7e-292 1007.7 584 91.1
C05p56850 Brassica napus HOM05D004604 ORTHO05D005744 3.7e-292 1007.7 584 91.1
BolC5t34349H Brassica oleracea HOM05D004604 ORTHO05D005744 1.1e-291 1006.1 584 90.9
A05p38060 Brassica napus HOM05D004604 ORTHO05D005744 1.4e-286 989.2 586 90.4
BraA05t22598Z Brassica rapa HOM05D004604 ORTHO05D005744 1.4e-286 989.2 586 90.4
Sp3g09520 Schrenkiella parvula HOM05D004604 ORTHO05D005744 4.9e-260 901.0 599 80.0
AL3G22760 Arabidopsis lyrata HOM05D004604 ORTHO05D005744 5.8e-245 850.9 599 77.6
Carub.0003s1055 Capsella rubella HOM05D004604 ORTHO05D005744 9.3e-243 843.6 603 74.8
CARHR085800 Cardamine hirsuta HOM05D004604 ORTHO05D005744 1.3e-228 796.6 599 72.1
Sp6g37190 Schrenkiella parvula HOM05D004604 ORTHO05D005744 2.3e-201 706.1 634 61.4
Aa31LG11G6730 Aethionema arabicum HOM05D004604 ORTHO05D005744 1.5e-200 703.4 612 60.3
AT5G05700 Arabidopsis thaliana HOM05D004604 ORTHO05D005744 2.5e-200 702.6 637 60.9
Aa31LG3G4550 Aethionema arabicum HOM05D004604 ORTHO05D005744 1.3e-199 700.3 646 60.8
THA.LOC104816553 Tarenaya hassleriana HOM05D004604 ORTHO05D005744 1.1e-198 697.2 630 60.8
AL6G15600 Arabidopsis lyrata HOM05D004604 ORTHO05D005744 1.0e-196 690.6 623 61.5
A10p30660 Brassica napus HOM05D004604 ORTHO05D005744 3.6e-194 682.2 604 62.4
C09p71140 Brassica napus HOM05D004604 ORTHO05D005744 5.1e-193 678.3 606 61.7
BolC9t59876H Brassica oleracea HOM05D004604 ORTHO05D005744 8.2e-191 671.0 604 61.4
BraA10t45107Z Brassica rapa HOM05D004604 ORTHO05D005744 9.1e-190 667.5 642 58.7
CARHR207580 Cardamine hirsuta HOM05D004604 ORTHO05D005744 5.9e-189 664.8 590 63.6
BcaC06g32278 Brassica carinata HOM05D004604 ORTHO05D005744 5.2e-185 651.7 605 60.0
Manes.10G013900 Manihot esculenta HOM05D004604 ORTHO05D005744 1.7e-175 620.2 628 53.7
AT3G11240 Arabidopsis thaliana HOM05D004604 ORTHO05D005744 3.7e-175 619.0 452 77.0
Gorai.011G285800 Gossypium raimondii HOM05D004604 ORTHO05D005744 3.5e-173 612.5 635 53.2
Carub.0006s0459 Capsella rubella HOM05D004604 ORTHO05D005744 2.9e-172 609.4 574 59.6
Gohir.A10G235000 Gossypium hirsutum HOM05D004604 ORTHO05D005744 2.9e-172 609.4 635 53.1
arahy.Tifrunner.gnm1.ann1.E2DHW8 Arachis hypogaea HOM05D004604 ORTHO05D005744 6.8e-169 598.2 622 51.0
RcHm_v2.0_Chr1g0369991 Rosa chinensis HOM05D004604 ORTHO05D005744 2.0e-168 596.7 613 53.3
CiPaw.02G191600 Carya illinoinensis HOM05D004604 ORTHO05D005744 3.7e-167 592.4 625 53.3
Potri.010G190100 Populus trichocarpa HOM05D004604 ORTHO05D005744 6.3e-167 591.7 621 52.2
Sabra10G0146600 Salix brachista HOM05D004604 ORTHO05D005744 6.3e-167 591.7 622 52.6
