Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g25303 Brassica carinata HOM05D004081 ORTHO05D004935 8.5e-63 243.4 117 100.0
BolC2t11999H Brassica oleracea HOM05D004081 ORTHO05D004935 1.7e-42 176.0 89 91.0
BcaB07g29982 Brassica carinata HOM05D004081 ORTHO05D004935 3.7e-42 174.9 89 89.9
BcaC03g17893 Brassica carinata HOM05D004081 ORTHO05D004935 3.7e-42 174.9 89 89.9
Sp2g21850 Schrenkiella parvula HOM05D004081 ORTHO05D004935 6.3e-42 174.1 89 91.0
BcaC03g17895 Brassica carinata HOM05D004081 ORTHO05D004935 3.1e-41 171.8 89 89.9
BolC2t12002H Brassica oleracea HOM05D004081 ORTHO05D004935 3.1e-41 171.8 89 89.9
A09p06100 Brassica napus HOM05D004081 ORTHO05D004935 4.1e-41 171.4 89 88.8
BcaB04g19768 Brassica carinata HOM05D004081 ORTHO05D004935 1.6e-40 169.5 89 87.6
AL6G37640 Arabidopsis lyrata HOM05D002708 ORTHO05D003516 2.0e-40 169.1 89 86.5
Carub.0006s2355 Capsella rubella HOM05D004081 ORTHO05D004935 2.0e-40 169.1 89 86.5
BcaC04g23588 Brassica carinata HOM05D004081 ORTHO05D004935 3.5e-40 168.3 89 86.5
BolC9t53593H Brassica oleracea HOM05D004081 ORTHO05D004935 3.5e-40 168.3 89 86.5
CARHR187640 Cardamine hirsuta HOM05D004081 ORTHO05D004935 4.5e-40 167.9 89 86.5
Thhalv10004493m.g Eutrema salsugineum HOM05D004081 ORTHO05D004935 4.5e-40 167.9 89 85.4
AT5G25770 Arabidopsis thaliana HOM05D004081 ORTHO05D004935 1.3e-39 166.4 89 84.3
Aa31LG11G4780 Aethionema arabicum HOM05D004081 ORTHO05D004935 1.9e-38 162.5 90 84.4
Cpa.g.sc7.252 Carica papaya HOM05D004081 ORTHO05D004935 5.5e-38 161.0 89 82.0
THA.LOC104815055 Tarenaya hassleriana HOM05D004081 ORTHO05D004935 5.5e-38 161.0 89 82.0
Aa31LG11G4770 Aethionema arabicum HOM05D004081 ORTHO05D004935 1.2e-37 159.8 90 82.2
Manes.16G071800 Manihot esculenta HOM05D004081 ORTHO05D004935 1.2e-37 159.8 89 82.0
Sed0008402 Sechium edule HOM05D004081 ORTHO05D004935 1.2e-37 159.8 89 79.8
Ca_15610_v3 Cicer arietinum L. HOM05D004081 ORTHO05D004935 1.6e-37 159.5 89 80.9
Glyma.04G081400 Glycine max HOM05D004081 ORTHO05D004935 1.6e-37 159.5 89 80.9
Thecc.09G041800 Theobroma cacao HOM05D004081 ORTHO05D004935 2.1e-37 159.1 89 79.8
Duzib150G1044 Durio zibethinus HOM05D004081 ORTHO05D004935 2.8e-37 158.7 89 80.9
Nn3g18089 Nelumbo nucifera HOM05D004081 ORTHO05D004935 2.8e-37 158.7 89 78.7
TWI34G1344 Tripterygium wilfordii HOM05D004081 ORTHO05D004935 2.8e-37 158.7 89 82.0
Psat5g023440 Pisum sativum HOM05D004081 ORTHO05D004935 3.6e-37 158.3 89 79.8
Actinidia13318 Actinidia chinensis HOM05D004081 ORTHO05D004935 4.7e-37 157.9 89 78.7
MELO3C003456.2 Cucumis melo HOM05D004081 ORTHO05D004935 6.1e-37 157.5 89 79.8
CsaV3_3G048650 Cucumis sativus L. HOM05D004081 ORTHO05D004935 6.1e-37 157.5 89 79.8
