Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g25600 Brassica carinata HOM05D000675 ORTHO05D000395 5.8e-39 163.7 79 100.0
BcaNung00343 Brassica carinata HOM05D000675 ORTHO05D000395 4.3e-26 120.9 57 98.2
BcaB01g02520 Brassica carinata HOM05D000675 ORTHO05D000395 5.3e-16 87.4 57 71.9
BraA01t02713Z Brassica rapa HOM05D000675 ORTHO05D027218 1.1e-13 79.7 52 71.2
BcaB04g18177 Brassica carinata HOM05D000675 ORTHO05D000395 1.4e-13 79.3 51 72.5
BolC9t58655H Brassica oleracea HOM05D000675 ORTHO05D000395 1.4e-13 79.3 52 73.1
BcaC04g18662 Brassica carinata HOM05D000675 ORTHO05D000395 1.2e-12 76.3 52 71.2
BcaB05g22798 Brassica carinata HOM05D000675 ORTHO05D000395 2.7e-12 75.1 51 70.6
C07p23780 Brassica napus HOM05D000675 ORTHO05D000395 2.7e-12 75.1 52 67.3
C07p27890 Brassica napus HOM05D000675 ORTHO05D000395 2.7e-12 75.1 52 67.3
BcaC09g51112 Brassica carinata HOM05D000675 ORTHO05D000395 4.6e-12 74.3 52 67.3
BcaC01g02628 Brassica carinata HOM05D000675 ORTHO05D000395 6.0e-12 73.9 52 67.3
BcaC01g01732 Brassica carinata HOM05D000675 ORTHO05D000395 7.9e-12 73.6 71 52.1
BraA09t38562Z Brassica rapa HOM05D000675 ORTHO05D002086 7.9e-12 73.6 71 47.9
BcaC01g00314 Brassica carinata HOM05D000675 ORTHO05D000395 1.0e-11 73.2 52 63.5
BolC3t14837H Brassica oleracea HOM05D000675 ORTHO05D000395 1.0e-11 73.2 52 65.4
BcaC09g49037 Brassica carinata HOM05D000675 ORTHO05D000395 1.3e-11 72.8 52 65.4
A09p30000 Brassica napus HOM05D000675 ORTHO05D000395 1.3e-11 72.8 71 47.9
C01p31580 Brassica napus HOM05D000675 ORTHO05D013510 1.3e-11 72.8 52 65.4
BcaNung03743 Brassica carinata HOM05D000675 ORTHO05D000395 1.8e-11 72.4 51 66.7
A05p25780 Brassica napus HOM05D000675 ORTHO05D000395 1.8e-11 72.4 71 47.9
BolC6t36483H Brassica oleracea HOM05D000675 ORTHO05D032234 1.8e-11 72.4 51 66.7
BcaC09g49895 Brassica carinata HOM05D000675 ORTHO05D000395 2.3e-11 72.0 52 65.4
BcaB05g24010 Brassica carinata HOM05D000675 ORTHO05D000395 3.9e-11 71.2 51 64.7
BcaB05g22367 Brassica carinata HOM05D000675 ORTHO05D000395 6.7e-11 70.5 52 59.6
BcaC03g18179 Brassica carinata HOM05D000675 ORTHO05D000395 6.7e-11 70.5 52 67.3
A10p13650 Brassica napus HOM05D000675 ORTHO05D000395 6.7e-11 70.5 52 67.3
BraA07t31229Z Brassica rapa HOM05D000675 ORTHO05D000395 6.7e-11 70.5 52 67.3
BcaB01g01025 Brassica carinata HOM05D000675 ORTHO05D000395 1.1e-10 69.7 51 64.7
BcaB01g04057 Brassica carinata HOM05D000675 ORTHO05D000395 1.1e-10 69.7 51 64.7
BcaC05g26494 Brassica carinata HOM05D000675 ORTHO05D000395 1.1e-10 69.7 76 47.4
BcaC08g45572 Brassica carinata HOM05D000675 ORTHO05D000395 1.1e-10 69.7 75 48.0
C06p32570 Brassica napus HOM05D000675 ORTHO05D000395 1.1e-10 69.7 75 48.0
C07p33000 Brassica napus HOM05D000675 ORTHO05D000395 1.1e-10 69.7 50 66.0
C05p25460 Brassica napus HOM05D000675 ORTHO05D000395 1.5e-10 69.3 71 50.7
BraA02t08657Z Brassica rapa HOM05D000675 ORTHO05D021814 1.9e-10 68.9 71 49.3