Cfa001330 Carpinus fangiana HOM05D004604 ORTHO05D005744 5.4e-166 588.6 633 54.2
CANSAT35G0855 Cannabis sativa HOM05D004604 ORTHO05D005744 1.2e-165 587.4 626 52.2
CSS0014761 Camellia sinensis var. sinensis HOM05D004604 ORTHO05D005744 2.0e-165 586.6 632 50.9
Cpa.g.sc19.189 Carica papaya HOM05D004604 ORTHO05D005744 2.7e-165 586.3 635 51.8
FAN10G0865 Fragaria x ananassa HOM05D004604 ORTHO05D005744 2.7e-165 586.3 623 51.7
MD07G1220300 Malus domestica HOM05D004604 ORTHO05D005744 2.7e-165 586.3 632 52.4
MD01G1132500 Malus domestica HOM05D004604 ORTHO05D005744 5.9e-165 585.1 630 52.2
Ciclev10030943m.g Citrus clementina HOM05D004604 ORTHO05D005744 7.7e-165 584.7 628 52.4
Hund13846 Selenicereus undatus HOM05D004604 ORTHO05D005744 1.3e-164 583.9 634 52.2
TWI09G1217 Tripterygium wilfordii HOM05D004604 ORTHO05D005744 1.5e-163 580.5 634 50.9
Lalb_Chr18g0052631 Lupinus albus HOM05D004604 ORTHO05D005744 2.5e-163 579.7 634 51.3
Glyma.18G028600 Glycine max HOM05D004604 ORTHO05D005744 5.6e-163 578.6 619 50.7
Medtr3g070310 Medicago truncatula HOM05D004604 ORTHO05D005744 5.6e-163 578.6 628 50.2
Thecc.10G020600 Theobroma cacao HOM05D004604 ORTHO05D005744 1.6e-162 577.0 635 51.2
Phvul.001G241900 Phaseolus vulgaris HOM05D004604 ORTHO05D005744 2.1e-162 576.6 633 49.9
Prupe.2G248700 Prunus persica HOM05D004604 ORTHO05D005744 2.1e-162 576.6 631 51.8
Lalb_Chr15g0084181 Lupinus albus HOM05D004604 ORTHO05D005744 3.6e-162 575.9 632 50.8
PGR044G2346 Punica granatum HOM05D004604 ORTHO05D005744 4.7e-162 575.5 628 51.6
Lj1C953T18 Lonicera japonica HOM05D004604 ORTHO05D005744 6.1e-162 575.1 615 52.0
FvH4_7g24330 Fragaria vesca HOM05D004604 ORTHO05D005744 2.0e-160 570.1 619 51.9
Hma1.2p1_0446F.1_g154570 Hydrangea macrophylla HOM05D004604 ORTHO05D005744 4.4e-160 568.9 627 53.0
Nn2g11459 Nelumbo nucifera HOM05D004604 ORTHO05D005744 5.7e-160 568.5 640 50.0
Psat5g126400 Pisum sativum HOM05D004604 ORTHO05D005744 9.8e-160 567.8 635 49.3
Rhsim03G0142100 Rhododendron simsii HOM05D004604 ORTHO05D005744 9.8e-160 567.8 630 50.3
Ca_15268_v3 Cicer arietinum L. HOM05D004604 ORTHO05D005744 2.9e-159 566.2 632 50.0
Migut.F01373 Erythranthe guttata HOM05D004604 ORTHO05D005744 3.7e-159 565.8 597 52.4
HanXRQChr14g0459851 Helianthus annuus HOM05D004604 ORTHO05D005744 8.3e-159 564.7 613 50.9
Cc02_g06650 Coffea canephora HOM05D004604 ORTHO05D005744 1.1e-158 564.3 633 50.2
Migut.F01374 Erythranthe guttata HOM05D004604 ORTHO05D005744 1.1e-158 564.3 577 52.5
