Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g25331 Brassica carinata HOM05D006614 ORTHO05D008217 0.0e+00 1142.9 613 100.0
Sp3g13110 Schrenkiella parvula HOM05D006614 ORTHO05D008217 1.0e-308 1062.8 613 88.7
BolC5t33914H Brassica oleracea HOM05D006614 ORTHO05D008217 6.2e-306 1053.5 617 90.0
C05p52250 Brassica napus HOM05D006614 ORTHO05D008217 1.2e-304 1049.3 615 87.8
A05p34510 Brassica napus HOM05D006614 ORTHO05D008217 2.9e-303 1044.6 615 87.5
BraA05t22271Z Brassica rapa HOM05D006614 ORTHO05D008217 2.9e-303 1044.6 615 87.5
Thhalv10022322m.g Eutrema salsugineum HOM05D006614 ORTHO05D008217 3.2e-294 1014.6 608 87.3
AT3G14900 Arabidopsis thaliana HOM05D006614 ORTHO05D008217 1.9e-291 1005.4 618 86.7
Carub.0003s1456 Capsella rubella HOM05D006614 ORTHO05D008217 3.1e-289 998.0 615 85.7
AL3G27220 Arabidopsis lyrata HOM05D006614 ORTHO05D008217 1.7e-287 992.3 615 86.5
CARHR089840 Cardamine hirsuta HOM05D006614 ORTHO05D008217 5.8e-280 967.2 626 83.1
BcaB06g29517 Brassica carinata HOM05D006614 ORTHO05D008217 1.0e-276 956.4 615 81.6
Aa31LG8G2110 Aethionema arabicum HOM05D006614 ORTHO05D008217 1.4e-262 909.4 629 78.5
THA.LOC104822565 Tarenaya hassleriana HOM05D006614 ORTHO05D008217 3.3e-251 871.7 634 72.6
Gohir.D07G233600 Gossypium hirsutum HOM05D006614 ORTHO05D008217 2.1e-200 703.0 615 63.7
Cpa.g.sc77.8 Carica papaya HOM05D006614 ORTHO05D008217 4.6e-200 701.8 613 61.2
COL.COLO4_17543 Corchorus olitorius HOM05D006614 ORTHO05D008217 2.3e-199 699.5 617 63.5
Duzib213G0629 Durio zibethinus HOM05D006614 ORTHO05D008217 1.1e-198 697.2 612 62.9
Thecc.07G117000 Theobroma cacao HOM05D006614 ORTHO05D008217 2.5e-198 696.0 615 64.7
Gorai.001G269000 Gossypium raimondii HOM05D006614 ORTHO05D008217 5.6e-198 694.9 614 63.0
PGR142G0467 Punica granatum HOM05D006614 ORTHO05D008217 1.2e-197 693.7 613 62.5
Gohir.A07G226400 Gossypium hirsutum HOM05D006614 ORTHO05D008217 2.8e-197 692.6 614 62.9
Manes.15G094800 Manihot esculenta HOM05D006614 ORTHO05D008217 1.7e-194 683.3 623 58.9
DCAR_021025 Daucus carota HOM05D006614 ORTHO05D008217 1.2e-192 677.2 630 60.0
RcHm_v2.0_Chr5g0030921 Rosa chinensis HOM05D006614 ORTHO05D008217 1.0e-191 674.1 631 59.9
FvH4_3g18290 Fragaria vesca HOM05D006614 ORTHO05D008217 1.7e-191 673.3 622 58.2
CSS0027020 Camellia sinensis var. sinensis HOM05D006614 ORTHO05D008217 5.1e-191 671.8 620 58.9
FAN16G2994 Fragaria x ananassa HOM05D006614 ORTHO05D008217 5.1e-191 671.8 620 57.7
FAN11G1715 Fragaria x ananassa HOM05D006614 ORTHO05D008217 9.6e-190 667.5 625 57.3
