Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g25295 Brassica carinata HOM05D010710 ORTHO05D090593 4.0e-163 578.2 325 100.0
BcaC06g31258 Brassica carinata HOM05D010710 ORTHO05D095165 5.4e-107 391.7 325 75.7
BraA09t36393Z Brassica rapa HOM05D010710 ORTHO05D021711 8.6e-97 357.8 302 73.2
A09p07390 Brassica napus HOM05D010710 ORTHO05D021711 1.3e-92 344.0 327 67.6
BolC1t00702H Brassica oleracea HOM05D010710 ORTHO05D021711 3.2e-91 339.3 302 69.9
BcaC05g28531 Brassica carinata HOM05D010710 ORTHO05D021711 1.6e-90 337.0 327 67.0
C05p46230 Brassica napus HOM05D010710 ORTHO05D021711 1.0e-89 334.3 327 67.0
BolC9t54809H Brassica oleracea HOM05D010710 ORTHO05D021711 2.6e-77 293.1 227 74.4
BolC8t48287H Brassica oleracea HOM05D010710 ORTHO05D105457 1.9e-75 287.0 278 66.5
C04p46600 Brassica napus HOM05D010710 ORTHO05D028084 1.1e-67 261.2 287 63.4
BcaC01g00375 Brassica carinata HOM05D010710 ORTHO05D091486 1.5e-64 250.8 320 56.6
C01p07100 Brassica napus HOM05D010710 ORTHO05D028084 9.0e-62 241.5 272 61.4
C03p01340 Brassica napus HOM05D010710 ORTHO05D028084 2.7e-58 229.9 297 56.6
BcaC05g29135 Brassica carinata HOM05D010710 ORTHO05D094223 1.1e-54 218.0 302 53.6
BolC3t12692H Brassica oleracea HOM05D010710 ORTHO05D028084 1.1e-43 181.4 250 54.8
C03p79040 Brassica napus HOM05D010710 ORTHO05D100650 3.8e-36 156.4 174 64.4
C05p53750 Brassica napus HOM05D010710 ORTHO05D014876 2.3e-25 120.6 77 80.5
BolC5t33348H Brassica oleracea HOM05D010710 ORTHO05D040883 5.5e-19 99.4 109 63.3
C02p33090 Brassica napus HOM05D008246 ORTHO05D027782 2.6e-08 63.9 143 44.1
BcaNung01471 Brassica carinata HOM05D008717 ORTHO05D021774 1.7e-07 61.2 237 34.2
A05p15340 Brassica napus HOM05D008717 ORTHO05D023883 1.7e-07 61.2 190 37.9
BraA05t20452Z Brassica rapa HOM05D008717 ORTHO05D023883 1.7e-07 61.2 190 37.9
A09p35750 Brassica napus HOM05D008717 ORTHO05D015513 6.3e-07 59.3 189 40.7
BraA09t39098Z Brassica rapa HOM05D008717 ORTHO05D015513 6.3e-07 59.3 189 40.7
BcaC04g20205 Brassica carinata HOM05D008717 ORTHO05D021774 8.2e-07 58.9 175 38.3
BcaC09g48833 Brassica carinata HOM05D008717 ORTHO05D021774 1.8e-06 57.8 160 39.4
BcaB04g19945 Brassica carinata HOM05D008717 ORTHO05D092441 9.1e-06 55.5 157 41.4
BraA05t19688Z Brassica rapa HOM05D008717 ORTHO05D024641 9.1e-06 55.5 144 40.3


User provided reference genes

Program Settings