Glyma.11G228500 Glycine max HOM05D004604 ORTHO05D005744 1.1e-158 564.3 620 50.8
EL10Ac2g04814 Beta vulgaris HOM05D004604 ORTHO05D005744 1.8e-158 563.5 631 51.0
ECA238G1235 Erigeron canadensis HOM05D004604 ORTHO05D005744 3.2e-158 562.8 605 51.1
Duzib114G0112 Durio zibethinus HOM05D004604 ORTHO05D005744 4.1e-158 562.4 630 50.8
TPR.G2507 Trifolium pratense HOM05D004604 ORTHO05D005744 4.1e-158 562.4 626 49.0
Lj6g0016498 Lotus japonicus HOM05D004604 ORTHO05D005744 5.4e-158 562.0 632 48.1
TWI73G0703 Tripterygium wilfordii HOM05D004604 ORTHO05D005744 5.4e-158 562.0 669 48.6
VMungo1383G0266 Vigna mungo HOM05D004604 ORTHO05D005744 9.2e-158 561.2 632 50.2
CSS0028164 Camellia sinensis var. sinensis HOM05D004604 ORTHO05D005744 1.6e-157 560.5 638 50.6
FAN01G3126 Fragaria x ananassa HOM05D004604 ORTHO05D005744 2.7e-157 559.7 587 52.5
ClCG11G006230 Citrullus lanatus HOM05D004604 ORTHO05D005744 2.3e-156 556.6 637 49.3
Peaxi162Scf00825g00019 Petunia axillaris HOM05D004604 ORTHO05D005744 6.6e-156 555.1 623 51.0
TAR623G0226 Trochodendron aralioides HOM05D004604 ORTHO05D005744 8.6e-156 554.7 647 49.9
Atru.chr12.19 Acer truncatum HOM05D004604 ORTHO05D005744 3.3e-155 552.7 638 50.0
HanXRQChr14g0459841 Helianthus annuus HOM05D004604 ORTHO05D005744 9.5e-155 551.2 591 50.9
PSO384G4393 Papaver somniferum HOM05D004604 ORTHO05D005744 9.5e-155 551.2 633 48.2
FAN06G3796 Fragaria x ananassa HOM05D004604 ORTHO05D005744 2.8e-154 549.7 587 52.1
Eucgr.J00228 Eucalyptus grandis HOM05D004604 ORTHO05D005744 8.0e-154 548.1 604 51.8
Sopen06g017720 Solanum pennellii HOM05D004604 ORTHO05D005744 3.1e-153 546.2 630 50.2
SGA_v2.0_scaffold76G25082 Striga asiatica HOM05D004604 ORTHO05D005744 3.1e-153 546.2 607 52.6
Aqoxy4G02603 Aquilegia oxysepala HOM05D004604 ORTHO05D005744 6.8e-153 545.0 617 49.3
Dinv34395 Davidia involucrata HOM05D004604 ORTHO05D005744 6.8e-153 545.0 515 55.7
Eucgr.J00226 Eucalyptus grandis HOM05D004604 ORTHO05D005744 6.8e-153 545.0 647 49.9
Lsat_1_v5_gn_2_122780 Lactuca sativa HOM05D004604 ORTHO05D005744 2.0e-152 543.5 625 48.5
CsaV3_6G001760 Cucumis sativus L. HOM05D004604 ORTHO05D005744 5.8e-152 542.0 640 47.5
Ah.16g103410 Amaranthus hybridus HOM05D004604 ORTHO05D005744 7.5e-152 541.6 634 48.3
PSO339G2357 Papaver somniferum HOM05D004604 ORTHO05D005744 7.5e-152 541.6 645 47.1
CAN.G17.11 Capsicum annuum HOM05D004604 ORTHO05D005744 8.3e-151 538.1 619 51.1
Nitab4.5_0005174g0010 Nicotiana tabacum HOM05D004604 ORTHO05D005744 1.1e-150 537.7 619 48.9
Nitab4.5_0000802g0040 Nicotiana tabacum HOM05D004604 ORTHO05D005744 1.9e-150 537.0 619 49.4
