Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g25504 Brassica carinata HOM05D007968 ORTHO05D010203 1.7e-94 349.4 178 100.0
A05p36620 Brassica napus HOM05D007968 ORTHO05D010203 5.0e-83 311.2 178 91.0
BraA05t22464Z Brassica rapa HOM05D007968 ORTHO05D010203 5.0e-83 311.2 178 91.0
BcaC05g29230 Brassica carinata HOM05D007968 ORTHO05D010203 4.6e-76 288.1 177 85.9
Thhalv10022116m.g Eutrema salsugineum HOM05D007968 ORTHO05D010203 8.6e-75 283.9 174 83.9
Sp3g11020 Schrenkiella parvula HOM05D007968 ORTHO05D010203 2.0e-71 272.7 179 79.9
CARHR087400 Cardamine hirsuta HOM05D007968 ORTHO05D010203 1.4e-64 250.0 175 73.7
AL3G24550 Arabidopsis lyrata HOM05D007968 ORTHO05D010203 1.4e-61 240.0 175 70.9
Carub.0003s1224 Capsella rubella HOM05D007968 ORTHO05D010203 5.4e-61 238.0 175 69.7
C05p55050 Brassica napus HOM05D007968 ORTHO05D010203 1.3e-59 233.4 142 85.9
BolC5t34173H Brassica oleracea HOM05D007968 ORTHO05D010203 1.3e-59 233.4 142 85.9
AT3G12880 Arabidopsis thaliana HOM05D007968 ORTHO05D010203 1.7e-59 233.0 175 69.1
BraA01t04100Z Brassica rapa HOM05D007968 ORTHO05D024441 6.1e-28 128.3 89 77.5
A01p40660 Brassica napus HOM05D007968 ORTHO05D024441 1.0e-27 127.5 89 77.5
THA.LOC104822174 Tarenaya hassleriana HOM05D007968 ORTHO05D010203 1.7e-22 110.2 156 37.8
Potri.007G068300 Populus trichocarpa HOM05D007968 ORTHO05D010203 2.2e-22 109.8 173 38.7
C01p52270 Brassica napus HOM05D007968 ORTHO05D024441 3.2e-21 105.9 71 77.5
BcaC09g48273 Brassica carinata HOM05D007968 ORTHO05D024441 9.4e-21 104.4 73 74.0
BolC1t05166H Brassica oleracea HOM05D007968 ORTHO05D024441 9.4e-21 104.4 73 74.0
CARHR043880 Cardamine hirsuta HOM05D007968 ORTHO05D010203 1.6e-20 103.6 168 38.1
Carub.0006s3590 Capsella rubella HOM05D007968 ORTHO05D010203 2.1e-20 103.2 173 34.7
Sabra07G0056100 Salix brachista HOM05D007968 ORTHO05D010203 7.9e-20 101.3 155 37.4
Manes.14G011600 Manihot esculenta HOM05D007968 ORTHO05D010203 1.4e-19 100.5 154 36.4
Gohir.A11G292000 Gossypium hirsutum HOM05D007968 ORTHO05D010203 3.0e-19 99.4 153 37.3
Ciclev10006004m.g Citrus clementina HOM05D007968 ORTHO05D010203 5.1e-19 98.6 156 37.8
COL.COLO4_38368 Corchorus olitorius HOM05D007968 ORTHO05D010203 6.7e-19 98.2 177 35.0
AL1G64370 Arabidopsis lyrata HOM05D007968 ORTHO05D010203 3.3e-18 95.9 168 37.5
AL6G52570 Arabidopsis lyrata HOM05D007968 ORTHO05D010203 4.4e-18 95.5 168 35.7
Gorai.007G336600 Gossypium raimondii HOM05D007968 ORTHO05D010203 5.7e-18 95.1 173 35.3
Gohir.D11G300400 Gossypium hirsutum HOM05D007968 ORTHO05D010203 2.8e-17 92.8 173 35.3
Sp1g41750 Schrenkiella parvula HOM05D007968 ORTHO05D010203 3.7e-17 92.4 177 37.3
Duzib213G0484 Durio zibethinus HOM05D007968 ORTHO05D010203 8.2e-17 91.3 163 33.7
