Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g25313 Brassica carinata HOM05D000003 ORTHO05D000006 1.1e-65 253.1 119 100.0
BcaC05g29431 Brassica carinata HOM05D000003 ORTHO05D000006 4.3e-38 161.4 101 69.3
BcaC07g41544 Brassica carinata HOM05D000003 ORTHO05D000006 2.4e-36 155.6 106 65.1
BcaB03g15672 Brassica carinata HOM05D000003 ORTHO05D000006 3.4e-35 151.8 116 58.6
BcaB05g24571 Brassica carinata HOM05D000003 ORTHO05D000006 3.4e-35 151.8 104 63.5
BcaB06g28004 Brassica carinata HOM05D000003 ORTHO05D000006 2.2e-34 149.1 104 63.5
BcaC03g17398 Brassica carinata HOM05D000003 ORTHO05D000006 3.8e-34 148.3 104 59.6
BcaC08g46963 Brassica carinata HOM05D000003 ORTHO05D000006 3.8e-34 148.3 106 61.3
BcaB04g18669 Brassica carinata HOM05D000003 ORTHO05D000006 1.1e-33 146.7 100 63.0
BcaC01g00332 Brassica carinata HOM05D000003 ORTHO05D000006 1.1e-33 146.7 104 62.5
BolC7t45747H Brassica oleracea HOM05D000003 ORTHO05D000006 2.5e-33 145.6 104 57.7
BcaC09g48985 Brassica carinata HOM05D000003 ORTHO05D000006 5.5e-33 144.4 101 61.4
BcaB07g32061 Brassica carinata HOM05D000003 ORTHO05D000006 9.3e-33 143.7 94 64.9
BcaB08g34387 Brassica carinata HOM05D000003 ORTHO05D000006 1.2e-32 143.3 94 66.0
BcaC02g09909 Brassica carinata HOM05D000003 ORTHO05D000006 1.2e-32 143.3 92 68.5
BcaB01g04306 Brassica carinata HOM05D000003 ORTHO05D000006 1.6e-32 142.9 98 62.2
BolC8t47297H Brassica oleracea HOM05D013597 ORTHO05D000006 3.5e-32 141.7 87 73.6
BolC1t01720H Brassica oleracea HOM05D000003 ORTHO05D000006 3.0e-31 138.7 110 55.5
BcaC08g42936 Brassica carinata HOM05D000496 ORTHO05D000411 3.9e-31 138.3 101 57.4
BcaB05g25282 Brassica carinata HOM05D000003 ORTHO05D000006 1.9e-30 136.0 94 62.8
BcaB05g25143 Brassica carinata HOM05D000003 ORTHO05D000006 6.2e-29 131.0 98 57.1
BcaC07g38676 Brassica carinata HOM05D000496 ORTHO05D000411 3.2e-25 118.6 76 67.1
BcaC03g15116 Brassica carinata HOM05D000496 ORTHO05D000411 5.5e-25 117.9 101 48.5
BcaB02g09878 Brassica carinata HOM05D000496 ORTHO05D000411 4.6e-24 114.8 104 47.1
BcaC05g27908 Brassica carinata HOM05D000003 ORTHO05D000006 1.3e-23 113.2 104 48.1
BcaC06g36164 Brassica carinata HOM05D000496 ORTHO05D000411 2.3e-23 112.5 104 48.1
BcaB08g34848 Brassica carinata HOM05D000496 ORTHO05D000411 3.9e-23 111.7 98 49.0
BcaB02g08512 Brassica carinata HOM05D000496 ORTHO05D000411 1.5e-22 109.8 104 46.2
BcaC07g36967 Brassica carinata HOM05D000496 ORTHO05D000411 3.3e-22 108.6 104 47.1
BcaB07g33425 Brassica carinata HOM05D000496 ORTHO05D000411 1.3e-21 106.7 104 46.2
BcaC09g47652 Brassica carinata HOM05D000003 ORTHO05D000006 1.6e-21 106.3 101 48.5
BcaB03g14160 Brassica carinata HOM05D000496 ORTHO05D000411 2.2e-21 105.9 104 45.2
BcaC06g34152 Brassica carinata HOM05D000496 ORTHO05D000411 2.8e-21 105.5 104 43.3
BcaC08g46847 Brassica carinata HOM05D000496 ORTHO05D000411 6.3e-21 104.4 101 44.6
BcaC03g15337 Brassica carinata HOM05D000003 ORTHO05D000006 1.8e-20 102.8 104 41.3
Carub.0001s0181 Capsella rubella HOM05D000003 ORTHO05D000006 5.3e-20 101.3 89 48.3
BcaC05g28546 Brassica carinata HOM05D000003 ORTHO05D000006 3.4e-19 98.6 104 41.3
