Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g25580 Brassica carinata HOM05D000307 ORTHO05D000166 4.9e-114 414.5 205 100.0
BcaB06g25577 Brassica carinata HOM05D000307 ORTHO05D000166 3.4e-107 391.7 231 87.0
BcaB06g25575 Brassica carinata HOM05D000307 ORTHO05D000166 4.7e-101 371.3 224 85.7
BcaB06g25582 Brassica carinata HOM05D000307 ORTHO05D000166 1.2e-99 366.7 224 84.8
A05p37540 Brassica napus HOM05D000307 ORTHO05D000166 3.5e-80 302.0 223 73.1
BraA05t22552Z Brassica rapa HOM05D000307 ORTHO05D000166 2.5e-78 295.8 224 72.3
C05p56100 Brassica napus HOM05D000307 ORTHO05D000166 3.6e-77 292.0 223 70.9
BolC5t34277H Brassica oleracea HOM05D000307 ORTHO05D000166 3.6e-77 292.0 223 70.9
BcaC05g29328 Brassica carinata HOM05D000307 ORTHO05D000166 4.0e-76 288.5 224 71.4
Thhalv10022157m.g Eutrema salsugineum HOM05D000307 ORTHO05D000166 1.3e-42 177.2 226 49.6
Sp3g10030 Schrenkiella parvula HOM05D000307 ORTHO05D000166 1.3e-37 160.6 228 45.6
Sp3g10040 Schrenkiella parvula HOM05D000307 ORTHO05D000166 1.4e-36 157.1 227 47.1
AL3G39810 Arabidopsis lyrata HOM05D000307 ORTHO05D000166 5.0e-34 148.7 226 43.8
BcaB06g25581 Brassica carinata HOM05D000492 ORTHO05D000166 5.0e-34 148.7 82 95.1
Carub.0003s2592 Capsella rubella HOM05D000307 ORTHO05D000166 5.5e-33 145.2 201 47.8
AT2G40210 Arabidopsis thaliana HOM05D000307 ORTHO05D000166 1.2e-30 137.5 229 41.5
Thhalv10021945m.g Eutrema salsugineum HOM05D000307 ORTHO05D000166 4.8e-29 132.1 172 48.3
Thhalv10027229m.g Eutrema salsugineum HOM05D000307 ORTHO05D000166 2.4e-28 129.8 229 41.0
Carub.0003s2942 Capsella rubella HOM05D000307 ORTHO05D000166 4.2e-25 119.0 215 39.5
AT2G15660 Arabidopsis thaliana HOM05D000307 ORTHO05D000166 1.8e-23 113.6 199 39.7
CARHR086360 Cardamine hirsuta HOM05D000307 ORTHO05D000166 1.2e-22 110.9 230 37.8
BcaC05g29324 Brassica carinata HOM05D000307 ORTHO05D000166 4.1e-20 102.4 75 80.0
BcaC05g29326 Brassica carinata HOM05D000307 ORTHO05D000166 4.1e-20 102.4 75 80.0
AT2G26880 Arabidopsis thaliana HOM05D000307 ORTHO05D000166 1.2e-19 100.9 188 39.4
Carub.0004s0776 Capsella rubella HOM05D000307 ORTHO05D000166 1.0e-18 97.8 192 34.9
Aa31LG3G5290 Aethionema arabicum HOM05D000307 ORTHO05D000166 2.7e-11 73.2 230 30.0
Carub.0007s2958 Capsella rubella HOM05D000307 ORTHO05D000166 2.3e-10 70.1 126 41.3
THA.LOC104809945 Tarenaya hassleriana HOM05D000307 ORTHO05D000166 2.1e-08 63.5 224 29.5
Carub.0004s0946 Capsella rubella HOM05D000307 ORTHO05D000166 4.7e-08 62.4 119 38.7
THA.LOC104827443 Tarenaya hassleriana HOM05D000307 ORTHO05D000166 8.0e-08 61.6 221 31.7


User provided reference genes

Program Settings