Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g25311 Brassica carinata HOM05D000782 ORTHO05D000571 9.6e-86 320.1 157 100.0
BcaB05g25314 Brassica carinata HOM05D000730 ORTHO05D000578 2.4e-60 235.7 186 67.7
A10p28760 Brassica napus HOM05D000782 ORTHO05D000571 1.1e-49 200.3 175 64.6
BcaNung04210 Brassica carinata HOM05D000782 ORTHO05D000571 9.4e-49 197.2 186 60.2
C09p69090 Brassica napus HOM05D000782 ORTHO05D000571 9.4e-49 197.2 186 60.2
BolC9t59652H Brassica oleracea HOM05D000782 ORTHO05D000571 9.4e-49 197.2 186 60.2
BraA10t44923Z Brassica rapa HOM05D000782 ORTHO05D000571 3.9e-47 191.8 176 63.1
Carub.0006s0589 Capsella rubella HOM05D000782 ORTHO05D000571 5.0e-42 174.9 177 53.1
BcaC06g32529 Brassica carinata HOM05D000782 ORTHO05D000571 3.9e-39 165.2 148 64.9
Manes.10G008300 Manihot esculenta HOM05D000782 ORTHO05D000571 4.1e-12 75.5 164 29.3
Nn2g11070 Nelumbo nucifera HOM05D000782 ORTHO05D000571 4.1e-12 75.5 157 33.8
Manes.07G136800 Manihot esculenta HOM05D000782 ORTHO05D000571 3.8e-10 68.9 75 49.3
Oeu017757.1 Olea europaea HOM05D000782 ORTHO05D000571 3.8e-10 68.9 159 27.7
Potri.010G182300 Populus trichocarpa HOM05D000782 ORTHO05D000571 5.0e-10 68.6 59 55.9
Sabra10G0139600 Salix brachista HOM05D000782 ORTHO05D000571 5.0e-10 68.6 159 30.2
Dinv10558 Davidia involucrata HOM05D000782 ORTHO05D000571 2.5e-09 66.2 161 28.0
Duzib114G0053 Durio zibethinus HOM05D000782 ORTHO05D000571 1.6e-08 63.5 66 43.9
Aa31LG10G11060 Aethionema arabicum HOM05D000782 ORTHO05D000571 2.1e-08 63.2 59 47.5
Sabra08G0056100 Salix brachista HOM05D000782 ORTHO05D000571 2.1e-08 63.2 113 31.9
AL5G37500 Arabidopsis lyrata HOM05D000782 ORTHO05D000571 2.8e-08 62.8 59 49.2
CANSAT56G4054 Cannabis sativa HOM05D000782 ORTHO05D000571 2.8e-08 62.8 58 48.3
THA.LOC104810132 Tarenaya hassleriana HOM05D000782 ORTHO05D000571 2.8e-08 62.8 69 42.0
Atru.chr12.135 Acer truncatum HOM05D000782 ORTHO05D000571 3.6e-08 62.4 88 38.6
AT3G56180 Arabidopsis thaliana HOM05D000782 ORTHO05D000571 3.6e-08 62.4 59 49.2
BcaC08g44764 Brassica carinata HOM05D000782 ORTHO05D000571 4.7e-08 62.0 59 47.5
A07p22810 Brassica napus HOM05D000782 ORTHO05D000571 4.7e-08 62.0 59 47.5
A09p49150 Brassica napus HOM05D000782 ORTHO05D000571 4.7e-08 62.0 59 47.5
C06p23360 Brassica napus HOM05D000782 ORTHO05D000571 4.7e-08 62.0 59 47.5
BolC6t37510H Brassica oleracea HOM05D000782 ORTHO05D000571 4.7e-08 62.0 59 47.5
BraA07t29946Z Brassica rapa HOM05D000782 ORTHO05D000571 4.7e-08 62.0 59 47.5
BraA09t40368Z Brassica rapa HOM05D000782 ORTHO05D000571 4.7e-08 62.0 59 47.5
Thecc.10G008100 Theobroma cacao HOM05D000782 ORTHO05D000571 4.7e-08 62.0 66 43.9
C08p31490 Brassica napus HOM05D000782 ORTHO05D000571 6.1e-08 61.6 73 41.1
C08p31500 Brassica napus HOM05D000782 ORTHO05D000571 6.1e-08 61.6 59 47.5
Carub.0005s2296 Capsella rubella HOM05D000782 ORTHO05D000571 6.1e-08 61.6 59 49.2
CARHR166330 Cardamine hirsuta HOM05D000782 ORTHO05D000571 6.1e-08 61.6 59 47.5
Sp5g06320 Schrenkiella parvula HOM05D000782 ORTHO05D000571 6.1e-08 61.6 59 47.5
Ciclev10032774m.g Citrus clementina HOM05D000782 ORTHO05D000571 8.0e-08 61.2 73 38.4
Sabra08G0055600 Salix brachista HOM05D000782 ORTHO05D000571 8.0e-08 61.2 59 47.5
BcaB01g00022 Brassica carinata HOM05D000782 ORTHO05D000571 1.4e-07 60.5 59 47.5