Glyma.06G083100 Glycine max HOM05D004081 ORTHO05D004935 6.1e-37 157.5 89 78.7
CSS0025305 Camellia sinensis var. sinensis HOM05D004081 ORTHO05D004935 8.0e-37 157.1 89 78.7
Duzib168G0078 Durio zibethinus HOM05D004081 ORTHO05D004935 8.0e-37 157.1 89 78.7
TPR.G1357 Trifolium pratense HOM05D004081 ORTHO05D004935 8.0e-37 157.1 89 78.7
CSS0003690 Camellia sinensis var. sinensis HOM05D004081 ORTHO05D004935 1.0e-36 156.8 89 78.7
CSS0039336 Camellia sinensis var. sinensis HOM05D004081 ORTHO05D004935 1.0e-36 156.8 89 78.7
Oeu011271.1 Olea europaea HOM05D004081 ORTHO05D004935 1.0e-36 156.8 89 77.5
Psat5g023320 Pisum sativum HOM05D004081 ORTHO05D004935 1.0e-36 156.8 89 79.8
Potri.006G240600 Populus trichocarpa HOM05D004081 ORTHO05D004935 1.0e-36 156.8 89 79.8
Actinidia31231 Actinidia chinensis HOM05D004081 ORTHO05D004935 1.4e-36 156.4 89 77.5
COL.COLO4_18679 Corchorus olitorius HOM05D004081 ORTHO05D004935 1.4e-36 156.4 89 77.5
Dinv30265 Davidia involucrata HOM05D004081 ORTHO05D004935 1.4e-36 156.4 90 77.8
ClCG11G015230 Citrullus lanatus HOM05D004081 ORTHO05D004935 1.8e-36 156.0 89 79.8
Gohir.D06G093900 Gossypium hirsutum HOM05D004081 ORTHO05D004935 1.8e-36 156.0 89 78.7
Gorai.010G108400 Gossypium raimondii HOM05D004081 ORTHO05D004935 1.8e-36 156.0 89 78.7
Sabra06G0188200 Salix brachista HOM05D004081 ORTHO05D004935 1.8e-36 156.0 89 78.7
PGSC0003DMG400005495 Solanum tuberosum HOM05D004081 ORTHO05D004935 1.8e-36 156.0 89 77.5
vmacro11071 Vaccinium macrocarpon HOM05D004081 ORTHO05D004935 1.8e-36 156.0 89 77.5
CAN.G21.43 Capsicum annuum HOM05D004081 ORTHO05D004935 2.3e-36 155.6 89 77.5
Hma1.2p1_2102F.1_g314030 Hydrangea macrophylla HOM05D004081 ORTHO05D004935 2.3e-36 155.6 89 77.5
MBI01_g30745_MAGBIO Magnolia biondii HOM05D004081 ORTHO05D004935 2.3e-36 155.6 89 76.4
BcaC04g23590 Brassica carinata HOM05D004081 ORTHO05D004935 3.0e-36 155.2 89 83.1
Duzib168G2093 Durio zibethinus HOM05D004081 ORTHO05D004935 4.0e-36 154.8 89 78.7
CAN.G21.42 Capsicum annuum HOM05D004081 ORTHO05D004935 5.2e-36 154.5 89 77.5
Eucgr.E03517 Eucalyptus grandis HOM05D004081 ORTHO05D004935 6.8e-36 154.1 89 77.5
Lalb_Chr08g0243191 Lupinus albus HOM05D004081 ORTHO05D004935 6.8e-36 154.1 89 76.4
CiPaw.07G206000 Carya illinoinensis HOM05D004081 ORTHO05D004935 8.9e-36 153.7 89 77.5
Rhsim02G0180500 Rhododendron simsii HOM05D004081 ORTHO05D004935 8.9e-36 153.7 89 75.3
BolC2t12001H Brassica oleracea HOM05D004081 ORTHO05D004935 1.2e-35 153.3 89 82.0
CAN.G21.41 Capsicum annuum HOM05D004081 ORTHO05D004935 1.2e-35 153.3 89 75.3
Ciclev10009208m.g Citrus clementina HOM05D004081 ORTHO05D004935 1.2e-35 153.3 89 78.7
