Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g25552 Brassica carinata HOM05D007056 ORTHO05D008278 1.4e-147 526.2 256 100.0
A05p37300 Brassica napus HOM05D007056 ORTHO05D008278 3.2e-131 471.9 258 92.6
BcaC05g29295 Brassica carinata HOM05D007056 ORTHO05D008278 3.6e-130 468.4 257 91.8
BraA05t22526Z Brassica rapa HOM05D007056 ORTHO05D008278 1.4e-129 466.5 256 92.6
C05p55770 Brassica napus HOM05D007056 ORTHO05D008278 8.8e-129 463.8 258 91.5
BolC5t34244H Brassica oleracea HOM05D007056 ORTHO05D008278 8.8e-129 463.8 258 91.5
Sp3g10270 Schrenkiella parvula HOM05D007056 ORTHO05D008278 9.7e-128 460.3 258 89.1
Thhalv10021378m.g Eutrema salsugineum HOM05D007056 ORTHO05D008278 3.6e-122 441.8 258 86.4
AT3G12040 Arabidopsis thaliana HOM05D007056 ORTHO05D008278 1.0e-121 440.3 259 85.3
Carub.0003s1138 Capsella rubella HOM05D007056 ORTHO05D008278 9.7e-120 433.7 258 84.5
CARHR086600 Cardamine hirsuta HOM05D007056 ORTHO05D008278 9.7e-120 433.7 256 85.5
AL3G23650 Arabidopsis lyrata HOM05D007056 ORTHO05D008278 1.4e-118 429.9 259 84.6
Aa31sc80G100 Aethionema arabicum HOM05D007056 ORTHO05D008278 2.2e-108 396.0 258 78.3
Potri.016G060000 Populus trichocarpa HOM05D007056 ORTHO05D008278 2.5e-99 365.9 262 69.8
THA.LOC104809936 Tarenaya hassleriana HOM05D007056 ORTHO05D008278 2.5e-99 365.9 265 71.7
Lj1g0028043 Lotus japonicus HOM05D007056 ORTHO05D008278 1.4e-97 360.1 234 74.4
Lalb_Chr18g0048001 Lupinus albus HOM05D007056 ORTHO05D008278 1.4e-97 360.1 236 72.9
Prupe.7G080200 Prunus persica HOM05D007056 ORTHO05D008278 3.0e-97 359.0 201 83.6
Duzib093G0790 Durio zibethinus HOM05D007056 ORTHO05D008278 1.2e-96 357.1 197 83.2
Gorai.012G099400 Gossypium raimondii HOM05D007056 ORTHO05D008278 2.0e-96 356.3 251 70.1
TWI77G0776 Tripterygium wilfordii HOM05D007056 ORTHO05D008278 3.4e-96 355.5 203 80.8
RcHm_v2.0_Chr3g0479281 Rosa chinensis HOM05D007056 ORTHO05D008278 4.4e-96 355.1 253 68.8
Gohir.D04G089300 Gossypium hirsutum HOM05D007056 ORTHO05D008278 5.7e-96 354.8 251 70.1
QL07p024320 Quercus lobata HOM05D007056 ORTHO05D008278 5.7e-96 354.8 208 79.3
QL07p024358 Quercus lobata HOM05D007056 ORTHO05D008278 5.7e-96 354.8 208 79.3
Glyma.19G149400 Glycine max HOM05D007056 ORTHO05D008278 7.5e-96 354.4 252 71.8
VMungo1383G1827 Vigna mungo HOM05D007056 ORTHO05D008278 7.5e-96 354.4 202 81.7
Cfa020149 Carpinus fangiana HOM05D007056 ORTHO05D008278 2.2e-95 352.8 208 78.8
Ca_08534_v3 Cicer arietinum L. HOM05D007056 ORTHO05D008278 3.7e-95 352.1 195 83.1
