Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g25426 Brassica carinata HOM05D007694 ORTHO05D017623 2.4e-107 392.1 190 100.0
C02p60690 Brassica napus HOM05D007694 ORTHO05D017623 6.2e-63 244.6 179 70.4
C01p17800 Brassica napus HOM05D007694 ORTHO05D017623 6.4e-60 234.6 180 68.9
BolC1t01714H Brassica oleracea HOM05D007694 ORTHO05D017623 6.4e-60 234.6 180 68.9
BolC4t23101H Brassica oleracea HOM05D007694 ORTHO05D017623 1.9e-59 233.0 179 67.6
C04p59470 Brassica napus HOM05D007694 ORTHO05D041000 2.3e-57 226.1 161 71.4
BolC4t27454H Brassica oleracea HOM05D007694 ORTHO05D041000 2.3e-57 226.1 161 71.4
C04p68250 Brassica napus HOM05D007694 ORTHO05D017623 3.9e-57 225.3 181 66.3
BraA03t11220Z Brassica rapa HOM05D007694 ORTHO05D017623 2.0e-53 213.0 179 64.8
BcaB02g07104 Brassica carinata HOM05D007694 ORTHO05D093325 8.4e-44 181.0 143 66.4
BcaC07g39619 Brassica carinata HOM05D007694 ORTHO05D090536 2.7e-42 176.0 179 57.0
C04p52480 Brassica napus HOM05D007694 ORTHO05D017623 1.8e-41 173.3 140 67.9
BcaC08g43501 Brassica carinata HOM05D007694 ORTHO05D032221 3.7e-39 165.6 136 64.7
BcaC09g51023 Brassica carinata HOM05D000022 ORTHO05D000071 1.8e-38 163.3 105 75.2
BcaB04g18319 Brassica carinata HOM05D007694 ORTHO05D091879 4.0e-38 162.2 117 66.7
BcaC04g22991 Brassica carinata HOM05D007694 ORTHO05D094549 1.1e-35 154.1 102 73.5
BcaB08g35388 Brassica carinata HOM05D007694 ORTHO05D003268 3.5e-34 149.1 110 66.4
BraA03t14786Z Brassica rapa HOM05D007694 ORTHO05D017623 3.0e-33 146.0 129 62.0
BolC6t35963H Brassica oleracea HOM05D007694 ORTHO05D032221 5.1e-33 145.2 118 67.8
C06p08850 Brassica napus HOM05D007694 ORTHO05D032221 1.9e-32 143.3 118 66.9
BcaC02g07899 Brassica carinata HOM05D007694 ORTHO05D032824 1.6e-31 140.2 169 49.7
BolC1t04613H Brassica oleracea HOM05D007694 ORTHO05D032021 2.1e-31 139.8 169 48.5
C03p03780 Brassica napus HOM05D007694 ORTHO05D032021 4.8e-31 138.7 169 47.9
C04p62200 Brassica napus HOM05D007694 ORTHO05D032824 4.8e-31 138.7 169 49.1
BolC4t27699H Brassica oleracea HOM05D007694 ORTHO05D032824 4.8e-31 138.7 169 49.1
BolC6t38748H Brassica oleracea HOM05D007694 ORTHO05D040580 1.8e-30 136.7 169 48.5
C02p22430 Brassica napus HOM05D007694 ORTHO05D023849 2.4e-30 136.3 159 49.7
C09p47680 Brassica napus HOM05D007694 ORTHO05D023849 2.4e-30 136.3 159 49.7
BcaC02g07312 Brassica carinata HOM05D007694 ORTHO05D019980 4.1e-30 135.6 96 70.8
C06p36270 Brassica napus HOM05D007694 ORTHO05D040580 9.0e-30 134.4 169 47.9
BolC7t45648H Brassica oleracea HOM05D007694 ORTHO05D018628 2.0e-29 133.3 169 50.9
BcaB03g13247 Brassica carinata HOM05D007694 ORTHO05D007622 4.5e-29 132.1 177 44.1