PGSC0003DMG400023817 Solanum tuberosum HOM05D004604 ORTHO05D005744 1.9e-150 537.0 627 49.3
Solyc06g051760.3 Solanum lycopersicum HOM05D004604 ORTHO05D005744 4.1e-150 535.8 636 48.6
Sabra08G0049200 Salix brachista HOM05D004604 ORTHO05D005744 7.8e-149 531.6 495 57.0
Potri.008G067000 Populus trichocarpa HOM05D004604 ORTHO05D005744 1.2e-146 524.2 489 56.2
Cpa.g.sc19.187 Carica papaya HOM05D004604 ORTHO05D005744 2.8e-146 523.1 498 56.6
Dinv17981 Davidia involucrata HOM05D004604 ORTHO05D005744 6.2e-146 521.9 496 56.5
ATR0618G256 Amborella trichopoda HOM05D004604 ORTHO05D005744 1.8e-145 520.4 647 46.8
Eucgr.J00230 Eucalyptus grandis HOM05D004604 ORTHO05D005744 1.8e-145 520.4 609 48.6
TAR369G0014 Trochodendron aralioides HOM05D004604 ORTHO05D005744 1.2e-144 517.7 519 54.1
MELO3C008290.2 Cucumis melo HOM05D004604 ORTHO05D005744 2.0e-144 516.9 637 46.6
Hund15948 Selenicereus undatus HOM05D004604 ORTHO05D005744 5.8e-144 515.4 626 47.1
MSTRG.213 Avicennia marina HOM05D004604 ORTHO05D005744 9.8e-144 514.6 510 54.1
Os05g0446800 Oryza sativa ssp. japonica HOM05D004604 ORTHO05D005744 1.9e-142 510.4 635 46.1
MBI05_g34496_MAGBIO Magnolia biondii HOM05D004604 ORTHO05D005744 2.7e-141 506.5 524 54.4
arahy.Tifrunner.gnm1.ann1.C37ZT5 Arachis hypogaea HOM05D004604 ORTHO05D005744 7.8e-141 505.0 566 48.8
Sed0013753 Sechium edule HOM05D004604 ORTHO05D005744 8.6e-140 501.5 480 54.6
AUR62022867 Chenopodium quinoa HOM05D004604 ORTHO05D005744 1.1e-139 501.1 506 53.0
unitig_62.g23928 Utricularia gibba HOM05D004604 ORTHO05D005744 5.6e-139 498.8 645 45.6
FAN03G0827 Fragaria x ananassa HOM05D004604 ORTHO05D005744 7.3e-139 498.4 685 45.4
DCAR_028567 Daucus carota HOM05D004604 ORTHO05D005744 3.6e-138 496.1 589 49.9
Cpa.g.sc19.188 Carica papaya HOM05D004604 ORTHO05D005744 1.5e-136 490.7 486 53.9
Oeu048694.1 Olea europaea HOM05D004604 ORTHO05D005744 1.5e-136 490.7 496 54.0
Zm00001eb348230 Zea mays HOM05D004604 ORTHO05D005744 3.4e-136 489.6 521 50.9
CDE03G0502 Ceratophyllum demersum HOM05D004604 ORTHO05D005744 2.4e-134 483.4 498 53.4
GSVIVG01032843001 Vitis vinifera HOM05D004604 ORTHO05D005744 3.2e-134 483.0 608 47.4
Haze_17214 Corylus avellana HOM05D004604 ORTHO05D005744 4.7e-130 469.2 633 44.9
Eucgr.J00232 Eucalyptus grandis HOM05D004604 ORTHO05D005744 8.1e-130 468.4 564 48.0
vmacro06977 Vaccinium macrocarpon HOM05D004604 ORTHO05D005744 8.9e-129 464.9 632 45.7
Haze_17213 Corylus avellana HOM05D004604 ORTHO05D005744 1.9e-126 457.2 616 45.1
Gohir.D10G247400 Gossypium hirsutum HOM05D004604 ORTHO05D005744 3.5e-125 453.0 501 50.7