Gohir.D06G094000 Gossypium hirsutum HOM05D004081 ORTHO05D004935 1.5e-35 152.9 89 76.4
Gorai.010G108500 Gossypium raimondii HOM05D004081 ORTHO05D004935 1.5e-35 152.9 89 76.4
Lj1g0015510 Lotus japonicus HOM05D004081 ORTHO05D004935 1.5e-35 152.9 89 77.5
ATR0315G111 Amborella trichopoda HOM05D004081 ORTHO05D004935 2.0e-35 152.5 89 76.4
Haze_21871 Corylus avellana HOM05D004081 ORTHO05D004935 2.0e-35 152.5 89 77.5
HPP92_021511 Vanilla planifolia HOM05D004081 ORTHO05D004935 2.0e-35 152.5 89 76.4
MSTRG.11708 Avicennia marina HOM05D004081 ORTHO05D004935 2.6e-35 152.1 89 74.2
PGR004G0014 Punica granatum HOM05D004081 ORTHO05D004935 2.6e-35 152.1 89 75.3
Sc23g0006000 Simmondsia chinensis HOM05D004081 ORTHO05D004935 2.6e-35 152.1 89 76.4
TAR383G0460 Trochodendron aralioides HOM05D004081 ORTHO05D004935 2.6e-35 152.1 89 75.3
Cc08_g09170 Coffea canephora HOM05D004081 ORTHO05D004935 3.4e-35 151.8 89 76.4
FAN20G0986 Fragaria x ananassa HOM05D004081 ORTHO05D004935 3.4e-35 151.8 89 75.3
Nitab4.5_0002411g0020 Nicotiana tabacum HOM05D004081 ORTHO05D004935 3.4e-35 151.8 89 77.5
Sc06g0000750 Simmondsia chinensis HOM05D004081 ORTHO05D004935 3.4e-35 151.8 89 75.3
SGA_v2.0_scaffold243G44290 Striga asiatica HOM05D004081 ORTHO05D004935 3.4e-35 151.8 89 74.2
Aqoxy7G01585 Aquilegia oxysepala HOM05D004081 ORTHO05D004935 4.4e-35 151.4 89 75.3
arahy.Tifrunner.gnm1.ann1.QHLN3W Arachis hypogaea HOM05D004081 ORTHO05D004935 4.4e-35 151.4 89 74.2
arahy.Tifrunner.gnm1.ann1.Y1FCW9 Arachis hypogaea HOM05D004081 ORTHO05D004935 4.4e-35 151.4 89 74.2
FvH4_2g35900 Fragaria vesca HOM05D004081 ORTHO05D004935 4.4e-35 151.4 89 75.3
FAN15G1869 Fragaria x ananassa HOM05D004081 ORTHO05D004935 4.4e-35 151.4 89 75.3
FAN27G0952 Fragaria x ananassa HOM05D004081 ORTHO05D004935 4.4e-35 151.4 89 75.3
MD08G1116700 Malus domestica HOM05D004081 ORTHO05D004935 4.4e-35 151.4 89 75.3
Manes.03G062100 Manihot esculenta HOM05D004081 ORTHO05D004935 4.4e-35 151.4 89 75.3
RcHm_v2.0_Chr6g0305921 Rosa chinensis HOM05D004081 ORTHO05D004935 4.4e-35 151.4 89 75.3
Solyc08g068400.4 Solanum lycopersicum HOM05D004081 ORTHO05D004935 4.4e-35 151.4 89 74.2
Sopen08g022280 Solanum pennellii HOM05D004081 ORTHO05D004935 4.4e-35 151.4 89 74.2
Cfa013350 Carpinus fangiana HOM05D004081 ORTHO05D004935 5.7e-35 151.0 89 75.3
Peaxi162Scf00090g00194 Petunia axillaris HOM05D004081 ORTHO05D004935 5.7e-35 151.0 89 74.2
Prupe.1G451100 Prunus persica HOM05D004081 ORTHO05D004935 5.7e-35 151.0 89 74.2
QL12p029513 Quercus lobata HOM05D004081 ORTHO05D004935 5.7e-35 151.0 89 76.4
Rhsim02G0180200 Rhododendron simsii HOM05D001113 ORTHO05D000968 5.7e-35 151.0 89 74.2