BcaB02g11265 Brassica carinata HOM05D000675 ORTHO05D000395 2.5e-10 68.6 52 61.5
C03p78160 Brassica napus HOM05D000675 ORTHO05D000395 2.5e-10 68.6 48 66.7
BcaB06g26589 Brassica carinata HOM05D000675 ORTHO05D000395 4.3e-10 67.8 52 57.7
BcaC04g21582 Brassica carinata HOM05D000675 ORTHO05D000395 4.3e-10 67.8 52 65.4
C06p37640 Brassica napus HOM05D000675 ORTHO05D000395 4.3e-10 67.8 52 65.4
BolC2t12302H Brassica oleracea HOM05D000675 ORTHO05D000395 4.3e-10 67.8 52 65.4
BcaB04g18329 Brassica carinata HOM05D000675 ORTHO05D000395 5.6e-10 67.4 51 62.7
BcaB07g31602 Brassica carinata HOM05D000675 ORTHO05D000395 5.6e-10 67.4 52 57.7
BcaB06g27534 Brassica carinata HOM05D000675 ORTHO05D000395 9.6e-10 66.6 51 64.7
BcaC02g10278 Brassica carinata HOM05D000675 ORTHO05D000395 9.6e-10 66.6 53 62.3
A05p23390 Brassica napus HOM05D000675 ORTHO05D000395 9.6e-10 66.6 51 64.7
BraA05t21202Z Brassica rapa HOM05D000675 ORTHO05D000395 9.6e-10 66.6 51 64.7
BolC4t25936H Brassica oleracea HOM05D000675 ORTHO05D000395 1.3e-09 66.2 52 63.5
BolC8t46874H Brassica oleracea HOM05D000675 ORTHO05D000395 1.3e-09 66.2 52 63.5
BcaB03g15207 Brassica carinata HOM05D000675 ORTHO05D000395 1.6e-09 65.9 57 56.1
BcaC09g51286 Brassica carinata HOM05D000675 ORTHO05D000395 2.1e-09 65.5 51 64.7
A06p22650 Brassica napus HOM05D000675 ORTHO05D000395 2.1e-09 65.5 51 64.7
A08p09110 Brassica napus HOM05D000675 ORTHO05D000395 2.1e-09 65.5 68 51.5
C01p14780 Brassica napus HOM05D000675 ORTHO05D000395 2.1e-09 65.5 51 64.7
BcaC01g02919 Brassica carinata HOM05D000675 ORTHO05D000395 2.8e-09 65.1 71 47.9
BcaB05g24177 Brassica carinata HOM05D000675 ORTHO05D000395 4.8e-09 64.3 52 55.8
BcaB07g32139 Brassica carinata HOM05D000675 ORTHO05D000395 6.2e-09 63.9 70 44.3
BcaB05g24643 Brassica carinata HOM05D000675 ORTHO05D000395 8.1e-09 63.5 71 46.5
C04p36560 Brassica napus HOM05D000675 ORTHO05D000395 1.1e-08 63.2 52 61.5
BolC4t25141H Brassica oleracea HOM05D000675 ORTHO05D000395 1.1e-08 63.2 52 61.5
Thhalv10012358m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 1.4e-08 62.8 50 56.0
BcaC01g05607 Brassica carinata HOM05D000675 ORTHO05D000395 1.8e-08 62.4 52 59.6
BcaB06g25860 Brassica carinata HOM05D000675 ORTHO05D000395 2.4e-08 62.0 71 42.3
BcaC08g45974 Brassica carinata HOM05D000675 ORTHO05D000395 2.4e-08 62.0 53 60.4
A09p50420 Brassica napus HOM05D000675 ORTHO05D000395 3.1e-08 61.6 70 48.6
SpUn1900_0010 Schrenkiella parvula HOM05D000675 ORTHO05D000395 4.0e-08 61.2 59 54.2
BcaB02g11112 Brassica carinata HOM05D000675 ORTHO05D000395 5.3e-08 60.8 51 60.8
BcaC02g09792 Brassica carinata HOM05D000675 ORTHO05D000395 5.3e-08 60.8 52 59.6
BolC7t40834H Brassica oleracea HOM05D000675 ORTHO05D000395 5.3e-08 60.8 52 51.9
AT1G36970 Arabidopsis thaliana HOM05D000675 ORTHO05D000395 9.0e-08 60.1 70 45.7
BcaB03g16231 Brassica carinata HOM05D000675 ORTHO05D000395 1.2e-07 59.7 52 55.8
BolC4t25530H Brassica oleracea HOM05D000675 ORTHO05D000395 1.2e-07 59.7 51 52.9