BcaC07g40131 Brassica carinata HOM05D014076 ORTHO05D000006 3.4e-19 98.6 104 42.3
BcaC09g48310 Brassica carinata HOM05D000003 ORTHO05D000006 7.7e-19 97.4 104 43.3
BcaB03g15248 Brassica carinata HOM05D000003 ORTHO05D000006 2.2e-18 95.9 101 40.6
BcaC05g25993 Brassica carinata HOM05D000003 ORTHO05D000006 2.1e-16 89.4 96 41.7
BcaC02g12210 Brassica carinata HOM05D000003 ORTHO05D000925 7.9e-16 87.4 102 38.2
BcaC04g21213 Brassica carinata HOM05D000496 ORTHO05D000411 1.0e-15 87.0 104 39.4
BcaC06g34875 Brassica carinata HOM05D000003 ORTHO05D000006 2.3e-15 85.9 101 36.6
BcaC02g10031 Brassica carinata HOM05D000003 ORTHO05D000006 5.1e-15 84.7 104 37.5
BcaC04g19171 Brassica carinata HOM05D000003 ORTHO05D000006 8.8e-15 84.0 85 41.2
BcaC05g26162 Brassica carinata HOM05D000003 ORTHO05D000006 3.3e-14 82.0 101 34.7
BcaB05g21463 Brassica carinata HOM05D000003 ORTHO05D000006 4.3e-14 81.6 104 36.5
BcaC02g11021 Brassica carinata HOM05D000003 ORTHO05D000925 5.7e-14 81.3 64 54.7
BcaC09g49165 Brassica carinata HOM05D000032 ORTHO05D000925 5.7e-14 81.3 82 42.7
BcaB03g16558 Brassica carinata HOM05D000003 ORTHO05D000006 7.4e-14 80.9 63 52.4
BcaC08g43243 Brassica carinata HOM05D000003 ORTHO05D013247 2.8e-13 79.0 72 44.4
BcaB04g17684 Brassica carinata HOM05D000003 ORTHO05D021670 8.2e-13 77.4 99 37.4
BcaC06g36207 Brassica carinata HOM05D000003 ORTHO05D015459 3.1e-12 75.5 100 36.0
BcaC07g37007 Brassica carinata HOM05D000496 ORTHO05D021670 3.1e-12 75.5 104 34.6
BcaC06g33595 Brassica carinata HOM05D000003 ORTHO05D000006 1.2e-11 73.6 83 37.3
BcaC05g27993 Brassica carinata HOM05D000003 ORTHO05D000006 2.6e-11 72.4 96 34.4
BraA07t30151Z Brassica rapa HOM05D000003 ORTHO05D000006 2.6e-11 72.4 63 44.4
BcaB01g06142 Brassica carinata HOM05D000496 ORTHO05D000411 4.5e-11 71.6 85 41.2
BcaC02g09343 Brassica carinata HOM05D000003 ORTHO05D021670 4.5e-11 71.6 81 38.3
BraA01t01837Z Brassica rapa HOM05D014076 ORTHO05D021903 4.5e-11 71.6 73 43.8
BcaC08g43574 Brassica carinata HOM05D000003 ORTHO05D000006 5.9e-11 71.2 79 41.8
BcaNung06703 Brassica carinata HOM05D000003 ORTHO05D000006 1.3e-10 70.1 87 37.9
BcaB03g13651 Brassica carinata HOM05D000003 ORTHO05D021670 2.2e-10 69.3 78 37.2
Carub.0005s0877 Capsella rubella HOM05D000003 ORTHO05D000006 5.0e-10 68.2 91 36.3
Carub.0002s0756 Capsella rubella HOM05D000003 ORTHO05D000006 8.5e-10 67.4 91 34.1
Aa31LG10G2340 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.1e-09 67.0 114 28.9
Aa31LG9G4050 Aethionema arabicum HOM05D000003 ORTHO05D009772 2.5e-09 65.9 112 29.5
Aa31sc52G80 Aethionema arabicum HOM05D000003 ORTHO05D000004 3.2e-09 65.5 104 26.9
Aa31LG6G15220 Aethionema arabicum HOM05D000003 ORTHO05D000004 7.2e-09 64.3 111 29.7
Aa31LG11G6720 Aethionema arabicum HOM05D000003 ORTHO05D000006 1.6e-08 63.2 114 28.1
Aa31LG3G4270 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.7e-08 62.4 112 26.8
BolC4t28605H Brassica oleracea HOM05D000003 ORTHO05D000006 3.6e-08 62.0 50 48.0
Aa31LG2G15580 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.7e-08 61.6 112 26.8