TWI38G1770 Tripterygium wilfordii HOM05D007968 ORTHO05D010203 8.2e-17 91.3 157 33.8
AT4G00872 Arabidopsis thaliana HOM05D007968 ORTHO05D010203 1.1e-16 90.9 168 35.1
Thecc.07G160500 Theobroma cacao HOM05D007968 ORTHO05D010203 1.1e-16 90.9 155 34.2
CARHR045840 Cardamine hirsuta HOM05D007968 ORTHO05D010203 1.8e-16 90.1 174 33.9
Carub.0001s4453 Capsella rubella HOM05D007968 ORTHO05D010203 4.1e-16 89.0 180 35.6
Cfa019410 Carpinus fangiana HOM05D007968 ORTHO05D010203 6.9e-16 88.2 175 31.4
CARHR044320 Cardamine hirsuta HOM05D007968 ORTHO05D010203 9.1e-16 87.8 166 33.7
Gohir.A11G291800 Gossypium hirsutum HOM05D007968 ORTHO05D010203 2.0e-15 86.7 154 31.8
BcaC08g43678 Brassica carinata HOM05D007968 ORTHO05D010203 2.6e-15 86.3 174 33.3
Gohir.A11G291900 Gossypium hirsutum HOM05D007968 ORTHO05D010203 4.5e-15 85.5 176 31.8
BolC6t36179H Brassica oleracea HOM05D007968 ORTHO05D010203 5.9e-15 85.1 177 32.8
Thhalv10011943m.g Eutrema salsugineum HOM05D007968 ORTHO05D010203 5.9e-15 85.1 170 35.3
Gorai.007G336400 Gossypium raimondii HOM05D007968 ORTHO05D010203 7.7e-15 84.7 153 31.4
CARHR045850 Cardamine hirsuta HOM05D007968 ORTHO05D010203 1.3e-14 84.0 165 30.9
BcaB07g33167 Brassica carinata HOM05D007968 ORTHO05D010203 3.8e-14 82.4 174 33.3
Gohir.D11G300503 Gossypium hirsutum HOM05D007968 ORTHO05D010203 6.5e-14 81.6 153 30.7
Haze_07836 Corylus avellana HOM05D007968 ORTHO05D010203 1.1e-13 80.9 174 29.3
QL04p077228 Quercus lobata HOM05D007968 ORTHO05D010203 1.1e-13 80.9 172 29.1
BraSC56t46384Z Brassica rapa HOM05D007968 ORTHO05D010203 1.4e-13 80.5 183 31.7
TAR365G1166 Trochodendron aralioides HOM05D007968 ORTHO05D010203 1.9e-13 80.1 157 35.0
PSO210G7553 Papaver somniferum HOM05D007968 ORTHO05D010203 4.2e-13 79.0 155 31.6
PSO447G0373 Papaver somniferum HOM05D007968 ORTHO05D010203 1.6e-12 77.0 155 31.0
CiPaw.11G064900 Carya illinoinensis HOM05D007968 ORTHO05D010203 4.7e-12 75.5 156 29.5
Aa31LG10G150 Aethionema arabicum HOM05D007968 ORTHO05D010203 2.3e-11 73.2 166 34.3
PSO761G0418 Papaver somniferum HOM05D007968 ORTHO05D010203 3.9e-11 72.4 124 35.5
AL7G39620 Arabidopsis lyrata HOM05D007968 ORTHO05D010203 5.2e-11 72.0 161 31.1
C06p10970 Brassica napus HOM05D007968 ORTHO05D010203 4.4e-10 68.9 170 29.4
Gorai.007G336500 Gossypium raimondii HOM05D007968 ORTHO05D010203 9.7e-10 67.8 139 31.7
CANSAT80G0444 Cannabis sativa HOM05D007968 ORTHO05D010203 2.8e-09 66.2 155 28.4
Thhalv10026370m.g Eutrema salsugineum HOM05D007968 ORTHO05D010203 3.7e-09 65.9 163 27.6
AT4G15750 Arabidopsis thaliana HOM05D007968 ORTHO05D010203 8.2e-09 64.7 169 28.4
AT1G56100 Arabidopsis thaliana HOM05D007968 ORTHO05D010203 5.3e-08 62.0 70 44.3
AL7G39610 Arabidopsis lyrata HOM05D007968 ORTHO05D010203 1.6e-07 60.5 151 26.5


User provided reference genes

Program Settings