BcaC02g12835 Brassica carinata HOM05D000675 ORTHO05D000395 2.0e-07 58.9 52 53.8
A04p05490 Brassica napus HOM05D000675 ORTHO05D000395 2.0e-07 58.9 44 65.9
C04p39370 Brassica napus HOM05D000675 ORTHO05D000395 2.0e-07 58.9 52 53.8
BolC4t25504H Brassica oleracea HOM05D000675 ORTHO05D000395 2.0e-07 58.9 52 53.8
BcaB04g20306 Brassica carinata HOM05D000675 ORTHO05D000395 2.6e-07 58.5 57 49.1
BcaC01g03691 Brassica carinata HOM05D000675 ORTHO05D000395 2.6e-07 58.5 57 49.1
A09p30140 Brassica napus HOM05D000675 ORTHO05D000395 2.6e-07 58.5 51 56.9
C03p49550 Brassica napus HOM05D000675 ORTHO05D040856 2.6e-07 58.5 57 49.1
BolC3t17251H Brassica oleracea HOM05D000675 ORTHO05D000395 2.6e-07 58.5 57 49.1
C03p68450 Brassica napus HOM05D000675 ORTHO05D000395 3.4e-07 58.2 51 52.9
BolC3t19077H Brassica oleracea HOM05D000675 ORTHO05D000395 3.4e-07 58.2 51 52.9
CARHR283870 Cardamine hirsuta HOM05D000675 ORTHO05D000395 4.5e-07 57.8 50 58.0
BcaB06g27042 Brassica carinata HOM05D000675 ORTHO05D000395 5.8e-07 57.4 52 53.8
Thhalv10024008m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 5.8e-07 57.4 51 54.9
CARHR035130 Cardamine hirsuta HOM05D000675 ORTHO05D000395 7.6e-07 57.0 47 57.4
Thhalv10002316m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 7.6e-07 57.0 52 51.9
Thhalv10029439m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 7.6e-07 57.0 57 56.1
Thhalv10029293m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 9.9e-07 56.6 53 50.9
BcaNung03607 Brassica carinata HOM05D000675 ORTHO05D000395 1.3e-06 56.2 57 47.4
C04p65980 Brassica napus HOM05D000675 ORTHO05D000395 1.3e-06 56.2 51 52.9
Thhalv10024063m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 1.3e-06 56.2 53 52.8
BcaC03g14557 Brassica carinata HOM05D000675 ORTHO05D000395 1.7e-06 55.8 44 59.1
BcaC05g29077 Brassica carinata HOM05D000675 ORTHO05D031848 1.7e-06 55.8 52 48.1
BcaC02g09163 Brassica carinata HOM05D000675 ORTHO05D000395 2.2e-06 55.5 52 51.9
BolC7t41640H Brassica oleracea HOM05D000675 ORTHO05D000395 2.2e-06 55.5 38 65.8
BraA10t43278Z Brassica rapa HOM05D000675 ORTHO05D000395 2.2e-06 55.5 57 47.4
Thhalv10015254m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 2.9e-06 55.1 51 54.9
A07p03550 Brassica napus HOM05D000675 ORTHO05D033415 4.9e-06 54.3 55 49.1
C06p46010 Brassica napus HOM05D000675 ORTHO05D000395 4.9e-06 54.3 57 45.6
BcaC02g11195 Brassica carinata HOM05D000675 ORTHO05D000395 6.4e-06 53.9 51 49.0
C04p19400 Brassica napus HOM05D000675 ORTHO05D000395 6.4e-06 53.9 51 49.0
BolC4t24606H Brassica oleracea HOM05D000675 ORTHO05D000395 6.4e-06 53.9 42 61.9
Carub.0001s3338 Capsella rubella HOM05D000675 ORTHO05D000395 6.4e-06 53.9 70 41.4
BcaB04g17831 Brassica carinata HOM05D000675 ORTHO05D000395 8.4e-06 53.5 52 48.1
C04p10840 Brassica napus HOM05D000675 ORTHO05D000395 8.4e-06 53.5 47 53.2


User provided reference genes

Program Settings