Sc16g0007600 Simmondsia chinensis HOM05D006614 ORTHO05D008217 4.7e-189 665.2 625 59.7
Glyma.14G066300 Glycine max HOM05D006614 ORTHO05D008217 3.1e-188 662.5 617 59.3
TAR375G0652 Trochodendron aralioides HOM05D006614 ORTHO05D008217 5.2e-188 661.8 644 56.5
GSVIVG01014198001 Vitis vinifera HOM05D006614 ORTHO05D008217 3.4e-187 659.1 613 57.1
Nitab4.5_0006953g0010 Nicotiana tabacum HOM05D006614 ORTHO05D008217 5.8e-187 658.3 618 56.6
Psat2g179000 Pisum sativum HOM05D006614 ORTHO05D008217 2.2e-186 656.4 634 57.1
Medtr5g080700 Medicago truncatula HOM05D006614 ORTHO05D008217 2.9e-186 656.0 620 57.7
TPR.G25839 Trifolium pratense HOM05D006614 ORTHO05D008217 3.8e-186 655.6 624 58.0
Prupe.4G164700 Prunus persica HOM05D006614 ORTHO05D008217 6.4e-186 654.8 629 62.0
Migut.M00728 Erythranthe guttata HOM05D006614 ORTHO05D008217 1.1e-185 654.1 613 57.7
MD03G1243600 Malus domestica HOM05D006614 ORTHO05D008217 1.9e-185 653.3 637 58.2
Peaxi162Scf00111g01423 Petunia axillaris HOM05D006614 ORTHO05D008217 1.9e-185 653.3 628 55.6
LjContig00141g0022614 Lotus japonicus HOM05D006614 ORTHO05D008217 3.2e-185 652.5 616 59.6
TWI38G0322 Tripterygium wilfordii HOM05D006614 ORTHO05D008217 9.3e-185 651.0 618 61.5
HanXRQChr15g0476201 Helianthus annuus HOM05D006614 ORTHO05D008217 2.7e-184 649.4 614 60.3
Ca_05900_v3 Cicer arietinum L. HOM05D006614 ORTHO05D008217 3.5e-184 649.0 631 56.6
Phvul.008G231100 Phaseolus vulgaris HOM05D006614 ORTHO05D008217 4.6e-184 648.7 621 58.5
Potri.001G390600 Populus trichocarpa HOM05D006614 ORTHO05D008217 1.0e-183 647.5 624 58.3
Actinidia12578 Actinidia chinensis HOM05D006614 ORTHO05D008217 3.9e-183 645.6 611 55.6
Ah.09g230960 Amaranthus hybridus HOM05D006614 ORTHO05D008217 3.9e-183 645.6 648 57.4
Nitab4.5_0003565g0010 Nicotiana tabacum HOM05D006614 ORTHO05D008217 3.9e-183 645.6 631 54.7
Lj1P829T27 Lonicera japonica HOM05D006614 ORTHO05D008217 5.1e-183 645.2 567 64.7
ClCG11G017450 Citrullus lanatus HOM05D006614 ORTHO05D008217 4.3e-182 642.1 614 59.9
Sed0001562 Sechium edule HOM05D006614 ORTHO05D008217 4.3e-182 642.1 615 59.0
CANSAT35G1108 Cannabis sativa HOM05D006614 ORTHO05D008217 9.6e-182 641.0 630 58.3
CiPaw.11G160300 Carya illinoinensis HOM05D006614 ORTHO05D008217 1.6e-181 640.2 640 56.6
Atru.chr2.2145 Acer truncatum HOM05D006614 ORTHO05D008217 6.2e-181 638.3 616 55.7
VMungo0647G0674 Vigna mungo HOM05D006614 ORTHO05D008217 6.2e-181 638.3 561 61.1
Rhsim06G0208100 Rhododendron simsii HOM05D006614 ORTHO05D008217 1.1e-180 637.5 619 57.8
Dinv14994 Davidia involucrata HOM05D006614 ORTHO05D008217 2.4e-180 636.3 615 55.3