Aa31LG7G3330 Aethionema arabicum HOM05D000003 ORTHO05D000004 7.9e-08 60.8 114 26.3
BcaB05g22432 Brassica carinata HOM05D000003 ORTHO05D000004 1.0e-07 60.5 104 31.7
BolC7t41849H Brassica oleracea HOM05D000003 ORTHO05D000006 1.4e-07 60.1 91 29.7
Aa31sc551G10 Aethionema arabicum HOM05D000003 ORTHO05D000006 2.3e-07 59.3 112 29.5
Atru.chr5.1803 Acer truncatum HOM05D000003 ORTHO05D000006 3.0e-07 58.9 112 25.9
BcaB05g24840 Brassica carinata HOM05D000003 ORTHO05D001498 3.9e-07 58.5 95 31.6
BcaC01g02592 Brassica carinata HOM05D000003 ORTHO05D000006 3.9e-07 58.5 89 29.2
Aa31sc688G40 Aethionema arabicum HOM05D000003 ORTHO05D000004 6.7e-07 57.8 106 26.4
Aa31LG3G5460 Aethionema arabicum HOM05D000003 ORTHO05D000004 8.8e-07 57.4 106 26.4
Aa31sc210G10 Aethionema arabicum HOM05D000003 ORTHO05D000004 8.8e-07 57.4 114 25.4
BcaC03g16617 Brassica carinata HOM05D000003 ORTHO05D000411 8.8e-07 57.4 91 33.0
Atru.chr7.1503 Acer truncatum HOM05D000003 ORTHO05D000006 1.1e-06 57.0 112 27.7
Aa31LG2G16890 Aethionema arabicum HOM05D000003 ORTHO05D009772 1.1e-06 57.0 98 30.6
Aa31sc256G10 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.1e-06 57.0 105 27.6
BcaC03g17182 Brassica carinata HOM05D000003 ORTHO05D000006 1.1e-06 57.0 127 26.0
Atru.chr11.154 Acer truncatum HOM05D000003 ORTHO05D000006 1.5e-06 56.6 106 28.3
BcaC01g01482 Brassica carinata HOM05D009238 ORTHO05D021611 1.5e-06 56.6 48 45.8
BraA02t07552Z Brassica rapa HOM05D000003 ORTHO05D011507 1.5e-06 56.6 101 28.7
Aa31LG2G16390 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.6e-06 55.8 112 25.9
Aa31sc1394G10 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.6e-06 55.8 112 25.9
BolC6t38194H Brassica oleracea HOM05D000003 ORTHO05D000006 2.6e-06 55.8 104 27.9
Aa31LG1G5430 Aethionema arabicum HOM05D000003 ORTHO05D009772 3.3e-06 55.5 117 27.4
BcaB06g27718 Brassica carinata HOM05D000003 ORTHO05D001498 3.3e-06 55.5 105 29.5
BcaB04g18843 Brassica carinata HOM05D000003 ORTHO05D001498 4.4e-06 55.1 105 29.5
BcaC07g37731 Brassica carinata HOM05D000003 ORTHO05D001498 4.4e-06 55.1 105 30.5
CANSAT78G1210 Cannabis sativa HOM05D000003 ORTHO05D000004 4.4e-06 55.1 96 35.4
Sp6g04560 Schrenkiella parvula HOM05D000003 ORTHO05D000006 4.4e-06 55.1 99 28.3
Aa31csc275G20 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.7e-06 54.7 112 24.1
Medtr1g051330 Medicago truncatula HOM05D000003 ORTHO05D000004 5.7e-06 54.7 91 34.1
PSO478G1538 Papaver somniferum HOM05D000003 ORTHO05D000006 5.7e-06 54.7 86 32.6
Aa31LG8G11510 Aethionema arabicum HOM05D000003 ORTHO05D000004 7.4e-06 54.3 115 26.1
BcaC05g28073 Brassica carinata HOM05D000003 ORTHO05D000411 7.4e-06 54.3 81 33.3
Aa31LG4G11780 Aethionema arabicum HOM05D000003 ORTHO05D000006 9.7e-06 53.9 64 32.8
Aa31sc130G60 Aethionema arabicum HOM05D000003 ORTHO05D000006 9.7e-06 53.9 108 27.8
Aa31sc1352G10 Aethionema arabicum HOM05D000003 ORTHO05D000411 9.7e-06 53.9 91 30.8
BcaC09g51548 Brassica carinata HOM05D000003 ORTHO05D000006 9.7e-06 53.9 100 25.0


User provided reference genes

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