CSS0038651 Camellia sinensis var. sinensis HOM05D004081 ORTHO05D004935 7.5e-35 150.6 89 76.4
PGSC0003DMG400020762 Solanum tuberosum HOM05D004081 ORTHO05D004935 7.5e-35 150.6 89 76.4
Phvul.009G106100 Phaseolus vulgaris HOM05D004081 ORTHO05D004935 9.8e-35 150.2 89 74.2
GSVIVG01035653001 Vitis vinifera HOM05D004081 ORTHO05D004935 9.8e-35 150.2 89 76.4
CSS0013583 Camellia sinensis var. sinensis HOM05D004081 ORTHO05D004935 1.3e-34 149.8 93 74.2
DCAR_004492 Daucus carota HOM05D004081 ORTHO05D004935 1.3e-34 149.8 89 71.9
Lsat_1_v5_gn_8_105500 Lactuca sativa HOM05D004081 ORTHO05D004935 1.3e-34 149.8 89 74.2
SalBow4G2011 Salvia bowleyana HOM05D004081 ORTHO05D004935 1.7e-34 149.4 89 74.2
Thecc.09G041700 Theobroma cacao HOM05D004081 ORTHO05D004935 1.7e-34 149.4 89 74.2
VMungo1309G1316 Vigna mungo HOM05D004081 ORTHO05D004935 1.7e-34 149.4 89 74.2
Ah.10g035110 Amaranthus hybridus HOM05D004081 ORTHO05D004935 2.2e-34 149.1 90 76.7
AUR62029665 Chenopodium quinoa HOM05D004081 ORTHO05D004935 2.2e-34 149.1 90 76.7
AUR62041725 Chenopodium quinoa HOM05D004081 ORTHO05D004935 2.2e-34 149.1 90 76.7
Glyma.06G083000 Glycine max HOM05D004081 ORTHO05D004935 2.2e-34 149.1 89 75.3
Nitab4.5_0001499g0090 Nicotiana tabacum HOM05D004081 ORTHO05D004935 2.2e-34 149.1 89 75.3
Glyma.06G083200 Glycine max HOM05D004081 ORTHO05D004935 2.8e-34 148.7 89 75.3
AUR62009311 Chenopodium quinoa HOM05D004081 ORTHO05D004935 3.7e-34 148.3 90 75.6
Migut.A00225 Erythranthe guttata HOM05D004081 ORTHO05D004935 4.9e-34 147.9 89 70.8
Zm00001eb271420 Zea mays HOM05D004081 ORTHO05D004935 4.9e-34 147.9 89 73.0
HanXRQChr16g0510231 Helianthus annuus HOM05D004081 ORTHO05D004935 6.3e-34 147.5 89 70.8
Solyc05g041530.3 Solanum lycopersicum HOM05D004081 ORTHO05D004935 1.1e-33 146.7 89 74.2
CANSAT25G3157 Cannabis sativa HOM05D004081 ORTHO05D004935 1.4e-33 146.4 89 74.2
Hund03409 Selenicereus undatus HOM05D004081 ORTHO05D004935 1.8e-33 146.0 90 75.6
Sopen05g025590 Solanum pennellii HOM05D004081 ORTHO05D004935 1.8e-33 146.0 89 74.2
EL10Ac2g04053 Beta vulgaris HOM05D004081 ORTHO05D004935 2.4e-33 145.6 90 75.6
ECA236G4667 Erigeron canadensis HOM05D004081 ORTHO05D004935 4.1e-33 144.8 89 71.9
PSO566G0156 Papaver somniferum HOM05D004081 ORTHO05D004935 4.1e-33 144.8 89 73.0
Os06g0163200 Oryza sativa ssp. japonica HOM05D004081 ORTHO05D004935 7.0e-33 144.1 89 70.8
Lsat_1_v5_gn_8_104541 Lactuca sativa HOM05D004081 ORTHO05D004935 1.2e-32 143.3 89 70.8
PSO782G5115 Papaver somniferum HOM05D004081 ORTHO05D004935 1.2e-32 143.3 89 71.9
Lsat_1_v5_gn_8_134220 Lactuca sativa HOM05D004081 ORTHO05D004935 2.0e-32 142.5 89 70.8
unitig_748.g7994 Utricularia gibba HOM05D004081 ORTHO05D004935 7.8e-32 140.6 89 73.0
