Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g25436 Brassica carinata HOM05D007444 ORTHO05D009359 6.5e-125 451.1 256 100.0
C05p54050 Brassica napus HOM05D007444 ORTHO05D009359 2.8e-112 409.1 279 87.5
BolC5t34070H Brassica oleracea HOM05D007444 ORTHO05D009359 2.8e-112 409.1 279 87.5
BraA05t22371Z Brassica rapa HOM05D007444 ORTHO05D009359 1.2e-94 350.5 241 76.8
A05p35640 Brassica napus HOM05D007444 ORTHO05D009359 7.7e-94 347.8 239 77.0
AL3G25850 Arabidopsis lyrata HOM05D007444 ORTHO05D009359 1.5e-81 307.0 278 63.3
Sp3g11980 Schrenkiella parvula HOM05D007444 ORTHO05D009359 9.8e-81 304.3 288 63.9
Thhalv10021210m.g Eutrema salsugineum HOM05D007444 ORTHO05D009359 3.9e-77 292.4 287 64.1
AT3G13780 Arabidopsis thaliana HOM05D007444 ORTHO05D009359 1.5e-68 263.8 231 64.5
CARHR088510 Cardamine hirsuta HOM05D007444 ORTHO05D009359 1.2e-67 260.8 238 63.4
THA.LOC104815643 Tarenaya hassleriana HOM05D007444 ORTHO05D009359 6.8e-66 255.0 292 55.5
Carub.0003s1330 Capsella rubella HOM05D007444 ORTHO05D009359 2.2e-64 250.0 241 61.4
Aa31LG8G960 Aethionema arabicum HOM05D007444 ORTHO05D009359 1.1e-63 247.7 219 61.2
Duzib235G0092 Durio zibethinus HOM05D007444 ORTHO05D009359 8.1e-51 204.9 237 48.1
FAN14G4700 Fragaria x ananassa HOM05D007444 ORTHO05D009359 1.3e-48 197.6 284 41.5
FvH4_6g33680 Fragaria vesca HOM05D007444 ORTHO05D009359 2.4e-47 193.4 237 46.4
FAN09G3948 Fragaria x ananassa HOM05D007444 ORTHO05D009359 2.7e-46 189.9 291 39.2
COL.COLO4_30661 Corchorus olitorius HOM05D007444 ORTHO05D009359 3.5e-46 189.5 183 52.5
Gohir.D06G198800 Gossypium hirsutum HOM05D007444 ORTHO05D009359 6.0e-46 188.7 177 54.2
Gorai.010G231700 Gossypium raimondii HOM05D007444 ORTHO05D009359 1.3e-45 187.6 177 54.2
Eucgr.F03140 Eucalyptus grandis HOM05D007444 ORTHO05D009359 5.1e-45 185.7 288 43.4
Nitab4.5_0005918g0020 Nicotiana tabacum HOM05D007444 ORTHO05D009359 6.6e-45 185.3 307 42.3
Hund20831 Selenicereus undatus HOM05D007444 ORTHO05D009359 1.5e-44 184.1 227 44.5
RcHm_v2.0_Chr2g0143591 Rosa chinensis HOM05D007444 ORTHO05D009359 1.9e-44 183.7 247 44.1
Gohir.A06G190400 Gossypium hirsutum HOM05D007444 ORTHO05D009359 4.3e-44 182.6 177 52.0
Ah.08g216430 Amaranthus hybridus HOM05D007444 ORTHO05D009359 1.3e-43 181.0 213 43.7
Nitab4.5_0000255g0240 Nicotiana tabacum HOM05D007444 ORTHO05D009359 1.6e-43 180.6 259 40.2
Medtr2g099820 Medicago truncatula HOM05D007444 ORTHO05D009359 3.6e-43 179.5 231 43.7
PGSC0003DMG400004847 Solanum tuberosum HOM05D007444 ORTHO05D009359 8.1e-43 178.3 183 48.1
TWI36G0277 Tripterygium wilfordii HOM05D007444 ORTHO05D009359 8.1e-43 178.3 193 50.8
TWI36G1725 Tripterygium wilfordii HOM05D007444 ORTHO05D009359 8.1e-43 178.3 193 50.8
Prupe.3G047900 Prunus persica HOM05D007444 ORTHO05D009359 1.1e-42 177.9 259 42.1