FAN09G4108 Fragaria x ananassa HOM05D007056 ORTHO05D008278 3.7e-95 352.1 259 67.6
Nn2g15729 Nelumbo nucifera HOM05D007056 ORTHO05D008278 6.3e-95 351.3 257 67.7
Phvul.001G143900 Phaseolus vulgaris HOM05D007056 ORTHO05D008278 6.3e-95 351.3 200 82.0
Atru.chr8.1149 Acer truncatum HOM05D007056 ORTHO05D008278 8.3e-95 350.9 222 75.7
Sabra16G0062800 Salix brachista HOM05D007056 ORTHO05D008278 1.8e-94 349.7 261 67.4
Ciclev10012466m.g Citrus clementina HOM05D007056 ORTHO05D008278 2.4e-94 349.4 224 74.6
MD14G1054600 Malus domestica HOM05D007056 ORTHO05D008278 2.4e-94 349.4 261 66.3
EL10Ac3g06891 Beta vulgaris HOM05D007056 ORTHO05D008278 3.1e-94 349.0 225 73.3
FAN14G2508 Fragaria x ananassa HOM05D007056 ORTHO05D008278 4.1e-94 348.6 257 66.1
Cpa.g.sc85.61 Carica papaya HOM05D007056 ORTHO05D008278 5.4e-94 348.2 260 66.5
Actinidia38590 Actinidia chinensis HOM05D007056 ORTHO05D008278 7.0e-94 347.8 259 66.4
PGR142G3072 Punica granatum HOM05D007056 ORTHO05D008278 7.0e-94 347.8 197 81.2
AUR62011999 Chenopodium quinoa HOM05D007056 ORTHO05D008278 9.1e-94 347.4 252 68.7
CSS0008084 Camellia sinensis var. sinensis HOM05D007056 ORTHO05D008278 1.2e-93 347.1 196 82.1
arahy.Tifrunner.gnm1.ann1.DK1M71 Arachis hypogaea HOM05D007056 ORTHO05D008278 2.0e-93 346.3 231 71.4
CANSAT64G0992 Cannabis sativa HOM05D007056 ORTHO05D008278 3.5e-93 345.5 253 68.4
CiPaw.09G028900 Carya illinoinensis HOM05D007056 ORTHO05D008278 3.5e-93 345.5 216 75.0
Zm00001eb256530 Zea mays HOM05D007056 ORTHO05D008278 3.5e-93 345.5 215 76.7
Lj2A365G87 Lonicera japonica HOM05D007056 ORTHO05D008278 1.0e-92 344.0 199 78.9
Thecc.05G174400 Theobroma cacao HOM05D007056 ORTHO05D008278 1.0e-92 344.0 260 66.2
Os02g0774500 Oryza sativa ssp. japonica HOM05D007056 ORTHO05D008278 1.3e-92 343.6 244 68.9
CsaV3_3G038650 Cucumis sativus L. HOM05D007056 ORTHO05D008278 1.7e-92 343.2 232 70.7
arahy.Tifrunner.gnm1.ann1.LTU6F0 Arachis hypogaea HOM05D007056 ORTHO05D008278 2.3e-92 342.8 231 71.0
TAR369G0080 Trochodendron aralioides HOM05D007056 ORTHO05D008278 2.3e-92 342.8 257 64.6
Medtr7g093540 Medicago truncatula HOM05D007056 ORTHO05D008278 2.9e-92 342.4 249 68.7
BcaB06g25551 Brassica carinata HOM05D007056 ORTHO05D008278 3.8e-92 342.0 166 95.8
COL.COLO4_05956 Corchorus olitorius HOM05D007056 ORTHO05D008278 5.0e-92 341.7 207 76.3
Aqoxy2G00097 Aquilegia oxysepala HOM05D007056 ORTHO05D008278 1.1e-91 340.5 254 66.9
Ah.04g152820 Amaranthus hybridus HOM05D007056 ORTHO05D008278 1.5e-91 340.1 251 68.9