C05p07860 Brassica napus HOM05D007694 ORTHO05D023849 7.6e-29 131.3 159 49.7
C02p29800 Brassica napus HOM05D007694 ORTHO05D097335 1.4e-27 127.1 159 46.5
BcaC07g36849 Brassica carinata HOM05D007694 ORTHO05D019980 3.2e-27 125.9 91 69.2
BolC3t15113H Brassica oleracea HOM05D007694 ORTHO05D019925 3.2e-27 125.9 169 45.0
C03p26050 Brassica napus HOM05D007694 ORTHO05D103481 5.5e-27 125.2 169 47.3
C03p27330 Brassica napus HOM05D007694 ORTHO05D019925 1.6e-26 123.6 169 44.4
BcaC06g34704 Brassica carinata HOM05D007694 ORTHO05D039975 3.5e-26 122.5 169 47.3
C03p37800 Brassica napus HOM05D007694 ORTHO05D018628 4.6e-26 122.1 169 46.7
A06p28320 Brassica napus HOM05D007694 ORTHO05D019925 6.1e-26 121.7 168 44.6
BcaC06g33706 Brassica carinata HOM05D007694 ORTHO05D019980 1.3e-25 120.6 87 67.8
BraA06t25774Z Brassica rapa HOM05D007694 ORTHO05D019925 2.3e-25 119.8 168 44.0
C09p74970 Brassica napus HOM05D007694 ORTHO05D018628 3.0e-25 119.4 169 46.7
C07p15690 Brassica napus HOM05D007694 ORTHO05D039975 1.1e-24 117.5 169 46.7
BcaB04g17819 Brassica carinata HOM05D000471 ORTHO05D000199 4.3e-24 115.5 140 50.0
BcaNung06212 Brassica carinata HOM05D007694 ORTHO05D032021 2.8e-23 112.8 122 52.5
BcaC05g26461 Brassica carinata HOM05D007694 ORTHO05D090717 4.8e-23 112.1 71 76.1
C06p41010 Brassica napus HOM05D007694 ORTHO05D019925 2.4e-22 109.8 169 42.0
BcaB08g34287 Brassica carinata HOM05D007694 ORTHO05D018628 1.0e-20 104.4 140 47.9
BcaC08g46337 Brassica carinata HOM05D007694 ORTHO05D019925 2.1e-18 96.7 103 49.5
BcaB03g14933 Brassica carinata HOM05D007694 ORTHO05D095207 3.9e-17 92.4 61 67.2
BcaC08g45840 Brassica carinata HOM05D007694 ORTHO05D094686 5.1e-17 92.0 88 54.5
BcaC03g17842 Brassica carinata HOM05D010239 ORTHO05D021857 1.5e-16 90.5 101 49.5
C02p58810 Brassica napus HOM05D010239 ORTHO05D021857 1.5e-16 90.5 101 49.5
BolC7t41525H Brassica oleracea HOM05D006896 ORTHO05D007622 1.5e-16 90.5 100 49.0
C05p39780 Brassica napus HOM05D007694 ORTHO05D018628 5.7e-16 88.6 130 45.4
A09p11800 Brassica napus HOM05D010239 ORTHO05D021857 7.4e-16 88.2 146 39.0
A08p01330 Brassica napus HOM05D010239 ORTHO05D021857 1.3e-15 87.4 146 39.0
BolC5t32721H Brassica oleracea HOM05D007694 ORTHO05D018628 1.3e-15 87.4 128 45.3
C09p20580 Brassica napus HOM05D007694 ORTHO05D098549 2.8e-15 86.3 107 45.8
C03p00010 Brassica napus HOM05D010239 ORTHO05D024417 6.3e-15 85.1 100 46.0
BolC5t29133H Brassica oleracea HOM05D010239 ORTHO05D024417 6.3e-15 85.1 100 46.0
BcaC01g04928 Brassica carinata HOM05D010239 ORTHO05D024417 9.1e-14 81.3 99 44.4
BcaC03g12959 Brassica carinata HOM05D010239 ORTHO05D090479 9.1e-14 81.3 100 45.0