Ca_01210_v3 Cicer arietinum L. HOM05D007444 ORTHO05D009359 1.8e-42 177.2 230 44.3
Lj9A520T86 Lonicera japonica HOM05D007444 ORTHO05D009359 2.4e-42 176.8 256 43.0
Sc12g0010310 Simmondsia chinensis HOM05D007444 ORTHO05D009359 2.4e-42 176.8 238 43.7
Sopen06g022180 Solanum pennellii HOM05D007444 ORTHO05D009359 2.4e-42 176.8 183 47.5
MD09G1191700 Malus domestica HOM05D007444 ORTHO05D009359 5.3e-42 175.6 244 43.4
Psat5g292040 Pisum sativum HOM05D007444 ORTHO05D009359 5.3e-42 175.6 223 44.8
TPR.G6573 Trifolium pratense HOM05D007444 ORTHO05D009359 5.3e-42 175.6 187 48.1
CiPaw.02G139200 Carya illinoinensis HOM05D007444 ORTHO05D009359 9.0e-42 174.9 257 41.2
PGR119G0376 Punica granatum HOM05D007444 ORTHO05D009359 9.0e-42 174.9 175 53.7
QL05p011652 Quercus lobata HOM05D007444 ORTHO05D009359 9.0e-42 174.9 262 41.2
Phvul.005G158200 Phaseolus vulgaris HOM05D007444 ORTHO05D009359 7.6e-41 171.8 239 43.1
Cc04_g01830 Coffea canephora HOM05D007444 ORTHO05D009359 9.9e-41 171.4 287 40.1
Glyma.15G024900 Glycine max HOM05D007444 ORTHO05D009359 1.3e-40 171.0 234 42.3
PSO478G1587 Papaver somniferum HOM05D007444 ORTHO05D009359 1.3e-40 171.0 204 45.6
QL05p011272 Quercus lobata HOM05D007444 ORTHO05D009359 1.3e-40 171.0 252 40.5
PSO017G2704 Papaver somniferum HOM05D007444 ORTHO05D009359 1.7e-40 170.6 217 45.2
Cfa003571 Carpinus fangiana HOM05D007444 ORTHO05D009359 2.2e-40 170.2 180 47.2
Manes.11G025100 Manihot esculenta HOM05D007444 ORTHO05D009359 2.2e-40 170.2 244 41.0
Ciclev10026127m.g Citrus clementina HOM05D007444 ORTHO05D009359 2.9e-40 169.9 299 37.1
Haze_15975 Corylus avellana HOM05D007444 ORTHO05D009359 2.9e-40 169.9 298 36.9
GSVIVG01016873001 Vitis vinifera HOM05D007444 ORTHO05D009359 6.4e-40 168.7 236 41.9
Actinidia09035 Actinidia chinensis HOM05D007444 ORTHO05D009359 1.4e-39 167.5 257 40.5
Sed0011511 Sechium edule HOM05D007444 ORTHO05D009359 1.9e-39 167.2 291 43.6
EL10Ac7g16359 Beta vulgaris HOM05D007444 ORTHO05D009359 9.3e-39 164.9 187 43.9
CSS0030092 Camellia sinensis var. sinensis HOM05D007444 ORTHO05D009359 1.6e-38 164.1 259 40.2
Potri.001G196700 Populus trichocarpa HOM05D007444 ORTHO05D009359 7.9e-38 161.8 234 42.3
AUR62009843 Chenopodium quinoa HOM05D007444 ORTHO05D009359 1.3e-37 161.0 228 41.2
Peaxi162Scf00207g00133 Petunia axillaris HOM05D007444 ORTHO05D009359 2.3e-37 160.2 196 45.4
vmacro17027 Vaccinium macrocarpon HOM05D007444 ORTHO05D009359 2.3e-37 160.2 256 39.8
Lalb_Chr14g0372751 Lupinus albus HOM05D007444 ORTHO05D009359 5.1e-37 159.1 230 40.4
AUR62038156 Chenopodium quinoa HOM05D007444 ORTHO05D009359 8.7e-37 158.3 187 43.3
Lj3g0023369 Lotus japonicus HOM05D007444 ORTHO05D009359 1.1e-36 157.9 166 47.6
Oeu039953.1 Olea europaea HOM05D007444 ORTHO05D009359 2.5e-36 156.8 300 35.3
QL05p010974 Quercus lobata HOM05D007444 ORTHO05D009359 3.3e-36 156.4 194 44.8