SGA_v2.0_scaffold69G23055 Striga asiatica HOM05D007056 ORTHO05D008278 1.5e-91 340.1 258 64.7
HanXRQChr01g0010031 Helianthus annuus HOM05D007056 ORTHO05D008278 1.9e-91 339.7 240 67.5
Dinv16370 Davidia involucrata HOM05D007056 ORTHO05D008278 4.2e-91 338.6 254 64.6
AUR62015338 Chenopodium quinoa HOM05D007056 ORTHO05D008278 9.5e-91 337.4 253 67.6
ATR0598G297 Amborella trichopoda HOM05D007056 ORTHO05D008278 1.2e-90 337.0 196 78.6
Cc06_g15700 Coffea canephora HOM05D007056 ORTHO05D008278 1.6e-90 336.7 196 79.6
Eucgr.K01848 Eucalyptus grandis HOM05D007056 ORTHO05D008278 2.8e-90 335.9 197 78.2
MBI19_g17420_MAGBIO Magnolia biondii HOM05D007056 ORTHO05D008278 8.0e-90 334.3 252 67.1
CAN.G128.50 Capsicum annuum HOM05D007056 ORTHO05D008278 1.0e-89 334.0 198 79.8
Sopen10g031100 Solanum pennellii HOM05D007056 ORTHO05D008278 5.2e-89 331.6 267 65.2
PGSC0003DMG400023706 Solanum tuberosum HOM05D007056 ORTHO05D008278 5.2e-89 331.6 267 65.2
Nitab4.5_0001079g0030 Nicotiana tabacum HOM05D007056 ORTHO05D008278 8.9e-89 330.9 198 77.3
Rhsim04G0094900 Rhododendron simsii HOM05D007056 ORTHO05D008278 3.4e-88 328.9 199 75.9
Solyc10g080560.2 Solanum lycopersicum HOM05D007056 ORTHO05D008278 4.4e-88 328.6 267 63.7
Lsat_1_v5_gn_5_165300 Lactuca sativa HOM05D007056 ORTHO05D008278 5.7e-88 328.2 197 77.2
TPR.G35780 Trifolium pratense HOM05D007056 ORTHO05D008278 9.8e-88 327.4 243 66.7
HPP92_004381 Vanilla planifolia HOM05D007056 ORTHO05D008278 9.8e-88 327.4 196 79.1
GSVIVG01033475001 Vitis vinifera HOM05D007056 ORTHO05D008278 2.4e-86 322.8 278 62.6
DCAR_019779 Daucus carota HOM05D007056 ORTHO05D008278 3.1e-86 322.4 229 68.6
CDE06G2434 Ceratophyllum demersum HOM05D007056 ORTHO05D008278 2.3e-84 316.2 196 71.9
AagrBONN_evm.TU.Sc2ySwM_344.2853 Anthoceros agrestis HOM05D007056 ORTHO05D008278 6.6e-84 314.7 201 73.1
SMO146G0068 Selaginella moellendorffii HOM05D007056 ORTHO05D008278 6.6e-84 314.7 234 65.4
Peaxi162Scf00249g01221 Petunia axillaris HOM05D007056 ORTHO05D008278 8.6e-84 314.3 264 61.0
unitig_27.g25110 Utricularia gibba HOM05D007056 ORTHO05D008278 1.1e-83 313.9 248 61.7
Hund24814 Selenicereus undatus HOM05D007056 ORTHO05D008278 5.6e-83 311.6 243 66.3
SEGI_25756 Sequoiadendron giganteum HOM05D007056 ORTHO05D008278 5.6e-83 311.6 197 73.1
Mapoly0003s0280 Marchantia polymorpha HOM05D007056 ORTHO05D008278 9.5e-83 310.8 192 74.5
PSO541G5037 Papaver somniferum HOM05D007056 ORTHO05D008278 2.0e-77 293.1 243 61.7