Hma1.2p1_0290F.1_g114830 Hydrangea macrophylla HOM05D006614 ORTHO05D008217 2.4e-180 636.3 612 57.8
Thecc.07G116400 Theobroma cacao HOM05D006614 ORTHO05D008217 4.0e-180 635.6 525 66.7
PGSC0003DMG400046940 Solanum tuberosum HOM05D006614 ORTHO05D008217 1.2e-179 634.0 617 55.4
EL10Ac8g18445 Beta vulgaris HOM05D006614 ORTHO05D008217 1.7e-178 630.2 632 57.9
CsaV3_4G033120 Cucumis sativus L. HOM05D006614 ORTHO05D008217 2.2e-178 629.8 550 61.1
Cc05_g11080 Coffea canephora HOM05D006614 ORTHO05D008217 2.9e-178 629.4 618 55.0
Solyc07g062440.1 Solanum lycopersicum HOM05D006614 ORTHO05D008217 2.9e-178 629.4 628 55.4
Sopen07g030680 Solanum pennellii HOM05D006614 ORTHO05D008217 2.9e-178 629.4 625 55.5
Lalb_Chr17g0346371 Lupinus albus HOM05D006614 ORTHO05D008217 1.9e-177 626.7 558 58.2
vmacro23466 Vaccinium macrocarpon HOM05D006614 ORTHO05D008217 7.1e-177 624.8 619 54.3
arahy.Tifrunner.gnm1.ann1.087IU6 Arachis hypogaea HOM05D006614 ORTHO05D008217 9.3e-177 624.4 625 57.8
MELO3C025640.2 Cucumis melo HOM05D006614 ORTHO05D008217 1.6e-176 623.6 609 57.3
arahy.Tifrunner.gnm1.ann1.UH0U35 Arachis hypogaea HOM05D006614 ORTHO05D008217 1.3e-175 620.5 625 57.6
ECA240G1555 Erigeron canadensis HOM05D006614 ORTHO05D008217 3.0e-175 619.4 628 58.8
MSTRG.6677 Avicennia marina HOM05D006614 ORTHO05D008217 5.1e-175 618.6 620 54.4
Haze_09323 Corylus avellana HOM05D006614 ORTHO05D008217 1.5e-174 617.1 556 62.9
QL12p002313 Quercus lobata HOM05D006614 ORTHO05D008217 2.8e-173 612.8 548 63.3
CAN.G375.15 Capsicum annuum HOM05D006614 ORTHO05D008217 8.1e-173 611.3 615 54.5
Cfa019566 Carpinus fangiana HOM05D006614 ORTHO05D008217 1.4e-172 610.5 556 61.2
Oeu061358.1 Olea europaea HOM05D006614 ORTHO05D008217 1.4e-172 610.5 608 55.4
SGA_v2.0_scaffold34G13782 Striga asiatica HOM05D006614 ORTHO05D008217 2.4e-172 609.8 619 55.6
SalBow5G0223 Salvia bowleyana HOM05D006614 ORTHO05D008217 9.0e-172 607.8 544 57.4
PSO421G0295 Papaver somniferum HOM05D006614 ORTHO05D008217 1.9e-169 600.1 632 52.2
CDE12G0873 Ceratophyllum demersum HOM05D006614 ORTHO05D008217 2.4e-169 599.7 598 55.2
PSO063G1163 Papaver somniferum HOM05D006614 ORTHO05D008217 2.4e-169 599.7 624 53.2
unitig_747.g21586 Utricularia gibba HOM05D006614 ORTHO05D008217 1.9e-166 590.1 605 53.1
AUR62021467 Chenopodium quinoa HOM05D006614 ORTHO05D008217 4.3e-166 589.0 640 51.6
Aqoxy1G00012 Aquilegia oxysepala HOM05D006614 ORTHO05D008217 1.6e-165 587.0 551 60.8
AUR62010952 Chenopodium quinoa HOM05D006614 ORTHO05D008217 1.1e-156 557.8 640 49.1