Sabra01G0143200 Salix brachista HOM05D007444 ORTHO05D009359 7.4e-36 155.2 180 48.3
DCAR_022704 Daucus carota HOM05D007444 ORTHO05D009359 4.8e-35 152.5 256 39.1
TAR383G0129 Trochodendron aralioides HOM05D007444 ORTHO05D009359 4.8e-35 152.5 323 34.4
Aqoxy7G01186 Aquilegia oxysepala HOM05D007444 ORTHO05D009359 1.4e-34 151.0 268 37.3
arahy.Tifrunner.gnm1.ann1.ZV36U3 Arachis hypogaea HOM05D007444 ORTHO05D009359 1.4e-34 151.0 173 49.7
arahy.Tifrunner.gnm1.ann1.F397YD Arachis hypogaea HOM05D007444 ORTHO05D009359 1.8e-34 150.6 173 50.3
CAN.G825.32 Capsicum annuum HOM05D007444 ORTHO05D009359 5.3e-34 149.1 189 41.8
SGA_v2.0_scaffold68G22914 Striga asiatica HOM05D007444 ORTHO05D009359 4.5e-33 146.0 298 35.9
CANSAT56G0761 Cannabis sativa HOM05D007444 ORTHO05D009359 9.9e-33 144.8 188 43.6
Lsat_1_v5_gn_1_35640 Lactuca sativa HOM05D007444 ORTHO05D009359 8.4e-32 141.7 261 36.0
MSTRG.4771 Avicennia marina HOM05D007444 ORTHO05D009359 1.9e-31 140.6 293 34.1
MELO3C013088.2 Cucumis melo HOM05D007444 ORTHO05D009359 9.3e-31 138.3 179 44.7
CsaV3_3G043760 Cucumis sativus L. HOM05D007444 ORTHO05D009359 9.3e-31 138.3 284 35.9
Migut.D00964 Erythranthe guttata HOM05D007444 ORTHO05D009359 9.3e-31 138.3 302 35.1
MBI01_g20340_MAGBIO Magnolia biondii HOM05D007444 ORTHO05D009359 8.7e-29 131.7 254 35.4
HanXRQChr02g0031731 Helianthus annuus HOM05D007444 ORTHO05D009359 1.1e-28 131.3 289 39.8
Solyc06g062700.3 Solanum lycopersicum HOM05D007444 ORTHO05D009359 1.5e-28 131.0 111 54.1
SalBow7G2527 Salvia bowleyana HOM05D007444 ORTHO05D009359 4.3e-28 129.4 185 37.8
Cpa.g.sc25.50 Carica papaya HOM05D007444 ORTHO05D009359 4.8e-27 125.9 165 44.8
ClCG07G013830 Citrullus lanatus HOM05D007444 ORTHO05D009359 4.8e-27 125.9 306 33.7
Dinv37906 Davidia involucrata HOM05D007444 ORTHO05D009359 6.9e-26 122.1 163 44.8
CDE05G3416 Ceratophyllum demersum HOM05D007444 ORTHO05D009359 2.9e-24 116.7 269 33.5
Rhsim12G0206600 Rhododendron simsii HOM05D007444 ORTHO05D009359 3.8e-24 116.3 126 50.0
HPP92_005228 Vanilla planifolia HOM05D007444 ORTHO05D009359 4.2e-23 112.8 327 30.6
SEGI_13370 Sequoiadendron giganteum HOM05D007444 ORTHO05D009359 1.3e-19 101.3 228 32.0
Zm00001eb277400 Zea mays HOM05D007444 ORTHO05D009359 2.4e-18 97.1 261 29.5
ECA247G2926 Erigeron canadensis HOM05D000045 ORTHO05D000067 9.4e-15 85.1 94 43.6
Hma1.2p1_0496F.1_g165930 Hydrangea macrophylla HOM05D007444 ORTHO05D009359 1.4e-13 81.3 105 40.0
Pp3c14_13390 Physcomitrium patens HOM05D007444 ORTHO05D009359 7.4e-12 75.5 121 34.7
ATR0109G024 Amborella trichopoda HOM05D007444 ORTHO05D009359 1.3e-11 74.7 112 38.4
BcaC02g12249 Brassica carinata HOM05D007444 ORTHO05D009359 9.1e-10 68.6 38 76.3
Mapoly0028s0047 Marchantia polymorpha HOM05D007444 ORTHO05D009359 2.5e-07 60.5 150 30.0


User provided reference genes

Program Settings