C02p01760 Brassica napus HOM05D010239 ORTHO05D024417 9.1e-14 81.3 100 45.0
C03p32000 Brassica napus HOM05D010239 ORTHO05D024417 9.1e-14 81.3 99 44.4
BolC3t15543H Brassica oleracea HOM05D010239 ORTHO05D104682 2.0e-13 80.1 99 43.4
BcaC05g29803 Brassica carinata HOM05D007694 ORTHO05D019969 2.6e-13 79.7 72 62.5
C03p14610 Brassica napus HOM05D007694 ORTHO05D019969 2.2e-12 76.6 65 63.1
BcaC03g18291 Brassica carinata HOM05D010239 ORTHO05D090330 3.8e-12 75.9 82 50.0
BolC2t12312H Brassica oleracea HOM05D010239 ORTHO05D021857 3.8e-12 75.9 82 50.0
C03p84280 Brassica napus HOM05D007694 ORTHO05D019969 1.4e-11 73.9 65 61.5
C07p27460 Brassica napus HOM05D007694 ORTHO05D019969 1.4e-11 73.9 65 61.5
BolC7t43276H Brassica oleracea HOM05D007694 ORTHO05D019969 1.4e-11 73.9 65 61.5
C09p67420 Brassica napus HOM05D010239 ORTHO05D032921 1.9e-11 73.6 79 48.1
BolC9t59504H Brassica oleracea HOM05D010239 ORTHO05D032921 1.9e-11 73.6 79 48.1
A01p18710 Brassica napus HOM05D007694 ORTHO05D018628 7.2e-11 71.6 104 48.1
C03p13860 Brassica napus HOM05D007694 ORTHO05D019969 9.4e-11 71.2 65 60.0
BraA08t32183Z Brassica rapa HOM05D010239 ORTHO05D021857 1.2e-10 70.9 127 37.0
BcaC01g03734 Brassica carinata HOM05D009681 ORTHO05D013235 6.1e-10 68.6 152 35.5
C01p52730 Brassica napus HOM05D009681 ORTHO05D013235 1.8e-09 67.0 152 34.9
BcaB03g15520 Brassica carinata HOM05D009681 ORTHO05D013235 2.3e-09 66.6 149 36.9
C03p14360 Brassica napus HOM05D009681 ORTHO05D013235 3.9e-09 65.9 152 34.2
BraA09t39372Z Brassica rapa HOM05D007694 ORTHO05D018628 8.8e-09 64.7 100 43.0
BcaC02g10860 Brassica carinata HOM05D009681 ORTHO05D013235 2.6e-08 63.2 152 34.2
BcaC04g22727 Brassica carinata HOM05D009681 ORTHO05D013235 2.6e-08 63.2 152 33.6
C03p44900 Brassica napus HOM05D009681 ORTHO05D013235 5.7e-08 62.0 152 33.6
BraA07t28487Z Brassica rapa HOM05D006896 ORTHO05D007622 9.7e-08 61.2 80 47.5
BcaB01g05936 Brassica carinata HOM05D009681 ORTHO05D013235 1.8e-06 57.0 130 33.8
A04p22240 Brassica napus HOM05D009832 ORTHO05D027185 2.4e-06 56.6 53 58.5
BraA04t17776Z Brassica rapa HOM05D009832 ORTHO05D027185 2.4e-06 56.6 53 58.5
BcaB05g23971 Brassica carinata HOM05D007694 ORTHO05D092126 3.1e-06 56.2 90 41.1
A09p45490 Brassica napus HOM05D009681 ORTHO05D013235 3.1e-06 56.2 149 32.9
BcaC01g04122 Brassica carinata HOM05D009681 ORTHO05D013235 5.3e-06 55.5 69 49.3
C09p15890 Brassica napus HOM05D009681 ORTHO05D013235 7.0e-06 55.1 96 37.5
BraA09t40010Z Brassica rapa HOM05D009681 ORTHO05D013235 9.1e-06 54.7 149 32.2


User provided reference genes

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