SHI18658 Sapria himalayana HOM05D004081 ORTHO05D004935 2.5e-30 135.6 89 69.7
CSS0028651 Camellia sinensis var. sinensis HOM05D004081 ORTHO05D004935 6.1e-29 131.0 93 66.7
Lj7A705T29 Lonicera japonica HOM05D004081 ORTHO05D004935 1.0e-28 130.2 78 76.9
Phvul.009G105800 Phaseolus vulgaris HOM05D004081 ORTHO05D004935 1.4e-28 129.8 87 67.8
THA.LOC104799704 Tarenaya hassleriana HOM05D004081 ORTHO05D004935 5.2e-28 127.9 89 70.8
AagrBONN_evm.TU.Sc2ySwM_228.1948 Anthoceros agrestis HOM05D004081 ORTHO05D004935 6.8e-28 127.5 93 64.5
THA.LOC104809696 Tarenaya hassleriana HOM05D004081 ORTHO05D004935 2.2e-26 122.5 66 83.3
Mapoly0161s0002 Marchantia polymorpha HOM05D004081 ORTHO05D004935 3.7e-26 121.7 89 60.7
Lsat_1_v5_gn_8_104461 Lactuca sativa HOM05D004081 ORTHO05D004935 6.4e-26 120.9 79 67.1
Phvul.009G107301 Phaseolus vulgaris HOM05D004081 ORTHO05D004935 4.1e-25 118.2 90 60.0
Eucgr.L00922 Eucalyptus grandis HOM05D004081 ORTHO05D004935 9.2e-25 117.1 66 78.8
Gohir.A06G094300 Gossypium hirsutum HOM05D004081 ORTHO05D004935 9.2e-25 117.1 89 64.0
Gohir.A06G094400 Gossypium hirsutum HOM05D004081 ORTHO05D004935 2.0e-24 115.9 102 55.9
Atru.chr7.2143 Acer truncatum HOM05D004081 ORTHO05D004935 3.0e-23 112.1 61 77.0
SMO089G0019 Selaginella moellendorffii HOM05D004081 ORTHO05D004935 3.9e-23 111.7 89 57.3
ATR0121G001 Amborella trichopoda HOM05D004081 ORTHO05D004935 1.5e-22 109.8 93 58.1
Glyma.04G081600 Glycine max HOM05D004081 ORTHO05D004935 2.8e-21 105.5 61 72.1
Lsat_1_v5_gn_8_104800 Lactuca sativa HOM05D004081 ORTHO05D004935 4.7e-21 104.8 89 58.4
Cre16.g676500 Chlamydomonas reinhardtii HOM05D004081 ORTHO05D004935 2.6e-19 99.0 84 46.4
CSS0042840 Camellia sinensis var. sinensis HOM05D004081 ORTHO05D004935 5.8e-19 97.8 89 58.4
VMungo0768G0001 Vigna mungo HOM05D004081 ORTHO05D004935 1.3e-18 96.7 86 53.5
Lsat_1_v5_gn_0_34401 Lactuca sativa HOM05D004081 ORTHO05D004935 1.9e-17 92.8 68 66.2
CAN.G21.44 Capsicum annuum HOM05D004081 ORTHO05D004935 8.6e-15 84.0 118 44.9
MCO09G062 Micromonas commoda HOM05D004081 ORTHO05D004935 5.2e-12 74.7 118 37.3
Lsat_1_v5_gn_8_104201 Lactuca sativa HOM05D004081 ORTHO05D004935 2.9e-10 68.9 43 65.1
Nitab4.5_0000513g0070 Nicotiana tabacum HOM05D004081 ORTHO05D004935 4.1e-09 65.1 67 53.7
PRCOL_00003400 Prasinoderma coloniale HOM05D004081 ORTHO05D004935 9.2e-09 63.9 95 34.7
SEGI_32132 Sequoiadendron giganteum HOM05D004081 ORTHO05D004935 7.8e-08 60.8 35 77.1
Duzib168G0602 Durio zibethinus HOM05D004081 ORTHO05D004935 1.3e-07 60.1 35 71.4
PRCOL_00002146 Prasinoderma coloniale HOM05D004081 ORTHO05D004935 1.5e-06 56.6 95 34.7


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