MBI12_g10753_MAGBIO Magnolia biondii HOM05D006614 ORTHO05D008217 2.0e-155 553.5 482 58.1
HPP92_015867 Vanilla planifolia HOM05D006614 ORTHO05D008217 3.8e-154 549.3 584 50.2
FAN25G0567 Fragaria x ananassa HOM05D006614 ORTHO05D008217 2.1e-152 543.5 623 51.4
ATR0810G004 Amborella trichopoda HOM05D006614 ORTHO05D008217 1.0e-143 514.6 558 52.3
Hma1.2p1_0290F.1_g114840 Hydrangea macrophylla HOM05D006614 ORTHO05D008217 1.8e-143 513.8 447 57.5
vmacro11940 Vaccinium macrocarpon HOM05D006614 ORTHO05D008217 5.1e-143 512.3 551 50.5
Zm00001eb078480 Zea mays HOM05D006614 ORTHO05D008217 1.5e-139 500.7 540 49.4
Psat0s3066g0080 Pisum sativum HOM05D006614 ORTHO05D008217 1.4e-137 494.2 443 57.8
Os04g0497900 Oryza sativa ssp. japonica HOM05D006614 ORTHO05D008217 3.6e-136 489.6 550 50.2
Eucgr.K01881 Eucalyptus grandis HOM05D006614 ORTHO05D008217 2.0e-134 483.8 639 45.5
Sabra16G0256000 Salix brachista HOM05D006614 ORTHO05D008217 3.7e-133 479.6 373 60.6
Aqoxy3G00116 Aquilegia oxysepala HOM05D006614 ORTHO05D008217 1.7e-114 417.5 420 61.4
Ciclev10023881m.g Citrus clementina HOM05D006614 ORTHO05D008217 1.4e-95 354.8 347 56.5
Glyma.02G250300 Glycine max HOM05D006614 ORTHO05D008217 5.2e-95 352.8 342 58.5
SEGI_22211 Sequoiadendron giganteum HOM05D006614 ORTHO05D008217 1.1e-79 302.0 533 34.7
AagrBONN_evm.TU.Sc2ySwM_228.5094 Anthoceros agrestis HOM05D006614 ORTHO05D008217 5.3e-47 193.4 466 35.2
Pp3c16_3160 Physcomitrium patens HOM05D006614 ORTHO05D008217 3.8e-45 187.2 552 34.1
SMO356G0609 Selaginella moellendorffii HOM05D006614 ORTHO05D008217 9.3e-44 182.6 248 37.9
SMO356G0760 Selaginella moellendorffii HOM05D006614 ORTHO05D008217 9.3e-44 182.6 270 37.0
Mapoly0097s0086 Marchantia polymorpha HOM05D006614 ORTHO05D008217 1.6e-40 171.8 303 33.3
Cfa009322 Carpinus fangiana HOM05D006614 ORTHO05D008217 3.7e-32 144.1 130 53.8
MD11G1263800 Malus domestica HOM05D006614 ORTHO05D008217 7.9e-27 126.3 91 64.8
Dinv02793 Davidia involucrata HOM05D006614 ORTHO05D008217 1.3e-24 119.0 81 67.9
Psat0s3066g0040 Pisum sativum HOM05D006614 ORTHO05D008217 3.7e-24 117.5 76 72.4
Cfa001947 Carpinus fangiana HOM05D006614 ORTHO05D008217 3.1e-23 114.4 89 64.0
HPP92_015860 Vanilla planifolia HOM05D006614 ORTHO05D008217 1.9e-20 105.1 68 63.2
FAN21G3229 Fragaria x ananassa HOM05D006614 ORTHO05D008217 7.2e-20 103.2 69 69.6
CBR_g47994 Chara braunii HOM05D006614 ORTHO05D008217 4.7e-19 100.5 376 26.1
Aqoxy3G00115 Aquilegia oxysepala HOM05D006614 ORTHO05D008217 2.0e-17 95.1 106 56.6


User provided reference genes

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