BcaC07g39933 Brassica carinata HOM05D000782 ORTHO05D000571 1.4e-07 60.5 59 45.8
BolC8t50769H Brassica oleracea HOM05D000782 ORTHO05D000571 1.4e-07 60.5 59 45.8
Potri.008G075100 Populus trichocarpa HOM05D000782 ORTHO05D000571 1.4e-07 60.5 59 45.8
Duzib106G0279 Durio zibethinus HOM05D000782 ORTHO05D000571 1.8e-07 60.1 66 40.9
Duzib128G0121 Durio zibethinus HOM05D000782 ORTHO05D000571 1.8e-07 60.1 66 40.9
COL.COLO4_25823 Corchorus olitorius HOM05D000782 ORTHO05D000571 2.3e-07 59.7 59 45.8
Peaxi162Scf00009g00813 Petunia axillaris HOM05D000782 ORTHO05D000571 3.0e-07 59.3 87 36.8
Thecc.10G007400 Theobroma cacao HOM05D000782 ORTHO05D000571 3.0e-07 59.3 138 29.7
FAN05G5695 Fragaria x ananassa HOM05D000782 ORTHO05D000571 4.0e-07 58.9 70 40.0
FAN05G0058 Fragaria x ananassa HOM05D000782 ORTHO05D000571 5.2e-07 58.5 70 40.0
Thhalv10006240m.g Eutrema salsugineum HOM05D000782 ORTHO05D000571 6.8e-07 58.2 59 44.1
FAN14G2230 Fragaria x ananassa HOM05D000782 ORTHO05D000571 6.8e-07 58.2 70 40.0
FvH4_6g10350 Fragaria vesca HOM05D000782 ORTHO05D000571 8.9e-07 57.8 70 40.0
FAN09G0140 Fragaria x ananassa HOM05D000782 ORTHO05D000571 8.9e-07 57.8 70 40.0
Phvul.008G219000 Phaseolus vulgaris HOM05D000782 ORTHO05D000571 8.9e-07 57.8 88 36.4
RcHm_v2.0_Chr3g0461171 Rosa chinensis HOM05D000782 ORTHO05D000571 8.9e-07 57.8 70 40.0
BcaB02g07666 Brassica carinata HOM05D000782 ORTHO05D000571 2.0e-06 56.6 59 42.4
Glyma.U031124 Glycine max HOM05D000782 ORTHO05D000571 2.6e-06 56.2 59 44.1
Manes.10G006900 Manihot esculenta HOM05D000782 ORTHO05D000571 2.6e-06 56.2 141 29.8
Peaxi162Scf00009g00812 Petunia axillaris HOM05D000782 ORTHO05D000571 2.6e-06 56.2 87 36.8
SEGI_32147 Sequoiadendron giganteum HOM05D000782 ORTHO05D000571 2.6e-06 56.2 160 29.4
Sc14g0005600 Simmondsia chinensis HOM05D000782 ORTHO05D000571 2.6e-06 56.2 71 46.5
Peaxi162Scf00284g00121 Petunia axillaris HOM05D000782 ORTHO05D000571 3.4e-06 55.8 164 28.0
AT3G10986 Arabidopsis thaliana HOM05D000782 ORTHO05D000571 4.4e-06 55.5 58 43.1
A04p03980 Brassica napus HOM05D000782 ORTHO05D000571 4.4e-06 55.5 59 40.7
BolC4t25175H Brassica oleracea HOM05D000782 ORTHO05D000571 4.4e-06 55.5 59 40.7
BraA04t16118Z Brassica rapa HOM05D000782 ORTHO05D000571 4.4e-06 55.5 59 40.7
BcaB04g18616 Brassica carinata HOM05D000782 ORTHO05D000571 5.8e-06 55.1 58 43.1
BcaC01g04149 Brassica carinata HOM05D000782 ORTHO05D000571 5.8e-06 55.1 58 41.4
A03p36830 Brassica napus HOM05D000782 ORTHO05D000571 5.8e-06 55.1 58 41.4
C03p44560 Brassica napus HOM05D000782 ORTHO05D000571 5.8e-06 55.1 58 41.4
BolC3t16723H Brassica oleracea HOM05D000782 ORTHO05D000571 5.8e-06 55.1 58 41.4
BraA03t12846Z Brassica rapa HOM05D000782 ORTHO05D000571 5.8e-06 55.1 58 41.4
Cpa.g.sc19.106 Carica papaya HOM05D000782 ORTHO05D000571 5.8e-06 55.1 59 47.5
Sp3g09330 Schrenkiella parvula HOM05D000782 ORTHO05D000571 5.8e-06 55.1 129 30.2
Aqoxy4G00264 Aquilegia oxysepala HOM05D000782 ORTHO05D000571 7.5e-06 54.7 75 36.0
Thhalv10022413m.g Eutrema salsugineum HOM05D000782 ORTHO05D000571 7.5e-06 54.7 127 29.9
SEGI_38654 Sequoiadendron giganteum HOM05D000782 ORTHO05D000571 7.5e-06 54.7 120 33.3
Nitab4.5_0004057g0010 Nicotiana tabacum HOM05D000782 ORTHO05D000571 9.8e-06 54.3 87 35.6


User provided reference genes

Program Settings