Aqoxy3G01855 Aquilegia oxysepala HOM05D007056 ORTHO05D008278 3.5e-77 292.4 238 62.2
Pp3c1_41490 Physcomitrium patens HOM05D007056 ORTHO05D008278 1.0e-76 290.8 198 69.2
ECA248G2501 Erigeron canadensis HOM05D007056 ORTHO05D008278 2.3e-76 289.7 174 77.0
PSO675G9168 Papaver somniferum HOM05D007056 ORTHO05D008278 5.0e-76 288.5 262 58.4
Psat3g067120 Pisum sativum HOM05D007056 ORTHO05D008278 9.5e-75 284.3 167 77.2
CBR_g48019 Chara braunii HOM05D000019 ORTHO05D000002 3.4e-72 275.8 186 68.8
FvH4_6g21980 Fragaria vesca HOM05D007056 ORTHO05D008278 3.4e-72 275.8 205 64.9
ECA248G2516 Erigeron canadensis HOM05D007056 ORTHO05D008278 6.4e-71 271.6 161 77.0
Oeu024494.3 Olea europaea HOM05D007056 ORTHO05D008278 1.0e-68 264.2 229 60.3
vmacro22110 Vaccinium macrocarpon HOM05D007056 ORTHO05D008278 1.0e-68 264.2 276 50.7
Sed0027134 Sechium edule HOM05D007056 ORTHO05D008278 6.6e-68 261.5 209 64.6
Gohir.A04G057300 Gossypium hirsutum HOM05D007056 ORTHO05D008278 1.6e-58 230.3 181 66.3
Psat3g067080 Pisum sativum HOM05D007056 ORTHO05D008278 4.9e-55 218.8 177 62.7
Migut.J01851 Erythranthe guttata HOM05D007056 ORTHO05D008278 3.9e-52 209.1 121 78.5
ECA248G3402 Erigeron canadensis HOM05D000009 ORTHO05D000008 2.8e-50 203.0 122 75.4
ClCG10G017660 Citrullus lanatus HOM05D007056 ORTHO05D008278 3.6e-50 202.6 197 56.3
Psat3g067040 Pisum sativum HOM05D007056 ORTHO05D008278 2.6e-48 196.4 235 49.8
Manes.08G042900 Manihot esculenta HOM05D007056 ORTHO05D008278 1.2e-45 187.6 161 60.2
FAN02G0430 Fragaria x ananassa HOM05D007056 ORTHO05D008278 3.0e-44 183.0 163 58.3
MELO3C009610.2 Cucumis melo HOM05D007056 ORTHO05D008278 1.1e-43 181.0 236 45.3
Sc13g0002370 Simmondsia chinensis HOM05D007056 ORTHO05D008278 2.0e-40 170.2 165 53.9
Haze_20013 Corylus avellana HOM05D007056 ORTHO05D008278 3.8e-39 166.0 437 30.4
Nitab4.5_0001440g0050 Nicotiana tabacum HOM05D007056 ORTHO05D008278 9.6e-35 151.4 97 73.2
PRCOL_00003183 Prasinoderma coloniale HOM05D007056 ORTHO05D008278 3.7e-34 149.4 216 44.0
ECA233G2032 Erigeron canadensis HOM05D007056 ORTHO05D008278 3.0e-28 129.8 78 74.4
Hma1.2p1_0645F.1_g194860 Hydrangea macrophylla HOM05D007056 ORTHO05D008278 5.1e-28 129.0 73 79.5
SHI31778 Sapria himalayana HOM05D007056 ORTHO05D008278 4.8e-26 122.5 76 72.4
vmacro22990 Vaccinium macrocarpon HOM05D007056 ORTHO05D008278 1.1e-14 84.7 96 45.8
SHI31775 Sapria himalayana HOM05D000002 ORTHO05D000001 3.2e-06 56.6 37 70.3


User provided reference genes

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