SEGI_40640 Sequoiadendron giganteum HOM05D004604 ORTHO05D005744 1.9e-123 447.2 623 41.6
Peaxi162Scf01208g00144 Petunia axillaris HOM05D004604 ORTHO05D005744 1.7e-119 434.1 493 49.9
Sc11g0007180 Simmondsia chinensis HOM05D004604 ORTHO05D005744 1.9e-118 430.6 519 47.6
HanXRQChr06g0172261 Helianthus annuus HOM05D004604 ORTHO05D005744 6.2e-114 415.6 465 50.1
Actinidia29693 Actinidia chinensis HOM05D004604 ORTHO05D005744 8.1e-114 415.2 609 41.9
Eucgr.J00227 Eucalyptus grandis HOM05D004604 ORTHO05D005744 6.9e-113 412.1 427 52.9
Pp3c3_24950 Physcomitrium patens HOM05D004604 ORTHO05D005744 4.5e-112 409.5 598 41.6
AagrBONN_evm.TU.Sc2ySwM_117.2751 Anthoceros agrestis HOM05D004604 ORTHO05D005744 1.9e-110 404.1 612 39.7
Thhalv10013820m.g Eutrema salsugineum HOM05D004604 ORTHO05D005744 1.0e-108 398.3 392 57.9
Mapoly0067s0057 Marchantia polymorpha HOM05D004604 ORTHO05D005744 8.7e-108 395.2 491 46.4
SEGI_28443 Sequoiadendron giganteum HOM05D004604 ORTHO05D005744 3.1e-105 386.7 477 45.3
SEGI_33236 Sequoiadendron giganteum HOM05D004604 ORTHO05D005744 3.1e-105 386.7 477 45.3
SMO118G0549 Selaginella moellendorffii HOM05D004604 ORTHO05D005744 3.5e-101 373.2 475 46.5
AUR62012235 Chenopodium quinoa HOM05D004604 ORTHO05D005744 2.4e-97 360.5 468 45.7
COL.COLO4_25696 Corchorus olitorius HOM05D004604 ORTHO05D005744 1.4e-89 334.7 599 38.7
Actinidia33931 Actinidia chinensis HOM05D004604 ORTHO05D005744 7.4e-75 285.8 611 35.4
CBR_g49483 Chara braunii HOM05D004604 ORTHO05D005744 2.2e-71 274.2 509 36.1
PRCOL_00002395 Prasinoderma coloniale HOM05D004604 ORTHO05D005744 2.9e-71 273.9 649 31.6
arahy.Tifrunner.gnm1.ann1.3RRJ97 Arachis hypogaea HOM05D004604 ORTHO05D005744 1.2e-53 215.3 363 40.8
MCO15G553 Micromonas commoda HOM05D004604 ORTHO05D005744 3.6e-53 213.8 414 32.4
HPP92_018034 Vanilla planifolia HOM05D004604 ORTHO05D005744 9.8e-51 205.7 293 43.7
Cre13.g580600 Chlamydomonas reinhardtii HOM05D004604 ORTHO05D005744 1.4e-44 185.3 246 41.9
PSO339G5386 Papaver somniferum HOM05D004604 ORTHO05D005744 5.8e-35 153.3 131 57.3
Cfa022588 Carpinus fangiana HOM05D004604 ORTHO05D005744 2.3e-23 114.8 195 34.4
Peaxi162Scf01208g00156 Petunia axillaris HOM05D004604 ORTHO05D005744 4.4e-19 100.5 59 74.6
HPP92_018033 Vanilla planifolia HOM05D004604 ORTHO05D005744 1.7e-15 88.6 159 36.5
CBR_g49485 Chara braunii HOM05D000019 ORTHO05D000048 1.6e-08 65.5 75 48.0
CDE04G1491 Ceratophyllum demersum HOM05D004604 ORTHO05D005744 5.6e-06 57.0 56 53.6


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